Entry: PS01358

General information about the entry

Entry name [info] ZF_RANBP2_1
Accession [info] PS01358
Entry type [info] PATTERN
Date [info] DEC-2001 (CREATED); DEC-2001 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC50199

Name and characterization of the entry

Description [info] Zinc finger RanBP2-type signature.
Pattern [info]
W-x-C-x(2,4)-C-x(3)-N-x(6)-C-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 182 in 106 different sequences
Number of true positive hits 182 in 106 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.38 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
106 sequences

ARI13_ARATH (Q9FFN9    ), ARI14_ARATH (Q9FFP1    ), ARI15_ARATH (Q84RQ8    ), 
ARI16_ARATH (Q9C5A4    ), ARI8_ARATH  (Q8W468    ), CAN15_HUMAN (O75808    ), 
CAN15_MOUSE (Q9JLG8    ), CAND_DROME  (P27398    ), CAZ_DROME   (Q27294    ), 
EWS_HUMAN   (Q01844    ), EWS_MOUSE   (Q61545    ), FUS_BOVIN   (Q28009    ), 
FUS_HUMAN   (P35637    ), FUS_MOUSE   (P56959    ), HDA15_ARATH (Q8GXJ1    ), 
HOIL1_DANRE (A9JTG5    ), HOIL1_DICLA (E6ZIJ1    ), HOIL1_HUMAN (Q9BYM8    ), 
HOIL1_MOUSE (Q9WUB0    ), HOIL1_RAT   (Q62921    ), MDM2_CANLF  (P56950    ), 
MDM2_DANRE  (O42354    ), MDM2_FELCA  (Q7YRZ8    ), MDM2_HORSE  (P56951    ), 
MDM2_HUMAN  (Q00987    ), MDM2_MESAU  (Q60524    ), MDM2_MOUSE  (P23804    ), 
MDM2_XENLA  (P56273    ), MDM4_BOVIN  (Q2HJ21    ), MDM4_DANRE  (Q7ZUW7    ), 
MDM4_HUMAN  (O15151    ), MDM4_MOUSE  (O35618    ), MDM4_RAT    (Q5XIN1    ), 
MDM4_XENLA  (Q7ZYI3    ), NEIL3_BOVIN (Q3MHN7    ), NEIL3_HUMAN (Q8TAT5    ), 
NEIL3_MOUSE (Q8K203    ), NPL4_DROME  (Q9VBP9    ), NPL4_HUMAN  (Q8TAT6    ), 
NPL4_MOUSE  (P60670    ), NPL4_RAT    (Q9ES54    ), NRP1_YEAST  (P32770    ), 
NU153_DROME (Q9VXE6    ), NU153_HUMAN (P49790    ), NU153_RAT   (P49791    ), 
NU153_XENLA (Q640Z6    ), RBL14_ARATH (Q8RXW0    ), RBM10_HUMAN (P98175    ), 
RBM10_MOUSE (Q99KG3    ), RBM10_RAT   (P70501    ), RBM5A_XENLA (A0JMV4    ), 
RBM5B_XENLA (Q6DDU9    ), RBM5_BOVIN  (Q1RMU5    ), RBM5_HUMAN  (P52756    ), 
RBM5_MOUSE  (Q91YE7    ), RBM5_RAT    (B2GV05    ), RBM5_XENTR  (A4IGK4    ), 
RBP2_HUMAN  (P49792    ), RBP2_MOUSE  (Q9ERU9    ), RBP2_PANTR  (H2QII6    ), 
RBP56_HUMAN (Q92804    ), RNF31_HUMAN (Q96EP0    ), RNF31_MOUSE (Q924T7    ), 
RYBPA_DANRE (Q7SYB3    ), RYBPB_DANRE (Q5EG55    ), RYBP_HUMAN  (Q8N488    ), 
RYBP_MOUSE  (Q8CCI5    ), SHRPN_BOVIN (E1BDF2    ), SHRPN_HUMAN (Q9H0F6    ), 
SHRPN_MOUSE (Q91WA6    ), SHRPN_RAT   (Q9EQL9    ), SUA_ARATH   (F4JCU0    ), 
TA15B_ARATH (Q94KD0    ), TAB2_DANRE  (Q5RFW2    ), TAB2_HUMAN  (Q9NYJ8    ), 
TAB2_MOUSE  (Q99K90    ), TAB2_RAT    (Q5U303    ), TAB3_HUMAN  (Q8N5C8    ), 
TAB3_MOUSE  (Q571K4    ), TAB3_XENLA  (Q7ZXH3    ), TAF15_ARATH (Q9AST1    ), 
TAMO_DROME  (Q9W1A4    ), TRBID_DROME (Q9VH90    ), TX13A_HUMAN (Q9BXU3    ), 
TX13C_HUMAN (A0A0J9YWL9), VAR3_ARATH  (Q8S9K3    ), YAF2_HUMAN  (Q8IY57    ), 
YAF2_MOUSE  (Q99LW6    ), YDMD_SCHPO  (P87143    ), YE04_SCHPO  (O13801    ), 
ZRAB2_CHICK (Q5ZLX5    ), ZRAB2_HUMAN (O95218    ), ZRAB2_MOUSE (Q9R020    ), 
ZRAB2_PIG   (Q19QU3    ), ZRAB2_PONAB (Q5R580    ), ZRAB2_RAT   (O35986    ), 
ZRAB3_BOVIN (E1BB03    ), ZRAB3_HUMAN (Q5FWF4    ), ZRAB3_MOUSE (Q6NZP1    ), 
ZRAN1_BOVIN (A6QP16    ), ZRAN1_HUMAN (Q9UGI0    ), ZRAN1_MOUSE (Q7M760    ), 
ZRAN1_XENTR (B1H2Q2    ), ZRN1A_XENLA (Q5U595    ), ZRN1B_DANRE (A0JMQ9    ), 
ZRN1B_XENLA (Q6NUB7    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

VPS36_SCHPO (O43038    ), VPS36_YEAST (Q06696    ), YZR3_ARATH  (Q8GZ43    )

		
PDB
[Detailed view]
36 PDB

1N0Z; 1NJ3; 1Q5W; 2C6A; 2C6B; 2CR8; 2CRC; 2D9G; 2EBQ; 2EBR; 2EBV; 2GQE; 2K0C; 2K1P; 2LK0; 2LK1; 2MXV; 2WWZ; 2WX0; 2WX1; 3A9J; 3A9K; 3B08; 3B0A; 3CH5; 3G9Y; 3GJ3; 3GJ4; 3GJ5; 3GJ6; 3GJ7; 3GJ8; 4OWF; 4S1Z; 4XXB; 5AF6
» more

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