Entry: PS01359

Forthcoming changes to the profile format
General information about the entry

Entry name [info] ZF_PHD_1
Accession [info] PS01359
Entry type [info] PATTERN
Date [info] APR-2002 (CREATED); JAN-2003 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC50016

Name and characterization of the entry

Description [info] Zinc finger PHD-type signature.
Pattern [info]
C-x(1,2)-C-x(5,45)-[VMFLWIE]-x-C-x(1,4)-C-x(1,4)-[WYFVQHLT]-H-x(2)-C-
x(5,45)-[WFLYI]-x-C-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.


Total number of hits 451 in 370 different sequences
Number of true positive hits 442 in 361 different sequences
Number of 'unknown' hits
Number of false positive hits 9 in 9 different sequences
Number of false negative sequences 76
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.00 %
Recall (true positives / (true positives + false negatives)) 85.33 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
361 sequences

AF10_HUMAN  (P55197), AF10_MOUSE  (O54826), AF17_HUMAN  (P55198), 
AIRE_HUMAN  (O43918), AIRE_MOUSE  (Q9Z0E3), ALFIN_MEDSA (Q40359), 
ALFL1_ARATH (Q9FFF5), ALFL1_ORYSI (A2Y0Q2), ALFL1_ORYSJ (Q75IR6), 
ALFL2_ARATH (Q9SRM4), ALFL2_ORYSI (B8B8I3), ALFL2_ORYSJ (Q8H383), 
ALFL3_ARATH (Q9M2B4), ALFL3_ORYSI (B8AMA8), ALFL3_ORYSJ (Q84TV4), 
ALFL4_ARATH (O81488), ALFL4_ORYSI (A2XTW9), ALFL4_ORYSJ (Q7XUW3), 
ALFL5_ARATH (Q5XEM9), ALFL5_ORYSI (A2Y4R8), ALFL5_ORYSJ (Q60DW3), 
ALFL6_ARATH (Q8S8M9), ALFL6_ORYSI (A2WXR5), ALFL6_ORYSJ (Q7F2Z1), 
ALFL7_ARATH (Q8LA16), ALFL7_ORYSI (B8ADZ3), ALFL7_ORYSJ (Q6Z7F4), 
ALFL8_ORYSI (B8BJV8), ALFL8_ORYSJ (Q2R837), ALFL9_ORYSI (B8B8C5), 
ALFL9_ORYSJ (Q6YTY3), ASH1L_HUMAN (Q9NR48), ASH1L_MOUSE (Q99MY8), 
ASH1_DROME  (Q9VW15), ASH2_DROME  (Q94545), ASH2_SCHPO  (O60070), 
ASHR3_ARATH (Q949T8), ATG35_PICPG (C4QVX6), ATX1_ARATH  (Q9C5X4), 
ATX2_ARATH  (P0CB22), ATX3_ARATH  (Q9M364), ATX4_ARATH  (Q9SUE7), 
ATX5_ARATH  (Q8GZ42), ATXR5_ARATH (Q8VZJ1), ATXR5_RICCO (B9RU15), 
ATXR6_ARATH (Q9FNE9), BAZ1A_HUMAN (Q9NRL2), BAZ1A_MOUSE (O88379), 
BAZ1A_XENLA (Q8UVR5), BAZ1B_DANRE (A2BIL7), BAZ1B_HUMAN (Q9UIG0), 
BAZ1B_MOUSE (Q9Z277), BAZ1B_XENLA (A8DZJ1), BPTF_HUMAN  (Q12830), 
BRD1_HUMAN  (O95696), BRPF1_HUMAN (P55201), BRPF3_HUMAN (Q9ULD4), 
BYE1_CANGA  (Q6FJ00), BYE1_DEBHA  (Q6BNY5), BYE1_PICGU  (A5DDB7), 
BYE1_SCHPO  (Q9Y7V2), BYE1_YARLI  (Q6C0K9), BYE1_YEAS7  (A6ZZW1), 
BYE1_YEAST  (P36106), C3H19_ARATH (Q9SIV5), C3H44_ARATH (Q9SD34), 
CBP1_CAEEL  (P34545), CHD3_CAEEL  (Q22516), CHD3_DROME  (O16102), 
CHD3_HUMAN  (Q12873), CHD4_HUMAN  (Q14839), CHD4_MOUSE  (Q6PDQ2), 
CHD5_HUMAN  (Q8TDI0), CHD5_MOUSE  (A2A8L1), CHD5_RAT    (D3ZD32), 
CHDM_DROME  (O97159), CHR4_ARATH  (F4KBP5), CTI6_SCHPO  (Q1MTR4), 
CTI6_YEAST  (Q08923), CXXC1_BOVIN (Q5EA28), CXXC1_DROME (Q9W352), 
CXXC1_HUMAN (Q9P0U4), CXXC1_MOUSE (Q9CWW7), DIDO1_HUMAN (Q9BTC0), 
DIDO1_MOUSE (Q8C9B9), DPF1_CHICK  (P58267), DPF1_HUMAN  (Q92782), 
DPF1_MOUSE  (Q9QX66), DPF1_RAT    (P56163), DPF3_CHICK  (P58270), 
DPF3_DANRE  (A9LMC0), DPF3_HUMAN  (Q92784), DPF3_MOUSE  (P58269), 
ECM5_YEAST  (Q03214), FXL19_HUMAN (Q6PCT2), FXL19_MOUSE (Q6PB97), 
G2E3_HUMAN  (Q7L622), G2E3_MACFA  (Q4R9C4), G2E3_MOUSE  (Q5RJY2), 
HAC12_ARATH (Q9FWQ5), HAC1_ARATH  (Q9C5X9), HAC2_ARATH  (Q9FYH1), 
HAC4_ARATH  (Q9LG11), HAC5_ARATH  (Q9LE42), HACL1_ORYSJ (Q6YXY2), 
HACL3_ORYSJ (Q9XHY7), HAT31_ARATH (Q04996), HOP1_SCHPO  (Q9P7P2), 
HOX1A_MAIZE (P46605), ING1_ARATH  (Q9LIQ6), ING1_HUMAN  (Q9UK53), 
ING1_MOUSE  (Q9QXV3), ING1_SCHPO  (O42871), ING2_HUMAN  (Q9H160), 
ING2_MOUSE  (Q9ESK4), ING2_SCHPO  (O74736), ING3_CHICK  (Q5ZK36), 
ING3_HUMAN  (Q9NXR8), ING3_MOUSE  (Q8VEK6), ING3_PONAB  (Q5RBA1), 
ING3_RAT    (Q498T3), ING3_XENLA  (Q7ZX31), ING3_XENTR  (Q66KD5), 
ING4_BOVIN  (Q3T095), ING4_CHICK  (Q5ZKY4), ING4_HUMAN  (Q9UNL4), 
ING4_MOUSE  (Q8C0D7), ING5_HUMAN  (Q8WYH8), ING5_MOUSE  (Q9D8Y8), 
INT12_BOVIN (Q32LL5), INT12_DANRE (Q6IQU7), INT12_HUMAN (Q96CB8), 
INT12_MACFA (Q8WNV2), INT12_MOUSE (Q9D168), INT12_PONAB (Q5RCV7), 
INT12_RAT   (Q68FR3), INT12_XENLA (Q6DJM6), INT12_XENTR (Q0V9U1), 
JADE1_BOVIN (Q5E9T7), JADE1_DANRE (Q803A0), JADE1_HUMAN (Q6IE81), 
JADE1_MOUSE (Q6ZPI0), JADE1_XENLA (Q6GQJ2), JADE2_HUMAN (Q9NQC1), 
JADE2_MOUSE (Q6ZQF7), JADE3_DANRE (Q7ZVP1), JADE3_HUMAN (Q92613), 
JADE3_MOUSE (Q6IE82), JADE3_XENTR (Q0P4S5), JHD1_ASPFU  (Q4WHB7), 
JHD1_CANAL  (Q5A847), JHD1_CRYNB  (P0CO41), JHD1_CRYNJ  (P0CO40), 
JHD1_DEBHA  (Q6BXJ4), JHD1_EMENI  (Q5AW75), JHD1_USTMA  (Q4P5U1), 
JHD2_YEAST  (P47156), K1045_HUMAN (Q9UPV7), K1045_MOUSE (Q80TL4), 
K1045_PONAB (Q5R4R7), KAT6A_HUMAN (Q92794), KAT6A_MOUSE (Q8BZ21), 
KAT6A_RAT   (Q5TKR9), KAT6B_HUMAN (Q8WYB5), KAT6B_MACFA (Q8WML3), 
KAT6B_MOUSE (Q8BRB7), KD5BB_DANRE (Q6IQX0), KDM2A_HUMAN (Q9Y2K7), 
KDM2A_MOUSE (P59997), KDM2A_XENTR (Q5U263), KDM5A_HUMAN (P29375), 
KDM5A_MOUSE (Q3UXZ9), KDM5B_CHICK (Q5F3R2), KDM5B_HUMAN (Q9UGL1), 
KDM5B_MOUSE (Q80Y84), KDM5C_CANFA (Q38JA7), KDM5C_HUMAN (P41229), 
KDM5C_MOUSE (P41230), KDM5C_PIG   (A1YVX4), KDM5D_CANFA (Q30DN6), 
KDM5D_HUMAN (Q9BY66), KDM5D_MOUSE (Q62240), KDM5D_PANTR (Q5XUN4), 
KDM5_CAEBR  (Q61T02), KDM5_CAEEL  (Q23541), KDM5_DROME  (Q9VMJ7), 
KDM7A_DANRE (Q5RHD1), KDM7A_HUMAN (Q6ZMT4), KDM7A_MOUSE (Q3UWM4), 
KDM7A_XENTR (Q08D35), KDM7B_DANRE (P0CF52), KDM7_CAEEL  (Q9GYI0), 
KMT2A_HUMAN (Q03164), KMT2A_MOUSE (P55200), KMT2B_HUMAN (Q9UMN6), 
KMT2B_MOUSE (O08550), KMT2C_HUMAN (Q8NEZ4), KMT2C_MOUSE (Q8BRH4), 
KMT2D_HUMAN (O14686), KMT2D_MOUSE (Q6PDK2), KMT2E_HUMAN (Q8IZD2), 
KMT2E_MOUSE (Q3UG20), LE418_CAEEL (G5EBZ4), LID2_SCHPO  (Q9HDV4), 
LIN49_CAEEL (Q20318), LIN59_CAEEL (O44757), MBD9_ARATH  (Q9SGH2), 
MES4_DROME  (Q8MT36), MIT1_SCHPO  (Q9P793), MLO2_SCHPO  (Q09329), 
MMD1_ARATH  (Q7X6Y7), MS1_ARATH   (Q9FMS5), MSC1_SCHPO  (Q9UT79), 
MTF2_HUMAN  (Q9Y483), MTF2_MOUSE  (Q02395), MTF2_PONAB  (Q5R7T9), 
NFXL1_ARATH (Q9SY59), NFXL2_ARATH (Q9FFK8), NSD1_HUMAN  (Q96L73), 
NSD1_MOUSE  (O88491), NSD2_HUMAN  (O96028), NSD2_MOUSE  (Q8BVE8), 
NSD3_HUMAN  (Q9BZ95), NSD3_MOUSE  (Q6P2L6), NTO1_SCHPO  (O74759), 
NTO1_YEAST  (Q12311), NU301_CAEEL (Q6BER5), NU301_DROME (Q9W0T1), 
OBE1_ARATH  (Q9S736), OBE2_ARATH  (Q9LUB7), ORTH1_ARATH (Q9FKA7), 
ORTH2_ARATH (Q8VYZ0), ORTH3_ARATH (Q9FVS2), ORTH4_ARATH (Q9C8E1), 
ORTH5_ARATH (Q680I0), P20L1_HUMAN (A8MW92), P20L1_MOUSE (Q8CCJ9), 
P20L1_RAT   (Q4V9H5), PCL_DROME   (Q24459), PF21A_HUMAN (Q96BD5), 
PF21A_MOUSE (Q6ZPK0), PF23A_DANRE (Q5BJ10), PF23A_XENLA (Q5HZN9), 
PF23B_DANRE (Q7SXB5), PF23B_XENLA (Q0IHB0), PHF10_BOVIN (Q2T9V9), 
PHF10_DANRE (Q6NWE1), PHF10_HUMAN (Q8WUB8), PHF10_MOUSE (Q9D8M7), 
PHF10_RAT   (Q4V7A6), PHF10_XENLA (Q63ZP1), PHF12_HUMAN (Q96QT6), 
PHF12_MOUSE (Q5SPL2), PHF14_HUMAN (O94880), PHF14_MOUSE (Q9D4H9), 
PHF19_HUMAN (Q5T6S3), PHF19_MOUSE (Q9CXG9), PHF1_HUMAN  (O43189), 
PHF1_MOUSE  (Q9Z1B8), PHF1_SCHPO  (P87233), PHF20_HUMAN (Q9BVI0), 
PHF20_MOUSE (Q8BLG0), PHF23_XENTR (Q5U5E5), PHF2_DANRE  (Q6P949), 
PHF2_DICLA  (E6ZGB4), PHF2_HUMAN  (O75151), PHF2_MOUSE  (Q9WTU0), 
PHF2_SCHPO  (Q09908), PHF3_HUMAN  (Q92576), PHF8_DANRE  (P0CH95), 
PHF8_HUMAN  (Q9UPP1), PHF8_MOUSE  (Q80TJ7), PHO23_YEAST (P50947), 
PHRF1_HUMAN (Q9P1Y6), PHRF1_MOUSE (A6H619), PHRF1_RAT   (Q63625), 
PKCB1_HUMAN (Q9ULU4), PKL_ARATH   (Q9S775), PRH_ARATH   (P48785), 
PRH_PETCR   (P48786), PVIP_NICBE  (Q84N38), PVIP_PEA    (Q84N37), 
PYGO1_HUMAN (Q9Y3Y4), PYGO1_MOUSE (Q9D0P5), PYGO2_HUMAN (Q9BRQ0), 
PYGO_DROME  (Q9V9W8), RCO1_YEAST  (Q04779), REQUA_XENLA (Q9W638), 
REQUB_XENLA (Q9W636), REQU_CHICK  (P58268), REQU_HUMAN  (Q92785), 
REQU_MOUSE  (Q61103), RNO_DROME   (Q7YZH1), RNO_DROPS   (Q29EQ3), 
RSF1_HUMAN  (Q96T23), SAYP_DROME  (Q9VWF2), SET1_PLAF7  (C6KTD2), 
SET3_SCHPO  (Q10362), SET3_YEAST  (P36124), SET4_YEAST  (P42948), 
SHPRH_HUMAN (Q149N8), SHPRH_MOUSE (Q7TPQ3), SIZ1_ARATH  (Q680Q4), 
SIZ1_ORYSJ  (Q6L4L4), SIZ2_ORYSJ  (Q6ASW7), SNT2_SCHPO  (Q10077), 
SNT2_YEAST  (P53127), SP110_HUMAN (Q9HB58), SP140_HUMAN (Q13342), 
SP14L_HUMAN (Q9H930), SPP1_SCHPO  (O74508), SPP1_YEAST  (Q03012), 
TAF3_CHICK  (Q5F489), TAF3_HUMAN  (Q5VWG9), TAF3_MOUSE  (Q5HZG4), 
TAF3_XENLA  (Q5EAW9), TCF19_HUMAN (Q9Y242), TCF19_MACMU (Q5TM48), 
TCF19_PANTR (Q7YR48), TCF19_PIG   (Q9TSV4), TIF1A_HUMAN (O15164), 
TIF1A_MOUSE (Q64127), TIF1B_HUMAN (Q13263), TIF1B_MOUSE (Q62318), 
TIF1B_RAT   (O08629), TRI33_DANRE (Q6E2N3), TRI33_HUMAN (Q9UPN9), 
TRI33_MOUSE (Q99PP7), TRI33_XENLA (Q56R14), TRI66_HUMAN (O15016), 
TRI66_MOUSE (Q924W6), TRX_DROME   (P20659), TRX_DROVI   (Q24742), 
UBR7_DICDI  (Q54DV0), UHRF1_BOVIN (A7E320), UHRF1_DANRE (E7EZF3), 
UHRF1_HUMAN (Q96T88), UHRF1_MOUSE (Q8VDF2), UHRF1_RAT   (Q7TPK1), 
UHRF1_XENLA (B6CHA3), UHRF1_XENTR (F6UA42), UHRF2_HUMAN (Q96PU4), 
UHRF2_MOUSE (Q7TMI3), Y1342_ARATH (Q9C810), Y2181_ARATH (Q9ZUA9), 
Y3228_ARATH (Q5PNS0), Y8158_DICDI (Q55FD6), YA27_SCHPO  (Q09698), 
YAC5_SCHPO  (Q09819), YM2A_CAEEL  (P34447), YNG2_ASHGO  (Q757W2), 
YNG2_CANAL  (Q5AHB8), YNG2_CANGA  (Q6FSB1), YNG2_DEBHA  (Q6BNL6), 
YNG2_KLULA  (Q6CXN0), YNG2_YARLI  (Q6C5V7), YNG2_YEAST  (P38806), 
YP99_CAEEL  (Q09477), YQF7_SCHPO  (O94400), ZMY11_HUMAN (Q15326), 
ZMY11_MOUSE (Q8R5C8)
» More

UniProtKB/Swiss-Prot
False negative sequences
76 sequences

ARID4_ARATH (Q6NQ79), ASH2L_HUMAN (Q9UBL3), ASH2L_MOUSE (Q91X20), 
ASXL1_HUMAN (Q8IXJ9), ASXL1_MOUSE (P59598), ASXL2_CHICK (Q5ZM88), 
ASXL2_HUMAN (Q76L83), ASXL2_MOUSE (Q8BZ32), ASXL3_HUMAN (Q9C0F0), 
ASXL3_MOUSE (Q8C4A5), ASX_DROME   (Q9V727), BAZ2A_HUMAN (Q9UIF9), 
BAZ2A_MOUSE (Q91YE5), BAZ2A_XENLA (B7ZS37), BAZ2B_CHICK (Q9DE13), 
BAZ2B_HUMAN (Q9UIF8), G2E3_CHICK  (Q5F4A1), HACL2_ORYSJ (Q5Z8V7), 
ING2_ARATH  (B3H615), JHD1_ASHGO  (Q75AL5), JHD1_KLULA  (Q6CIC9), 
JHD1_YARLI  (Q6C423), JHD1_YEAST  (P40034), KDM2B_HUMAN (Q8NHM5), 
KDM2B_MOUSE (Q6P1G2), KDM2B_XENLA (Q640I9), KDM4A_HUMAN (O75164), 
KDM4A_MOUSE (Q8BW72), KDM4A_PONAB (Q5RD88), KDM4B_HUMAN (O94953), 
KDM4B_MOUSE (Q91VY5), KDM4C_HUMAN (Q9H3R0), KDM4C_MOUSE (Q8VCD7), 
MES4_CAEEL  (Q9NH52), OBE3_ARATH  (Q94B71), OBE4_ARATH  (Q84TI3), 
PF21B_HUMAN (Q96EK2), PF21B_MOUSE (Q8C966), PH11A_MOUSE (Q8BVM9), 
PH11L_RAT   (Q5I0J8), PHF11_BOVIN (Q2HJ93), PHF11_HUMAN (Q9UIL8), 
PHF11_MOUSE (A6H5X4), PHF11_RAT   (Q5I0E2), PHF13_HUMAN (Q86YI8), 
PHF13_MOUSE (Q8K2W6), PHF23_BOVIN (A5D962), PHF23_HUMAN (Q9BUL5), 
PHF23_MOUSE (Q8BSN5), PHF23_RAT   (Q6AY75), PHF6_BOVIN  (Q08DR0), 
PHF6_HUMAN  (Q8IWS0), PHF6_MOUSE  (Q9D4J7), PHF6_PONAB  (Q5R5Z2), 
PHF7_HUMAN  (Q9BWX1), PHF7_MOUSE  (Q9DAG9), PHF7_RAT    (Q6AXW4), 
RAG2_CHICK  (P25022), RAG2_DANRE  (O13034), RAG2_HUMAN  (P55895), 
RAG2_MOUSE  (P21784), RAG2_ONCMY  (Q91193), RAG2_RABIT  (P34089), 
RAG2_XENLA  (Q91830), RAI1_HUMAN  (Q7Z5J4), RAI1_MOUSE  (Q61818), 
SETVS_PLAF7 (Q8IE95), TCF20_HUMAN (Q9UGU0), TCF20_MOUSE (Q9EPQ8), 
UBR7_HUMAN  (Q8N806), UBR7_MOUSE  (Q8BU04), VIL1_ARATH  (Q9LHF5), 
VIL2_ARATH  (Q9SUM4), VIL3_ARATH  (Q5BPT4), VIN3_ARATH  (Q9FIE3), 
YNG1_YEAST  (Q08465)
» More

UniProtKB/Swiss-Prot
False positive sequences
9 sequences

ASR1_YEAST  (Q06834), FAP1H_SCHPO (O74853), NFX1_BOVIN  (A6QLA0), 
NFX1_DICDI  (Q54BK0), NFX1_HUMAN  (Q12986), NFX1_MOUSE  (B1AY10), 
NFXL1_HUMAN (Q6ZNB6), NFXL1_XENLA (A0JMY5), STC_DROME   (P40798)
» More


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission