Entry: PS01358

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General information about the entry

Entry name [info] ZF_RANBP2_1
Accession [info] PS01358
Entry type [info] PATTERN
Date [info] DEC-2001 (CREATED); DEC-2001 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC50199

Name and characterization of the entry

Description [info] Zinc finger RanBP2-type signature.
Pattern [info]
W-x-C-x(2,4)-C-x(3)-N-x(6)-C-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 180 in 104 different sequences
Number of true positive hits 180 in 104 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.36 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
104 sequences

ARI13_ARATH (Q9FFN9), ARI14_ARATH (Q9FFP1), ARI15_ARATH (Q84RQ8), 
ARI16_ARATH (Q9C5A4), ARI8_ARATH  (Q8W468), CAN15_HUMAN (O75808), 
CAN15_MOUSE (Q9JLG8), CAND_DROME  (P27398), CAZ_DROME   (Q27294), 
EWS_HUMAN   (Q01844), EWS_MOUSE   (Q61545), FUS_BOVIN   (Q28009), 
FUS_HUMAN   (P35637), FUS_MOUSE   (P56959), HDA15_ARATH (Q8GXJ1), 
HOIL1_DANRE (A9JTG5), HOIL1_DICLA (E6ZIJ1), HOIL1_HUMAN (Q9BYM8), 
HOIL1_MOUSE (Q9WUB0), HOIL1_RAT   (Q62921), MDM2_CANFA  (P56950), 
MDM2_DANRE  (O42354), MDM2_FELCA  (Q7YRZ8), MDM2_HORSE  (P56951), 
MDM2_HUMAN  (Q00987), MDM2_MESAU  (Q60524), MDM2_MOUSE  (P23804), 
MDM2_XENLA  (P56273), MDM4_BOVIN  (Q2HJ21), MDM4_DANRE  (Q7ZUW7), 
MDM4_HUMAN  (O15151), MDM4_MOUSE  (O35618), MDM4_RAT    (Q5XIN1), 
MDM4_XENLA  (Q7ZYI3), NEIL3_BOVIN (Q3MHN7), NEIL3_HUMAN (Q8TAT5), 
NEIL3_MOUSE (Q8K203), NPL4_DROME  (Q9VBP9), NPL4_HUMAN  (Q8TAT6), 
NPL4_MOUSE  (P60670), NPL4_RAT    (Q9ES54), NRP1_YEAST  (P32770), 
NU153_DROME (Q9VXE6), NU153_HUMAN (P49790), NU153_RAT   (P49791), 
NU153_XENLA (Q640Z6), RBM10_HUMAN (P98175), RBM10_MOUSE (Q99KG3), 
RBM10_RAT   (P70501), RBM5A_XENLA (A0JMV4), RBM5B_XENLA (Q6DDU9), 
RBM5_BOVIN  (Q1RMU5), RBM5_HUMAN  (P52756), RBM5_MOUSE  (Q91YE7), 
RBM5_RAT    (B2GV05), RBM5_XENTR  (A4IGK4), RBP2_HUMAN  (P49792), 
RBP2_MOUSE  (Q9ERU9), RBP2_PANTR  (H2QII6), RBP56_HUMAN (Q92804), 
RNF31_HUMAN (Q96EP0), RNF31_MOUSE (Q924T7), RYBPA_DANRE (Q7SYB3), 
RYBPB_DANRE (Q5EG55), RYBP_HUMAN  (Q8N488), RYBP_MOUSE  (Q8CCI5), 
SHRPN_BOVIN (E1BDF2), SHRPN_HUMAN (Q9H0F6), SHRPN_MOUSE (Q91WA6), 
SHRPN_RAT   (Q9EQL9), TA15B_ARATH (Q94KD0), TAB2_DANRE  (Q5RFW2), 
TAB2_HUMAN  (Q9NYJ8), TAB2_MOUSE  (Q99K90), TAB2_RAT    (Q5U303), 
TAB3_HUMAN  (Q8N5C8), TAB3_MOUSE  (Q571K4), TAB3_XENLA  (Q7ZXH3), 
TAF15_ARATH (Q9AST1), TAMO_DROME  (Q9W1A4), TRBID_DROME (Q9VH90), 
TX13A_HUMAN (Q9BXU3), VAR3_ARATH  (Q8S9K3), Y3761_ARATH (Q8RXW0), 
YAF2_HUMAN  (Q8IY57), YAF2_MOUSE  (Q99LW6), YDMD_SCHPO  (P87143), 
YE04_SCHPO  (O13801), ZRAB2_CHICK (Q5ZLX5), ZRAB2_HUMAN (O95218), 
ZRAB2_MOUSE (Q9R020), ZRAB2_PIG   (Q19QU3), ZRAB2_PONAB (Q5R580), 
ZRAB2_RAT   (O35986), ZRAB3_BOVIN (E1BB03), ZRAB3_HUMAN (Q5FWF4), 
ZRAB3_MOUSE (Q6NZP1), ZRAN1_BOVIN (A6QP16), ZRAN1_HUMAN (Q9UGI0), 
ZRAN1_MOUSE (Q7M760), ZRAN1_XENTR (B1H2Q2), ZRN1A_XENLA (Q5U595), 
ZRN1B_DANRE (A0JMQ9), ZRN1B_XENLA (Q6NUB7)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

VPS36_SCHPO (O43038), VPS36_YEAST (Q06696), YZR3_ARATH  (Q8GZ43)

		
PDB
[Detailed view]
32 PDB

1N0Z; 1NJ3; 1Q5W; 2C6A; 2C6B; 2CR8; 2CRC; 2D9G; 2EBQ; 2EBR; 2EBV; 2GQE; 2K0C; 2K1P; 2LK0; 2LK1; 2WWZ; 2WX0; 2WX1; 3A9J; 3A9K; 3B08; 3B0A; 3CH5; 3G9Y; 3GJ3; 3GJ4; 3GJ5; 3GJ6; 3GJ7; 3GJ8; 4OWF
» More

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