Entry: PS50005
General information about the entry
Entry nameTPR
Accession numberPS50005
Entry typeMATRIX
DateJAN-2004 (CREATED); JAN-2004 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC50005
Associated ProRulePRU00339
Name and characterization of the entry
DescriptionTPR repeat profile.
Matrix / Profile
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=34; TOPOLOGY=LINEAR;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=34;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3014; R2=0.0295; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=159; N_SCORE=8.0; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=216; N_SCORE=5.0; MODE=1; TEXT='R?';
/DEFAULT: D=-20; I=-20; B0=-100; B1=-200; E0=-100; E1=-200; MI=-105; MD=-50; IM=-105; DM=-50;

                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0;
/M: SY='A'; M=  9,-12,-19,-15, -8,-14,-13,-14, -6,-12,-11, -8,-10, -1, -9,-15,  2,  0, -4,-20,-12,-10; D=-4;
/M: SY='E'; M= -7,  1,-24,  1,  7,-17,-16, -7,-16,  1,-14,-11,  0,-13,  2, -1, -2, -5,-14,-20, -9,  4; D=-4;
/M: SY='A'; M= 10,-15,-15,-20,-13, -9,-14,-19,  1,-14, -1, -1,-12,-16,-12,-16, -1,  2,  5,-22,-11,-13; D=-4;
/M: SY='W'; M=-14,-22,-27,-23,-17,  8,-24, -1, -4,-15,  3,  0,-20,-25,-11,-12,-22,-14,-10, 25, 24,-14; D=-4;
/M: SY='Y'; M= -9,-12,-14,-16,-12,  4,-21, -8, -5,-10, -3, -3, -8,-22,-10, -7, -8, -3, -5,-14,  8,-12; D=-4;
/M: SY='N'; M= -8, -1,-21, -4, -2,-15, -9, -2,-15, -3,-11, -7,  5,-18, -1,  0, -4, -6,-15,-23, -8, -2; D=-4;
/M: SY='L'; M= -9,-21,-23,-23,-14, -1,-26,-14,  9,-13, 18, 11,-18,-23, -9, -4,-18, -8,  5,-18, -2,-13; D=-4;
/M: SY='G'; M= 13, -9,-23,-12,-16,-25, 44,-19,-29,-16,-24,-16, -2,-17,-16,-19,  4,-12,-20,-21,-26,-16; D=-4;
/M: SY='Q'; M= -5, -4,-21, -8, -2,-15,-18,  0, -8, -4, -6, -1, -2,-17,  1, -2, -5, -4, -9,-24, -6, -1;
/M: SY='V'; M=  2,-17, -6,-21,-14, -5,-21,-17,  2,-15,  4,  2,-16,-21,-13,-15, -7, -3,  5,-23, -7,-14;
/M: SY='Y'; M=-12,-16,-23,-18,-14, 14,-23,  9, -6,-12, -1, -1,-14,-25, -9,-10,-14,-10,-10,  5, 35,-13;
/M: SY='F'; M= -7,-15,-20,-17,-10,  3,-21, -9, -2,-10,  2,  2,-12,-20,-10, -7, -9, -4, -2,-16,  2,-10;
/M: SY='K'; M= -3, -2,-23, -2,  5,-21,-15, -6,-17,  7,-15, -8, -1,-13,  6,  4, -1, -4,-14,-23,-10,  5;
/M: SY='M'; M= -6, -9,-19,-12, -3,-12,-20, -7, -4, -4,  1,  4, -8,-18,  1, -3, -7, -3, -5,-24, -7, -2;
/M: SY='G'; M= -5,  3,-27,  3,  1,-28, 19, -7,-31, -1,-26,-16,  7,-15, -2, -3,  1,-11,-25,-25,-20, -1;
/M: SY='D'; M=-13, 18,-27, 21, 15,-28,-14,  2,-26, 10,-23,-15, 14,-12, 11,  6, -1, -8,-25,-29,-14, 13;
/M: SY='Y'; M=-14,-19,-25,-21,-16, 16,-25,  2, -1,-14,  2,  2,-15,-21,-13,-11,-15, -8, -5,  1, 26,-16;
/M: SY='D'; M= -6, 12,-25, 17, 17,-29,-13, -3,-25,  5,-23,-16,  6, -6,  8, -1,  3, -4,-21,-31,-17, 12;
/M: SY='E'; M= -5,  2,-26,  3, 15,-23,-17, -6,-19, 11,-15, -9,  0,-11, 10,  5, -4, -7,-18,-24,-12, 12;
/M: SY='A'; M= 42, -9, -9,-18,-10,-19,  0,-19,-11,-11,-12,-11, -8,-11,-10,-19, 12,  2, -1,-22,-19,-10;
/M: SY='I'; M= -6,-19,-24,-22,-11, -3,-27,-17, 13,-14, 12,  8,-17,-20,-11,-12,-15, -7,  8,-19, -1,-13;
/M: SY='E'; M= -6,  8,-26, 10, 17,-25,-16, -3,-23, 10,-19,-12,  4, -9, 11,  4,  0, -5,-20,-27,-13, 14;
/M: SY='Y'; M= -3, -7, -9, -9, -9, -4,-18, -2,-11,-13, -7, -6, -7,-21, -8,-13, -6, -6, -9,-16,  6,-10;
/M: SY='F'; M=-16,-25,-20,-30,-24, 42,-28, -7,  2,-23, 11,  3,-21,-29,-24,-17,-20, -9, -2,  9, 36,-24;
/M: SY='Q'; M= -9,  3,-24,  3, 11,-22,-16,  1,-21,  7,-17, -9,  4,-13, 12,  8,  1, -2,-19,-26,-10, 11;
/M: SY='K'; M= -8, -1,-26, -1, 12,-25,-18, -3,-24, 21,-21,-10,  0,-11, 13, 20, -3, -5,-19,-22,-11, 11;
/M: SY='A'; M= 25,-15, -5,-21,-15,-14, -9,-21, -2,-15, -3, -4,-13,-17,-14,-20,  4,  0,  6,-25,-16,-15;
/M: SY='L'; M= -7,-25,-20,-28,-20,  1,-29,-17, 19,-22, 23, 14,-22,-25,-16,-17,-19, -7, 14,-20, -1,-19;
/M: SY='E'; M= -4,  4,-23,  6, 13,-24,-14, -5,-22,  8,-19,-12,  3,-11,  8,  6,  3, -2,-17,-27,-14, 10;
/M: SY='L'; M= -7,-21,-19,-24,-15, -1,-25,-16, 11,-17, 19, 10,-19,-24,-12,-12,-17, -7,  7,-19, -3,-15;
/M: SY='D'; M= -8, 16,-23, 16,  7,-21,-13, -1,-21,  0,-18,-15, 12,-14,  1, -4,  0, -5,-19,-29,-12,  4;
/M: SY='P'; M= -8,-12,-34, -6,  5,-27,-18,-14,-20, -3,-26,-16,-12, 50, -3, -9, -5, -7,-24,-29,-23, -3;
/M: SY='N'; M= -9, 10,-23,  9,  5,-19,-11,  1,-22,  2,-21,-14, 11,-14,  2,  0,  2, -2,-20,-25, -8,  3;
/M: SY='N'; M=-10,  9,-22,  6,  0,-14,-12,  3,-18, -4,-16,-11, 12,-13, -3, -3, -1, -4,-18,-26, -9, -2;
/I:         E1=0;
Post-processing
COMPETES_SEQ_WITH: PS51375;
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 3155 hits in 781 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 3101 hits in 767 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 54 hits in 14 different sequences
  • Number of known missed hits: 366
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 98.29 %
  • Recall (true hits / (true hits + false negatives)): 89.44 %
Comments
  • MATRIX_TYPE: protein_domain
  • Scaling database: UniProtKB/Swiss-Prot: reversed
  • Matrix author: K_Hofmann, N_Hulo
  • Taxonomic range: Archaebacteria, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
  • Maximum known number of repetitions of the pattern in a single protein: 25
  • FT_KEY: REPEAT
  • FT_DESC: TPR
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
ACSC_GLUXY  (P37718), AFSR_STRCO  (P25941), AIPL1_MOUSE (Q924K1), 
AIPL1_RAT   (Q9JLG9), AIP_BOVIN   (Q7YRC1), AIP_CHLAE   (O97628), 
AIP_HUMAN   (O00170), AIP_MOUSE   (O08915), AIP_RAT     (Q5FWY5), 
ANM10_HUMAN (Q6P2P2), ANM10_MOUSE (Q3U3W5), ANM10_XENLA (A0JMU5), 
APBP2_HUMAN (Q92624), APBP2_MOUSE (Q9DAX9), APBP2_RAT   (A5HK05), 
APC3_DICDI  (Q54J83), APC3_SCHPO  (P10505), APC7_ARATH  (Q8VY89), 
APC7_DICDI  (Q54D58), APC7_HUMAN  (Q9UJX3), APC7_MOUSE  (Q9WVM3), 
APC8_SCHPO  (O94556), ASPH_BOVIN  (Q28056), ASPH_HUMAN  (Q12797), 
ASPH_MOUSE  (Q8BSY0), BBS4_BOVIN  (Q1JQ97), BBS4_CAEEL  (Q5CZ52), 
BBS4_DROME  (A1Z8E9), BBS4_HUMAN  (Q96RK4), BBS4_MOUSE  (Q8C1Z7), 
BBS4_XENTR  (Q28G25), BCSC1_GLUXY (P19450), BCSC2_GLUXY (O82861), 
BCSC3_GLUXY (Q9WX63), BCSC4_GLUXY (Q9WX71), BCSC_ECO57  (Q8X5M0), 
BCSC_ECOLI  (P37650), BCSC_PSEFS  (P58937), BCSC_SALTY  (Q8ZLB8), 
BCSC_XANAC  (P58938), BIMA_EMENI  (P17885), CABIN_HUMAN (Q9Y6J0), 
CABIN_RAT   (O88480), CCMH_ECOLI  (P0ABM9), CCMH_HAEIN  (P46458), 
CCMH_SHIFL  (P0ABN0), CD27A_ARATH (Q06AN9), CD27B_ARATH (Q8LGU6), 
CDC16_ARATH (B3DNN5), CDC16_DICDI (Q1ZXE6), CDC16_HUMAN (Q13042), 
CDC16_MOUSE (Q8R349), CDC16_YEAST (P09798), CDC23_ARATH (Q9STS3), 
CDC23_BOVIN (A1A4R8), CDC23_DICDI (Q86B11), CDC23_HUMAN (Q9UJX2), 
CDC23_MOUSE (Q8BGZ4), CDC23_YEAST (P16522), CDC27_BOVIN (A7Z061), 
CDC27_HUMAN (P30260), CDC27_MOUSE (A2A6Q5), CDC27_RAT   (Q4V8A2), 
CDC27_YEAST (P38042), CEP70_HUMAN (Q8NHQ1), CEP70_MACFA (Q4R7V1), 
CEP70_MOUSE (Q6IQY5), CEP70_PONAB (Q5RDE3), CHIP_CHICK  (Q5ZHY5), 
CHIP_HUMAN  (Q9UNE7), CHIP_MOUSE  (Q9WUD1), CHR4_SCHPO  (O94614), 
CTR9_HUMAN  (Q6PD62), CTR9_MOUSE  (Q62018), CTR9_XENLA  (Q4QR29), 
CTR9_XENTR  (Q6DEU9), CTR9_YEAST  (P89105), CUT9_SCHPO  (P41889), 
CYA3_RHIME  (Q9Z3Q0), CYC8_DICDI  (O77033), CYC8_SCHPO  (O60184), 
CYC8_YEAST  (P14922), CYCH_PSEAE  (Q9I3M9), CYCH_PSEFL  (P52223), 
CYP40_ARATH (Q9C566), CYP7_YEAST  (P47103), DIA2_ASHGO  (Q75A03), 
DJB14_XENLA (Q7ZXQ8), DNJC3_BOVIN (Q27968), DNJC3_CHICK (Q5ZI13), 
DNJC3_DICDI (Q54M21), DNJC3_HUMAN (Q13217), DNJC3_MOUSE (Q91YW3), 
DNJC3_RAT   (Q9R0T3), DNJC7_DICDI (Q54IP0), DNJC7_HUMAN (Q99615), 
DNJC7_MOUSE (Q9QYI3), DNJC7_PONAB (Q5R8D8), DNJC7_SCHPO (Q9HGM9), 
DYXC1_GORGO (Q863A5), DYXC1_HUMAN (Q8WXU2), DYXC1_MOUSE (Q8R368), 
DYXC1_PANPA (Q863A6), DYXC1_PANTR (Q863A7), DYXC1_PONPY (Q863A4), 
DYXC1_RAT   (Q5VJS5), EMC2_YEAST  (P47133), EMW1_YEAST  (P42842), 
ERC6L_DANRE (A2BGR3), ETO1_ARATH  (O65020), ETOL2_ARATH (Q9LV01), 
F10A1_CHICK (Q5ZLF0), F10A1_DROME (C4NYP8), F10A1_HUMAN (P50502), 
F10A1_MOUSE (Q99L47), F10A1_PONAB (Q5RF31), F10A1_RAT   (P50503), 
F10A2_DROME (Q86DS1), F10A5_HUMAN (Q8NFI4), F10AL_ARATH (Q93YR3), 
FICD_CAEBR  (A8X181), FICD_CAEEL  (Q23544), FICD_DANRE  (Q6ZM51), 
FICD_DROMO  (B4KFW6), FICD_DROVI  (B4LQT7), FICD_DROWI  (B4MUQ2), 
FICD_HUMAN  (Q9BVA6), FICD_NEMVE  (A7SVT1), FICD_XENTR  (B4F6I5), 
FIS1_CANAL  (Q5AFF7), FKB42_ARATH (Q9LDC0), FKB59_DROME (Q9VL78), 
FKB70_ARATH (Q38931), FKB70_WHEAT (Q43207), FKBP4_BOVIN (Q9TRY0), 
FKBP4_HUMAN (Q02790), FKBP4_MOUSE (P30416), FKBP4_RABIT (P27124), 
FKBP4_RAT   (Q9QVC8), FKBP5_AOTNA (Q9XT11), FKBP5_CHLAE (Q95L05), 
FKBP5_HUMAN (Q13451), FKBP5_MOUSE (Q64378), FKBP5_PONAB (Q5RF88), 
FKBP5_RHIOR (P0C1J7), FKBP5_SAGOE (Q9XSI2), FKBP5_SAIBB (Q9XSH5), 
FKBP6_DICDI (Q54Y27), FKBP8_HUMAN (Q14318), FKBP8_MOUSE (O35465), 
FKBP8_RAT   (Q3B7U9), FKBPL_HUMAN (Q9UIM3), FKBPL_MOUSE (O35450), 
FKBPL_RAT   (Q6MG81), FLBA_CAUCR  (P21296), FRZF_MYXXA  (P31759), 
FTSY_AQUAE  (O67066), GLUP_BACSU  (P54493), GPSM1_HUMAN (Q86YR5), 
GPSM1_MOUSE (Q6IR34), GPSM1_RAT   (Q9R080), GPSM2_HUMAN (P81274), 
GPSM2_MOUSE (Q8VDU0), GUTR_BACSU  (P39143), HCPC_HELPJ  (Q9ZKB5), 
HCPC_HELPY  (O25728), HEMY_ECO57  (P0ACB9), HEMY_ECOL6  (P0ACB8), 
HEMY_ECOLI  (P0ACB7), HEMY_SHIFL  (P0ACC0), HGV2_HALRO  (Q02508), 
HIBN_XENLA  (P06180), HILA_SALPA  (Q5PEB1), HILA_SALTI  (P43016), 
HILA_SALTY  (P43015), HIR3_SCHPO  (P87315), IFIT1_HUMAN (P09914), 
IFIT1_MACFA (Q4R5F5), IFIT1_MOUSE (Q64282), IFIT2_CRIGR (Q60462), 
IFIT2_HUMAN (P09913), IFIT2_MOUSE (Q64112), IFIT3_HUMAN (O14879), 
IFIT3_PANTR (A5A6J9), IFIT5_HUMAN (Q13325), IFT1B_HUMAN (Q5T764), 
IFT88_HUMAN (Q13099), IFT88_MOUSE (Q61371), KDM6A_HUMAN (O15550), 
KDM6A_MOUSE (O70546), KLC1_HUMAN  (Q07866), KLC1_MOUSE  (O88447), 
KLC1_PONAB  (Q5R581), KLC1_RAT    (P37285), KLC2_HUMAN  (Q9H0B6), 
KLC2_MOUSE  (O88448), KLC3_BOVIN  (Q2TBQ9), KLC3_HUMAN  (Q6P597), 
KLC3_MOUSE  (Q91W40), KLC3_PONAB  (Q5R8E2), KLC3_RAT    (Q68G30), 
KLC4_BOVIN  (Q2HJJ0), KLC4_HUMAN  (Q9NSK0), KLC4_MOUSE  (Q9DBS5), 
KLC4_RAT    (Q5PQM2), KLC_CAEEL   (P46822), KLC_DROME   (P46824), 
KLC_LOLPE   (P46825), KLC_STRPU   (Q05090), LONF3_HUMAN (Q496Y0), 
LONF3_MACFA (Q8HXH0), LONF3_MOUSE (Q9D4H7), LR2BP_HUMAN (Q9P2M1), 
LR2BP_MACFA (Q4R3N2), LR2BP_MOUSE (Q9D4C6), LR2BP_RAT   (Q569C2), 
MBB1_CHLRE  (Q9FNS4), MTC1_COREQ  (P42828), MUG93_SCHPO (Q96WW2), 
NAA15_HUMAN (Q9BXJ9), NAA15_MOUSE (Q80UM3), NAA15_PONAB (Q5R4J9), 
NAA16_HUMAN (Q6N069), NAA16_MOUSE (Q9DBB4), NAC2_CHLRE  (Q9LEM8), 
NASP_BOVIN  (Q2T9P4), NASP_HUMAN  (P49321), NASP_MOUSE  (Q99MD9), 
NASP_RABIT  (P27123), NASP_RAT    (Q66HD3), NCF2_BOVIN  (O77775), 
NCF2_HUMAN  (P19878), NCF2_MOUSE  (O70145), NCFA_DICDI  (Q867T7), 
NFRA_ECOLI  (P31600), NLPI_ECO57  (P0AFB3), NLPI_ECO8N  (E4P9W4), 
NLPI_ECOBD  (C6EH62), NLPI_ECOBW  (C4ZSQ4), NLPI_ECODH  (B1XGX5), 
NLPI_ECOK1  (A1AG68), NLPI_ECOKI  (D5D1H3), NLPI_ECOL5  (Q0TCU6), 
NLPI_ECOL6  (P0AFB2), NLPI_ECOLI  (P0AFB1), NLPI_ECOLU  (B7NDE9), 
NLPI_HAEIN  (P44585), NLPI_SALCH  (Q57JI4), NLPI_SALTI  (Q8XG77), 
NLPI_SALTY  (Q7CPQ1), NLPI_SHIBS  (Q31W42), NLPI_SHIFL  (P0AFB4), 
NLPI_YERPA  (Q1C3L9), NLPI_YERPE  (Q7CKI5), NLPI_YERPN  (Q1CM50), 
NOXA1_MOUSE (Q8CJ00), NOXA1_RAT   (A7E3N7), NPHP3_DANRE (P0CI65), 
NPHP3_HUMAN (Q7Z494), NPHP3_MOUSE (Q7TNH6), NPHP3_XENLA (Q6AZT7), 
NPHP3_XENTR (A0JM23), NPRA_GEOSE  (P43130), NRFF_HAEIN  (P44942), 
NRFG_ECO57  (Q8X5S3), NRFG_ECOLI  (P32712), OCA3_SCHPO  (O60110), 
OE64C_ARATH (Q9LVH5), OE64M_ARATH (F4KCL7), OEP61_ARATH (B7ZWR6), 
OGT1_CAEEL  (O18158), OGT1_HUMAN  (O15294), OGT1_MOUSE  (Q8CGY8), 
OGT1_PIG    (Q27HV0), OGT1_RAT    (P56558), P4HA1_BOVIN (Q1RMU3), 
P4HA1_CHICK (P16924), P4HA1_HUMAN (P13674), P4HA1_MOUSE (Q60715), 
P4HA1_PONAB (Q5RAG8), P4HA1_RAT   (P54001), P4HA2_HUMAN (O15460), 
P4HA2_MOUSE (Q60716), PAS1_ARATH  (Q7DMA9), PEX5R_HUMAN (Q8IYB4), 
PEX5R_MOUSE (Q8C437), PEX5R_RAT   (Q925N3), PEX5_ARATH  (Q9FMA3), 
PEX5_ASHGO  (Q752X0), PEX5_BOVIN  (Q1RMV0), PEX5_CANAL  (O74711), 
PEX5_CANGA  (Q6FM42), PEX5_CAVPO  (O70525), PEX5_CHICK  (Q5ZMQ9), 
PEX5_CRIGR  (Q920N5), PEX5_DEBHA  (Q6BM14), PEX5_DICDI  (Q54MD1), 
PEX5_HUMAN  (P50542), PEX5_KLULA  (Q6CT48), PEX5_MOUSE  (O09012), 
PEX5_PICAN  (Q01495), PEX5_PICPA  (P33292), PEX5_RAT    (Q2M2R8), 
PEX5_SCHPO  (O94325), PEX5_YARLI  (Q99144), PEX5_YEAST  (P35056), 
PGAA_ECO57  (P69435), PGAA_ECOLI  (P69434), PKN1_MYXXA  (P33973), 
PPID_ASHGO  (Q75A33), PPID_ASPFU  (Q4WIF3), PPID_ASPOR  (Q2U0E0), 
PPID_BOVIN  (P26882), PPID_CANAL  (Q5ACI8), PPID_CANGA  (Q6FNU6), 
PPID_DEBHA  (Q6BXZ7), PPID_EMENI  (Q5B4E7), PPID_GIBZE  (Q4HXF6), 
PPID_HUMAN  (Q08752), PPID_KLULA  (Q6CL78), PPID_MOUSE  (Q9CR16), 
PPID_NEUCR  (Q9P3X9), PPID_RAT    (Q6DGG0), PPID_RHIOR  (P0C1I1), 
PPID_USTMA  (Q4P0V4), PPID_YARLI  (Q6CBP4), PPID_YEAST  (P53691), 
PPP5_ARATH  (Q84XU2), PPP5_HUMAN  (P53041), PPP5_MOUSE  (Q60676), 
PPP5_RAT    (P53042), PPP5_SOLLC  (Q84K11), PPT1_SCHPO  (O43049), 
PPT1_YEAST  (P53043), RAPA_BACSU  (Q00828), RAPB_BACSU  (P70962), 
RAPC_BACSU  (P94415), RAPE_BACSU  (P45943), RAPF_BACSU  (P71002), 
RAPG_BACSU  (O32294), RAPH_BACSU  (Q59HN8), RAPJ_BACSU  (O34327), 
RAPSN_CHICK (O42393), RAPSN_HUMAN (Q13702), RAPSN_MOUSE (P12672), 
RAPSN_TORCA (P09108), RBP2_HUMAN  (P49792), RBP2_MOUSE  (Q9ERU9), 
RGPD1_HUMAN (P0DJD0), RGPD2_HUMAN (P0DJD1), RGPD3_HUMAN (A6NKT7), 
RGPD4_HUMAN (Q7Z3J3), RGPD5_HUMAN (Q99666), RGPD8_HUMAN (O14715), 
RPAP3_CHICK (Q5ZKQ3), RPAP3_HUMAN (Q9H6T3), RPAP3_MOUSE (Q9D706), 
RPAP3_RAT   (Q68FQ7), RPAP3_XENLA (Q6NU95), RPAP3_XENTR (Q28IV3), 
RPN7_YEAST  (Q06103), SEC_ARATH   (Q9M8Y0), SFC4_SCHPO  (O74458), 
SGT1A_ARATH (Q9SUR9), SGT1B_ARATH (Q9SUT5), SGT1_ORYSJ  (Q0JL44), 
SGT2_SCHPO  (O13797), SGT2_YEAST  (Q12118), SGTA_BOVIN  (Q32LM2), 
SGTA_HUMAN  (O43765), SGTA_MOUSE  (Q8BJU0), SGTA_RAT    (O70593), 
SGTB_HUMAN  (Q96EQ0), SGTB_MOUSE  (Q8VD33), SGTB_RAT    (Q80W98), 
SGT_DICDI   (Q54VG4), SKI3_SCHPO  (O94474), SKI3_YEAST  (P17883), 
SNAA2_ARATH (Q9SPE6), SNAA_VITVI  (P93798), SOLR_CLOAB  (P33746), 
SPAG1_HUMAN (Q07617), SPAG1_MOUSE (Q80ZX8), SPAG1_RAT   (Q5U2X2), 
SPY_ARATH   (Q96301), SPY_EUSGR   (Q8LP10), SPY_HORVU   (O82422), 
SPY_ORYSJ   (Q6YZI0), SPY_PETHY   (O82039), SPY_SOLLC   (Q8RVB2), 
SRP72_CANFA (P33731), SRP72_DICDI (Q54EP7), SRP72_HUMAN (O76094), 
ST134_HUMAN (Q8IZP2), STI1L_PLAF7 (Q8ILC1), STI1L_PLAFA (P25407), 
STI1_SCHPO  (Q9USI5), STI1_YEAST  (P15705), STIP1_BOVIN (Q3ZBZ8), 
STIP1_CRIGR (O54981), STIP1_DICDI (Q54DA8), STIP1_HUMAN (P31948), 
STIP1_MACFA (Q4R8N7), STIP1_MOUSE (Q60864), STIP1_RAT   (O35814), 
STIP_SOYBN  (Q43468), SUGT1_BOVIN (Q2KIK0), SUGT1_DICDI (Q55ED0), 
SUGT1_HUMAN (Q9Y2Z0), SUGT1_MOUSE (Q9CX34), SUGT1_RAT   (B0BN85), 
TANC1_HUMAN (Q9C0D5), TANC1_MOUSE (Q0VGY8), TANC1_RAT   (Q6F6B3), 
TANC2_HUMAN (Q9HCD6), TANC2_MOUSE (A2A690), TC35A_XENLA (Q6INS3), 
TC35B_XENLA (Q8AVU9), TDX_ARATH   (Q8VWG7), TDX_ORYSJ   (Q6ES52), 
TF3C3_HUMAN (Q9Y5Q9), TFC4_YEAST  (P33339), TIF31_AJECN (A6R8I2), 
TIF31_ASPCL (A1CKI4), TIF31_ASPFC (B0XXS1), TIF31_ASPFU (Q4WXV2), 
TIF31_ASPNC (A2QDB9), TIF31_ASPOR (Q2UKX8), TIF31_ASPTN (Q0CNX5), 
TIF31_BOTFB (A6SFG0), TIF31_COCIM (Q1E101), TIF31_MAGO7 (A4R962), 
TIF31_NEOFI (A1D6Y7), TIF31_SCLS1 (A7ENU3), TMTC1_CAEEL (Q20144), 
TMTC1_DROME (Q9VQE9), TMTC1_HUMAN (Q8IUR5), TMTC1_MOUSE (Q3UV71), 
TMTC2_DROME (Q9V3X5), TMTC2_HUMAN (Q8N394), TMTC2_MOUSE (Q56A06), 
TMTC2_XENLA (Q6DCD5), TMTC3_DROME (Q7K4B6), TMTC3_HUMAN (Q6ZXV5), 
TMTC3_MOUSE (Q8BRH0), TMTC4_DROME (Q9VF81), TMTC4_HUMAN (Q5T4D3), 
TMTC4_MOUSE (Q8BG19), TOC64_PEA   (Q9MUK5), TOM34_HUMAN (Q15785), 
TOM34_MOUSE (Q9CYG7), TOM34_PONAB (A4K2V0), TOM34_RAT   (Q3KRD5), 
TOM70_HUMAN (O94826), TOM70_MOUSE (Q9CZW5), TOM70_NEUCR (P23231), 
TOM70_RAT   (Q75Q39), TOM70_SCHPO (O14217), TOM70_YEAS7 (A6ZRW3), 
TOM70_YEAST (P07213), TOM71_YEAST (P38825), TONSL_DANRE (A9JR78), 
TONSL_DROME (Q9VSA4), TOR_DROME   (Q9VK45), TPC12_HUMAN (Q8WVT3), 
TPC12_MOUSE (Q8K2L8), TPR1_SCHPO  (O42668), TT21A_HUMAN (Q8NDW8), 
TT21A_MOUSE (Q8C0S4), TT21B_HUMAN (Q7Z4L5), TT21B_MOUSE (Q0HA38), 
TT21B_XENLA (Q6INC1), TT30A_BOVIN (A2VE45), TT30A_DANRE (A7YE96), 
TT30A_XENLA (Q6INU8), TT30A_XENTR (A4IHR1), TTC12_HUMAN (Q9H892), 
TTC12_MACFA (Q95LY5), TTC12_MOUSE (Q8BW49), TTC13_HUMAN (Q8NBP0), 
TTC14_DROME (Q9VGU5), TTC14_HUMAN (Q96N46), TTC14_MOUSE (Q9CSP9), 
TTC16_HUMAN (Q8NEE8), TTC16_MACFA (Q95LZ5), TTC16_MOUSE (Q8C1F5), 
TTC17_HUMAN (Q96AE7), TTC18_HUMAN (Q5T0N1), TTC18_MACFA (Q95LN2), 
TTC1_BOVIN  (Q3ZBR5), TTC1_HUMAN  (Q99614), TTC1_MOUSE  (Q91Z38), 
TTC21_CAEBR (Q61LA1), TTC21_CAEEL (Q20255), TTC24_HUMAN (A2A3L6), 
TTC24_MOUSE (Q8BYG0), TTC25_DANRE (Q7ZU45), TTC25_HUMAN (Q96NG3), 
TTC25_MOUSE (Q9D4B2), TTC25_XENLA (Q32NU8), TTC27_BOVIN (Q17QZ7), 
TTC27_CHICK (Q5F3K0), TTC27_DICDI (Q54BW6), TTC27_HUMAN (Q6P3X3), 
TTC27_MOUSE (Q8CD92), TTC27_PONAB (Q5RBW9), TTC28_HUMAN (Q96AY4), 
TTC28_MOUSE (Q80XJ3), TTC29_MACFA (Q4R6M4), TTC29_MOUSE (Q80VM3), 
TTC29_RAT   (Q6AYP3), TTC29_XENLA (Q32NR4), TTC30_ANOGA (Q7PRA4), 
TTC30_DROME (Q9VK41), TTC30_DROPS (Q29L58), TTC31_HUMAN (Q49AM3), 
TTC32_HUMAN (Q5I0X7), TTC32_MOUSE (Q9DAC7), TTC33_DANRE (Q6DI40), 
TTC33_HUMAN (Q6PID6), TTC33_MOUSE (Q9D6K7), TTC33_XENLA (Q5M990), 
TTC34_HUMAN (A8MYJ7), TTC34_MOUSE (Q8C0Q3), TTC35_BOVIN (Q5E993), 
TTC35_DANRE (Q6TGY8), TTC35_HUMAN (Q15006), TTC35_MOUSE (Q9CRD2), 
TTC35_PONAB (Q5R882), TTC35_RAT   (B0BNG0), TTC35_XENTR (Q5M7J9), 
TTC36_BOVIN (Q3SZV0), TTC36_CAEEL (Q20683), TTC36_HUMAN (A6NLP5), 
TTC36_MOUSE (Q8VBW8), TTC36_NEMVE (A7RL75), TTC36_RAT   (Q66H45), 
TTC37_HUMAN (Q6PGP7), TTC37_XENLA (Q6DFB8), TTC3_HUMAN  (P53804), 
TTC3_MOUSE  (O88196), TTC5_BOVIN  (Q0P5H9), TTC5_HUMAN  (Q8N0Z6), 
TTC5_RAT    (Q5BK48), TTC6_HUMAN  (Q86TZ1), TTC7A_HUMAN (Q9ULT0), 
TTC7A_MOUSE (Q8BGB2), TTC7B_HUMAN (Q86TV6), TTC8_HUMAN  (Q8TAM2), 
TTC8_MOUSE  (Q8VD72), TTC9A_HUMAN (Q92623), TTC9A_MOUSE (Q3V038), 
TTC9B_HUMAN (Q8N6N2), TTC9B_MOUSE (Q9D6E4), TTC9C_BOVIN (A4IFF3), 
TTC9C_HUMAN (Q8N5M4), TTC9C_MACFA (Q9BGT1), TTC9C_MOUSE (Q810A3), 
TTC9C_RAT   (Q6P5P3), TTL1_ARATH  (Q9MAH1), UCP7_SCHPO  (O13773), 
UN45A_HUMAN (Q9H3U1), UN45A_MOUSE (Q99KD5), UN45A_PONAB (Q5RAP0), 
UN45A_RAT   (Q32PZ3), UN45B_HUMAN (Q8IWX7), UN45B_MOUSE (Q8CGY6), 
UN45B_XENLA (Q68F64), UN45B_XENTR (D7REX8), UTY_HUMAN   (O14607), 
UTY_MOUSE   (P79457), UTY_PANTR   (Q6B4Z3), Y015_PSEAE  (Q9I7B1), 
Y095_TREPA  (O83133), Y1088_AQUAE (O67178), Y1223_HAEIN (P44130), 
Y1345_METJA (Q58741), Y1428_METJA (Q58823), Y1494_XYLFA (Q9PD85), 
Y1515_ARATH (O23052), Y1720_PASMU (Q9CKA5), Y1984_CAUCR (Q9A6U9), 
Y2245_ARATH (Q8S8L9), Y263_METJA  (O06917), Y270_SYNE7  (P42460), 
Y298_BORBU  (Q57105), Y3534_RHIEC (Q2K4E6), Y425_NEIG1  (O87406), 
Y425_SYNP2  (P19737), Y4299_PSEAE (Q9HWA1), Y4667_PSEAE (P42810), 
Y4YS_RHISN  (P55727), Y5095_DICDI (Q54NS3), Y572_METJA  (Q57992), 
Y709_XYLFT  (Q87DH6), Y751_SYNY3  (Q04737), Y798_METJA  (Q58208), 
Y856_MIMIV  (Q5UQQ7), Y920_TREPA  (O83890), Y940_METJA  (Q58350), 
Y941_METJA  (Q57711), YCF37_CYAPA (P48277), YCF37_GUITH (O78458), 
YCF37_PORPU (P51191), YCF37_PORYE (Q1XDU6), YCF3_ACAM1  (B0CA92), 
YCF3_ACOAM  (A9LYA2), YCF3_ACOCL  (Q3V533), YCF3_ADICA  (Q85FL9), 
YCF3_AGRST  (A1EA09), YCF3_AMBTC  (Q70Y02), YCF3_ANAVT  (Q3M690), 
YCF3_ANGEV  (A2T334), YCF3_ANTFO  (Q85C36), YCF3_ARATH  (P61843), 
YCF3_ATRBE  (Q8S8X3), YCF3_BIGNA  (Q06J27), YCF3_BRAJU  (Q53CF3), 
YCF3_BUXMI  (A6MM37), YCF3_CALFG  (Q7YJX1), YCF3_CERDE  (A8SEA4), 
YCF3_CHAGL  (Q8M9W1), YCF3_CHAVU  (Q1ACM4), YCF3_CHLAT  (Q19V63), 
YCF3_CHLRE  (O20031), YCF3_CHLSC  (A6MMC3), YCF3_CHLVU  (P56311), 
YCF3_CITSI  (Q09MH7), YCF3_COFAR  (A0A336), YCF3_CUCSA  (Q4VZH4), 
YCF3_CUSEX  (A8W3C5), YCF3_CUSGR  (A7M902), YCF3_CUSOB  (A8W3I8), 
YCF3_CUSRE  (A7M967), YCF3_CYAA5  (B1X0Z5), YCF3_CYACA  (Q9TM42), 
YCF3_CYAME  (Q85FT1), YCF3_CYAP4  (B8HU23), YCF3_CYAP7  (B7KKZ8), 
YCF3_CYAP8  (B7K035), YCF3_CYAPA  (P48191), YCF3_CYCTA  (A6H5H4), 
YCF3_DAUCA  (Q0G9W1), YCF3_DIOEL  (A6MMK8), YCF3_DRIGR  (Q06GZ6), 
YCF3_EMIHU  (Q4G394), YCF3_EUCGG  (Q49KZ7), YCF3_GALSU  (Q08814), 
YCF3_GLOVI  (Q7NMQ0), YCF3_GNEPA  (A6BM62), YCF3_GOSBA  (A0ZZ36), 
YCF3_GOSHI  (Q2L906), YCF3_GRATL  (Q6B8S3), YCF3_GUITH  (O78490), 
YCF3_HELAN  (Q1KXV8), YCF3_HORVU  (A1E9J2), YCF3_HUPLU  (Q5SD07), 
YCF3_ILLOL  (A6MMU5), YCF3_IPOPU  (A7Y3D6), YCF3_JASNU  (Q06RC8), 
YCF3_LACSA  (Q1KXM2), YCF3_LEMMI  (A9L997), YCF3_LEPTE  (A6YG60), 
YCF3_LIRTU  (Q0G9L8), YCF3_LOLPR  (A8Y9H1), YCF3_LOTJA  (Q9BBT4), 
YCF3_MAIZE  (P27324), YCF3_MARPO  (P12202), YCF3_MESVI  (Q9MUT7), 
YCF3_MICAN  (B0JVY3), YCF3_MORIN  (Q09X16), YCF3_NANDO  (Q09FW0), 
YCF3_NEPOL  (Q9TL02), YCF3_NICSY  (Q3C1H7), YCF3_NICTO  (Q33C35), 
YCF3_NOSP7  (B2J1S7), YCF3_NOSS1  (Q8YS98), YCF3_NUPAD  (A1XFV6), 
YCF3_NYMAL  (Q6EW47), YCF3_ODOSI  (P49525), YCF3_OENEH  (Q9MTP0), 
YCF3_OLTVI  (Q20ET3), YCF3_ORYNI  (Q6ENH3), YCF3_ORYSA  (P0C516), 
YCF3_ORYSI  (P0C517), YCF3_ORYSJ  (P12203), YCF3_OSTTA  (Q0P3N1), 
YCF3_PANGI  (Q68S05), YCF3_PELHO  (Q06FW6), YCF3_PHAAO  (Q3BAN9), 
YCF3_PHATC  (A0T0D3), YCF3_PHAVU  (A4GG96), YCF3_PHYPA  (Q6YXP2), 
YCF3_PINKO  (A4QM74), YCF3_PINTH  (P52806), YCF3_PIPCE  (Q06GQ9), 
YCF3_PLALA  (Q5IBL2), YCF3_PLAOC  (Q09G45), YCF3_POPAL  (Q14FF6), 
YCF3_POPTR  (A4GYR1), YCF3_PORPU  (P51258), YCF3_PORYE  (Q1XDM9), 
YCF3_PROM0  (A3PAJ9), YCF3_PROM1  (A2BZV8), YCF3_PROM2  (A8G2D7), 
YCF3_PROM3  (A2CD21), YCF3_PROM4  (A9BCY9), YCF3_PROM5  (A2BUA8), 
YCF3_PROM9  (Q31D49), YCF3_PROMA  (Q7VE59), YCF3_PROMM  (Q7V4G0), 
YCF3_PROMP  (Q7V3E4), YCF3_PROMS  (A2BNS6), YCF3_PROMT  (Q46HP2), 
YCF3_PSEAK  (Q3ZJ63), YCF3_PSINU  (Q8WI17), YCF3_RANMC  (A1XGN9), 
YCF3_RHDSA  (A6MVX9), YCF3_SACHY  (P0C160), YCF3_SACOF  (Q6ENW2), 
YCF3_SCEOB  (Q1KVR8), YCF3_SINAL  (P61844), YCF3_SOLBU  (Q2MII6), 
YCF3_SOLLC  (Q2MI99), YCF3_SOLTU  (Q2VEH6), YCF3_SORBI  (A1E9S5), 
YCF3_SOYBN  (Q2PMU4), YCF3_SPIOL  (Q9M3M5), YCF3_STAPU  (Q32RY5), 
YCF3_STIHE  (Q06SJ8), YCF3_SYNE7  (Q31KR8), YCF3_SYNJA  (Q2JUT9), 
YCF3_SYNJB  (Q2JJK6), YCF3_SYNP2  (B1XNN2), YCF3_SYNP6  (Q5N149), 
YCF3_SYNPW  (A5GP07), YCF3_SYNPX  (Q7U435), YCF3_SYNR3  (A5GQJ6), 
YCF3_SYNS3  (Q0I6Y9), YCF3_SYNS9  (Q3B045), YCF3_SYNSC  (Q3AH18), 
YCF3_SYNY3  (P74063), YCF3_THAPS  (A0T0R5), YCF3_THEEB  (Q8DIQ6), 
YCF3_TOBAC  (P12204), YCF3_TRIEI  (Q10W18), YCF3_VITVI  (Q0ZJ19), 
YCF3_WHEAT  (P58257), YCF3_ZYGCR  (Q32RL4), YCIM_ECO57  (P0AB60), 
YCIM_ECOL6  (P0AB59), YCIM_ECOLI  (P0AB58), YDAB_MYCBO  (P46830), 
YGC1_SCHPO  (Q1MTN8), YGEH_ECOLI  (P76639), YIO2_SCHPO  (Q9P7N6), 
YKD1_CAEEL  (Q03560), YLM1_SCHPO  (O36033), YMP8_YEAST  (Q04364), 
YO91_CAEEL  (P41842), YOP2_SCHPO  (Q9Y7X2), YPIA_BACSU  (P54389), 
YPP1_SCHPO  (O94441), YRRB_BACSU  (O34452), YSOA_BACSU  (P94569), 
YVCD_BACSU  (O06968), Z3H7B_HUMAN (Q9UGR2)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AFSR_STRGR  (Q9S0Y6), AIPL1_BOVIN (Q95MP1), AIPL1_HUMAN (Q9NZN9), 
AIPL1_MACMU (Q95MP0), AIPL1_PANPA (Q95MN9), AIPL1_PAPCY (Q95MN8), 
AIPL1_SAIBB (Q95MN7), ALB32_ARATH (Q8L718), ALTH1_PLAF7 (C6KTB7), 
APC5_CHICK  (Q5ZKK3), APC5_DICDI  (Q54VV5), APC5_HUMAN  (Q9UJX4), 
APC5_MOUSE  (Q8BTZ4), APC5_PONAB  (Q5RE52), APC5_RAT    (A1L1K3), 
CHIP_ARATH  (Q9SRS9), CJ093_HUMAN (Q5SR76), CNS1_SCHPO  (O13754), 
CNS1_YEAST  (P33313), CYCH_RHIME  (P45400), DELE_HUMAN  (Q14154), 
DELE_MOUSE  (Q9DCV6), DELE_RAT    (P60924), DHKG_DICDI  (Q54Q69), 
DIA2_YEAST  (Q08496), DYH10_HUMAN (Q8IVF4), DYH17_HUMAN (Q9UFH2), 
DYH17_MOUSE (Q69Z23), DYH2_HUMAN  (Q9P225), DYH2_MOUSE  (P0C6F1), 
EDRF1_HUMAN (Q3B7T1), EDRF1_MOUSE (Q6GQV7), EDRF1_PONAB (Q5R9R1), 
ERC6L_BOVIN (A6QQR4), ERC6L_HUMAN (Q2NKX8), ERC6L_MOUSE (Q8BHK9), 
ETOL1_ARATH (Q9ZQX6), FANCG_HUMAN (O15287), FANCG_MOUSE (Q9EQR6), 
FB84_ARATH  (Q94C27), FBX9_HUMAN  (Q9UK97), FBX9_MOUSE  (Q8BK06), 
FBX9_RAT    (Q5U2X1), FEM1A_BOVIN (Q29RM5), FEM1A_DANRE (Q6P9Z4), 
FEM1A_DROME (Q9VFD5), FEM1A_HUMAN (Q9BSK4), FEM1A_RAT   (Q4V890), 
FEM1B_CHICK (Q5ZM55), FEM1B_HUMAN (Q9UK73), FEM1B_MOUSE (Q9Z2G0), 
FEM1B_RAT   (P0C6P7), FEM1B_XENLA (Q6GPE5), FEM1C_BOVIN (A7MB89), 
FEM1C_DANRE (Q7T3P8), FEM1C_HUMAN (Q96JP0), FEM1C_MOUSE (Q8CEF1), 
FEM1C_XENLA (Q2T9K6), FEM1_CAEEL  (P17221), FICD_AEDAE  (Q17A75), 
FICD_CULQU  (B0W429), FICD_DROAN  (B3MK83), FICD_DROER  (B3N5J3), 
FICD_DROGR  (B4JBN5), FICD_DROME  (Q8SWV6), FICD_DROPE  (B4GJC1), 
FICD_DROPS  (Q29JP8), FICD_DROSE  (B4I1V5), FICD_DROSI  (B4Q4M7), 
FICD_DROYA  (B4P0E1), FICD_MOUSE  (Q8BIX9), FICD_RAT    (Q6AY47), 
FIS1_ASHGO  (Q75AI5), FIS1_ASPFU  (Q4X0I8), FIS1_ASPOR  (Q2UF96), 
FIS1_BOVIN  (Q3T0I5), FIS1_CHAGB  (Q2H047), FIS1_DEBHA  (Q6BLG8), 
FIS1_EMENI  (Q5AZQ5), FIS1_GIBZE  (Q4IBU4), FIS1_HUMAN  (Q9Y3D6), 
FIS1_KLULA  (Q6CU37), FIS1_MOUSE  (Q9CQ92), FIS1_NEUCR  (Q7S8M1), 
FIS1_RAT    (P84817), FIS1_SCHPO  (Q9USZ8), FIS1_USTMA  (Q4P7J4), 
FIS1_YARLI  (Q6CFJ0), FKBP6_BOVIN (A6QQ71), FKBP6_HUMAN (O75344), 
FKBP6_MOUSE (Q91XW8), FLU_ARATH   (Q940U6), FM1AA_MOUSE (Q9Z2G1), 
FM1AB_MOUSE (Q8C0T1), GNN_HUMAN   (Q6P2S7), GNN_MOUSE   (Q692V3), 
GNN_RAT     (Q6P3V7), HCPA_HELPJ  (Q9ZMM1), HCPA_HELPY  (O25001), 
HCPB_HELPY  (O25103), HCPD_HELPJ  (Q9ZMS0), HCPD_HELPY  (O24968), 
HCPE_HELPJ  (Q9ZMJ9), HCPE_HELPY  (O25021), HIF1_YEAST  (Q12373), 
HIR3_ASPOR  (Q2UBW0), HIR3_KLULA  (Q6CWI4), HRD3_CANGA  (Q6FNV5), 
HRP_PLABE   (Q08168), HRT3_YEAST  (Q12347), IF140_HUMAN (Q96RY7), 
IF172_CHLRE (Q5DM57), IF172_DANRE (Q5RHH4), IF172_HUMAN (Q9UG01), 
IF172_MOUSE (Q6VH22), IF172_RAT   (Q9JKU3), IFIT3_MOUSE (Q64345), 
INT8_HUMAN  (Q75QN2), INT8_MOUSE  (Q80V86), INT8_XENLA  (Q4V847), 
K0664_AEDAE (Q17N71), K0664_ANOGA (Q7PZD5), K0664_BRUMA (A8PJX4), 
K0664_CAEBR (A8XAA9), K0664_CULQU (B0W2S0), K0664_DANRE (A0JMD0), 
K0664_DICDI (O15818), K0664_DROAN (B3MIW0), K0664_DROER (B3NPV8), 
K0664_DROGR (B4JW99), K0664_DROME (A1ZAB5), K0664_DROMO (B4KT50), 
K0664_DROPE (B4GAM1), K0664_DROPS (Q291J5), K0664_DROVI (B4LQ23), 
K0664_DROWI (B4MY63), K0664_DROYA (B4P6P7), K0664_HUMAN (O75153), 
K0664_MOUSE (Q5SW19), K0664_XENTR (Q0IHW8), LONF1_HUMAN (Q17RB8), 
LONF2_HUMAN (Q1L5Z9), LR2BP_DANRE (A5PLI4), LR2BP_XENLA (Q6IND7), 
MAK3_SCHPO  (O74539), MGR3L_YEAST (P36066), MGR3_YEAST  (Q04472), 
MSS2_YEAST  (P40990), NAA25_AEDAE (Q17DK2), NAA25_ANOGA (Q7PYI4), 
NAA25_CAEEL (Q21986), NAA25_DROME (Q9VDQ7), NAA25_DROPS (Q294E0), 
NAA25_HUMAN (Q14CX7), NAA25_MOUSE (Q8BWZ3), NAA25_RAT   (Q6QI44), 
NASP_DROME  (Q9I7K6), NAT1_SCHPO  (O74985), NAT1_YEAST  (P12945), 
NCF2_RAT    (A7E3N2), NOXA1_HUMAN (Q86UR1), OSM1_CAEEL  (Q22830), 
OSM1_DROME  (Q9W040), P3H1_CHICK  (Q6JHU8), P3H1_HUMAN  (Q32P28), 
P3H1_MOUSE  (Q3V1T4), P3H1_RAT    (Q9R1J8), P3H2_CHICK  (Q6JHU7), 
P3H2_HUMAN  (Q8IVL5), P3H2_MOUSE  (Q8CG71), P3H2_RAT    (Q4KLM6), 
P3H3_HUMAN  (Q8IVL6), P3H3_MOUSE  (Q8CG70), P4HA2_CHICK (Q5ZLK5), 
P4HA3_BOVIN (Q75UG4), P4HA3_HUMAN (Q7Z4N8), P4HA3_MOUSE (Q6W3F0), 
P4HA3_RAT   (Q6W3E9), PARP3_ARATH (Q9FK91), PEP3_SCHPO  (O74925), 
POF3_SCHPO  (O74991), PPID_AMAMU  (Q5U8Z7), PPID_CRYNB  (P0CP81), 
PPID_CRYNJ  (P0CP80), PPID_SCHPO  (Q11004), PRKDC_CANFA (Q8WN22), 
PRKDC_CHICK (Q8QGX4), PRKDC_HUMAN (P78527), PRKDC_MOUSE (P97313), 
PRKDC_XENLA (Q9DEI1), PTN23_HUMAN (Q9H3S7), PTN23_MOUSE (Q6PB44), 
PTN23_RAT   (O88902), RAPD_BACSU  (P94583), RAPI_BACSU  (P96649), 
RAPK_BACSU  (O34930), RMD1_BOVIN  (Q32KL4), RMD1_HUMAN  (Q96DB5), 
RMD1_MOUSE  (Q9DCV4), RMD1_PONAB  (Q5R8E4), RMD1_RAT    (Q4G069), 
S3TC1_HUMAN (Q8TE82), S3TC2_HUMAN (Q8TF17), S3TC2_MOUSE (Q80VA5), 
SCC4_AEDAE  (Q16NZ8), SCC4_CULQU  (B0WYS3), SCC4_DROAN  (B3M1B7), 
SCC4_DROER  (B3P0R4), SCC4_DROGR  (B4JHK2), SCC4_DROME  (Q9VFC0), 
SCC4_DROMO  (B4K4X6), SCC4_DROPE  (B4GF49), SCC4_DROPS  (Q296H8), 
SCC4_DROSE  (B4HE12), SCC4_DROSI  (B4QZ45), SCC4_DROVI  (B4M4L4), 
SCC4_DROWI  (B4NKT1), SCC4_DROYA  (B4PS83), SCC4_HUMAN  (Q9Y6X3), 
SCC4_MOUSE  (Q9D2X5), SCC4_NEMVE  (A7SUU7), SCC4_XENLA  (B4ZIX8), 
SCC4_XENTR  (B1H1Z8), SEC72_SCHPO (O14085), SIM3_SCHPO  (Q9USQ4), 
SMG7_HUMAN  (Q92540), SMG7_MOUSE  (Q5RJH6), SNAA_DICDI  (Q54NP6), 
SRP72_CAEEL (P91240), SWA2_YEAST  (Q06677), SYNE1_MOUSE (Q6ZWR6), 
T30A1_MOUSE (Q99J38), T30A2_MOUSE (A2AKQ8), T30A2_RAT   (Q4QQS2), 
TAH1_YEAST  (P25638), TIF31_ASHGO (Q75DR9), TIF31_CANAL (Q59MA9), 
TIF31_CANGA (Q6FJB0), TIF31_CRYNB (P0CR87), TIF31_CRYNJ (P0CR86), 
TIF31_DEBHA (B5RSP9), TIF31_KLULA (Q6CIN0), TIF31_LODEL (A5DWP3), 
TIF31_MALGO (A8QA64), TIF31_NEUCR (Q7RY84), TIF31_PHANO (Q0U0H7), 
TIF31_PICGU (A5DLU8), TIF31_PICST (A3GG12), TIF31_SCHPO (O59742), 
TIF31_USTMA (Q4PA50), TIF31_VANPO (A7TQT8), TIF31_YARLI (Q6CE38), 
TIF31_YEAST (Q03690), TITIN_DROME (Q9I7U4), TITIN_HUMAN (Q8WZ42), 
TITIN_MOUSE (A2ASS6), TO202_ARATH (P82873), TO203_ARATH (P82874), 
TO204_ARATH (P82805), TOM20_ORYSI (A2WYG9), TOM20_ORYSJ (Q5JJI4), 
TOM20_SOLTU (P92792), TONSL_BOVIN (Q0P5G1), TONSL_HUMAN (Q96HA7), 
TONSL_MOUSE (Q6NZL6), TONSL_RAT   (D4A615), TONS_ARATH  (Q6Q4D0), 
TOR_DICDI   (Q86C65), TRA1_SCHPO  (Q9HFE8), TRA1_YEAST  (P38811), 
TRNK1_HUMAN (O15050), TRNK1_MOUSE (Q8BV79), TT30A_HUMAN (Q86WT1), 
TT30B_BOVIN (A6H739), TT30B_HUMAN (Q8N4P2), TT30B_MOUSE (Q9CY00), 
TT30B_RAT   (B2RYD6), TT39A_DANRE (A1A5Y5), TT39A_HUMAN (Q5SRH9), 
TT39A_MOUSE (A2ACP1), TT39A_XENTR (Q28D40), TT39B_HUMAN (Q5VTQ0), 
TT39B_MACFA (Q95LT8), TT39B_MOUSE (Q8BYY4), TT39B_XENLA (Q5XHH9), 
TT39B_XENTR (Q28DB0), TT39C_DANRE (Q1LXE6), TT39C_HUMAN (Q8N584), 
TT39C_MOUSE (Q8VE09), TT39C_RAT   (Q0VGK2), TTC19_DANRE (A4QP73), 
TTC19_DROME (Q8SYD0), TTC19_HUMAN (Q6DKK2), TTC19_MOUSE (Q8CC21), 
TTC19_RAT   (D4A6D7), TTC22_HUMAN (Q5TAA0), TTC22_MOUSE (Q8C159), 
TTC23_BOVIN (Q2KHY7), TTC23_HUMAN (Q5W5X9), TTC23_MOUSE (Q8CHY7), 
TTC23_RAT   (Q4V7F0), TTC26_DANRE (Q5PR66), TTC26_HUMAN (A0AVF1), 
TTC26_MACFA (Q4R7Z9), TTC26_MOUSE (Q8BS45), TTC26_RAT   (Q5U2N8), 
TTC26_XENTR (A4III8), TTC29_HUMAN (Q8NA56), TTC30_AEDAE (Q16JL4), 
TTC30_CAEBR (A8XBR9), TTC30_CAEEL (Q8I7G4), TTC34_XENLA (Q5PPS5), 
TTC35_DICDI (Q86K48), TTC36_CAEBR (A8XHX1), TTC36_DANRE (A8E7I5), 
TTC36_DROME (Q9VU70), TTC36_DROPS (Q2M021), TTC36_XENTR (Q5EBF2), 
TTC38_DANRE (A3KPN8), TTC38_HUMAN (Q5R3I4), TTC38_MOUSE (A3KMP2), 
TTC38_PONAB (Q5RFF7), TTC38_XENLA (A2VD82), TTC38_XENTR (Q6DIV2), 
TTC4_BOVIN  (Q5EA11), TTC4_DICDI  (Q54M20), TTC4_HUMAN  (O95801), 
TTC4_MOUSE  (Q8R3H9), TTC5_MOUSE  (Q99LG4), TTC9C_XENTR (A4IHU6), 
UN45B_DANRE (Q6DGE9), VP13A_HUMAN (Q96RL7), VP13A_MOUSE (Q5H8C4), 
VP13D_DICDI (Q54LN2), VPS3_SCHPO  (O59796), WDR19_HUMAN (Q8NEZ3), 
WDR19_MOUSE (Q3UGF1), WDTC1_HUMAN (Q8N5D0), WDTC1_MOUSE (Q80ZK9), 
Y0313_NEIMB (Q9K165), Y123_TREPA  (O83160), Y1543_RHILO (Q98KC1), 
Y1756_XYLFT (Q87AR6), Y183_RICPR  (Q9ZDY1), Y1940_ATV   (Q3V4U6), 
Y2049_BACHD (Q9KB79), Y2164_VIBCH (Q9KQ40), Y282_TREPA  (O83306), 
Y3069_YERPE (Q8ZCC3), Y4059_DICDI (Q54Q80), Y7407_DICDI (Q54KD0), 
Y7728_DICDI (Q54JK1), Y8236_DICDI (Q54VF4), Y938_XYLFA  (Q9PEU0), 
YCF37_GRATL (Q6B950), YD161_YEAST (Q03771), YFGC_ECO57  (Q8XAD2), 
YFGC_ECOLI  (P66948), YFGC_SALTI  (P66951), YFGC_SALTY  (P66950), 
YFGC_SHIFL  (P66949), YOL8_CAEEL  (Q02335), YOMI_BACSU  (O31976), 
Z3H7A_HUMAN (Q8IWR0), ZC3H1_HUMAN (O60293), ZMY12_HUMAN (Q9H0C1)
False positive hits (sequences which do not belong to the set under consideration):
CLF1_ASHGO  (Q750X3), CLF1_ASPFU  (Q4WT84), CLF1_CRYNB  (P0CO11), 
CLF1_CRYNJ  (P0CO10), CLF1_CRYNV  (Q9HF03), CLF1_NEUCR  (Q7SGD2), 
CLF1_PARBR  (Q5K654), CLF1_USTMA  (Q4PB37), EXO1_DANRE  (Q803U7), 
EXO1_DICDI  (Q54ED2), SYF1_HUMAN  (Q9HCS7), SYF1_MOUSE  (Q9DCD2), 
SYF1_RAT    (Q99PK0), Y5729_DICDI (P0CD63)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1A17; 1E96; 1ELR; 1ELW; 1FCH; 1HH8; 1IHG; 1KT0; 1KT1; 1OUV; 1P5Q; 1QZ2; 1TJC; 1UZS; 1W3B; 1WAO; 1WM5; 1XNF; 2BUG; 2C0L; 2C0M; 2C2L; 2DBA; 2E2E; 2GW1; 2J9Q; 2Q7F; 2V5F; 2VYI; 2XPI; 2Y4T; 2Y4U; 3CEQ; 3EDT; 3ESK; 3FP2; 3FP3; 3FP4; 3FWV; 3HYM; 3IEG; 3LCA; 3NF1; 3PE3; 3PE4; 3Q15; 3Q47; 3Q49; 3Q4A; 3R9A; 3SF4; 3TAX;

View entry in original PROSITE format
View entry in raw text format (no links)


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