Entry: PS50016

Forthcoming changes to the profile format
General information about the entry

Entry name [info] ZF_PHD_2
Accession [info] PS50016
Entry type [info] MATRIX
Date [info] APR-2002 (CREATED); OCT-2013 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC50016
Associated ProRule [info] PRU00146

Name and characterization of the entry

Description [info] Zinc finger PHD-type profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=54;
/DISJOINT: DEFINITION=PROTECT; N1=4; N2=51;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.480; R2=0.0089; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=2477.69935; R2=14.20261; TEXT='HScore';
/CUT_OFF: LEVEL=0; SCORE=788; N_SCORE=8.5; H_SCORE=10488; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=564; N_SCORE=6.5; H_SCORE=10488; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=-100; E1=-100; MI=-105; MD=-105; IM=-105; DM=-105;
...
                A    B    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y    Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='N'; M=  -6,  -2, -11,  -4,  -7, -14,  -8,  -8, -17,  -6, -16, -11,   1, -19,  -6,  -4,   0,  -2, -12, -25,  -8,  -7;
/M: SY='N'; M=  -4,  -7, -24, -10,  -8, -14, -15,  -8,  -7,  -2,  -9,  -4,  -4, -14,  -6,  -4,  -6,  -4,  -6, -20,  -6,  -8;
/M: SY='F'; M= -10, -19, -20, -23, -16,  17, -21, -12,   2, -16,   3,   3, -16, -23, -16, -13, -11,  -4,   2,  -9,  12, -16;
/M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/I:         I=-6; MI=-32; MD=-32; IM=-32;
/M: SY='Y'; M=  -6,  -8, -11,  -8,  -5,  -2, -13,  -4,  -9,  -8,  -6,  -3,  -7, -10,  -6,  -7,  -5,  -5,  -9, -14,   2,  -6; D=-6;
/I:         DM=-32;
/M: SY='V'; M=  -6, -20, -21, -24, -17,   6, -27, -21,  12, -13,   7,   5, -17, -21, -17, -14, -12,  -4,  13, -18,   0, -18;
/M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/M: SY='G'; M=  -5,   2, -19,  -1,  -5, -17,   6,  -8, -24,  -6, -19, -14,   6, -18,  -6,  -5,   1,  -8, -19, -26, -16,  -5;
/M: SY='E'; M=  -6,   2, -24,   4,   8, -23,  -9,  -6, -23,   5, -19, -11,   2, -12,   6,   6,   3,  -1, -18, -27, -14,   6;
/I:         MD=-15;
/M: SY='S'; M=  -1,  -2, -12,  -4,   1, -19,  -8, -11, -16,  -5, -17, -11,   0,  -5,  -3,  -8,   7,   4, -11, -29, -17,  -2; D=-2;
/I:         MD=-15;
/M: SY='D'; M=  -7,   1, -22,   3,   0, -13,  -6,  -3, -13,  -6, -10,  -9,   0, -15,  -5,  -5,  -3,  -6, -12, -18,  -3,  -4; D=-2;
/I:         MD=-15;
/M: SY='D'; M=  -6,   5, -17,   6,   6, -18,  -8,  -5, -17,   2, -15, -11,   4,  -7,   2,   0,  -1,  -6, -15, -22, -13,   4; D=-2;
/I:         MD=-15;
/M:         M=  -3,  -1, -16,   0,  -2, -10,  -1,  -8, -12,  -4, -12,  -8,  -1,  -3,  -4,  -7,  -1,  -3, -10, -10,  -8,  -3; D=-2;
/I:         I=-2; MI=0; IM=0; DM=-15;
/M: SY='D'; M=  -8,   6, -25,  12,   7, -23,  -6,  -2, -25,  -5, -21, -17,   2,  -2,  -2,  -9,   4,  -1, -20, -30, -14,   2;
/M: SY='G'; M=  -2,   7, -25,   8,   4, -26,  12,  -7, -27,  -5, -22, -17,   8, -14,  -4,  -8,   2,  -9, -21, -28, -20,   0;
/M: SY='E'; M=  -6,  -1, -23,   1,   4, -18, -16, -11, -18,  -1, -15, -12,  -3,   0,  -2,  -5,  -4,  -6, -16, -24, -14,   1;
/M: SY='L'; M= -10, -25, -14, -30, -22,  10, -27, -18,  14, -21,  18,  17, -21, -25, -17, -17, -18,  -7,   9, -14,   1, -20;
/M: SY='I'; M=  -8, -27, -21, -30, -22,   3, -30, -19,  24, -22,  21,  19, -25, -25, -18, -19, -20,  -9,  20, -15,  -1, -21;
/M: SY='Q'; M=  -7,  -9, -14, -11,  -1,  -8, -19,  -7, -11,  -8,  -8,  -5,  -7, -18,   4,  -7,  -1,  -1, -11, -20,  -1,   1;
/M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/M: SY='D'; M=  -8,  22, -24,  28,  11, -32,  -4,  -2, -30,   0, -25, -20,  13, -12,   4,  -5,   1,  -8, -25, -32, -18,   7;
/I:         I=-8; MI=0; MD=-30; IM=0; DM=-30;
/M: SY='B'; M=  -7,   0, -21,   0,  -4, -16,  -4,  -8, -18,  -3, -13,  -9,  -1, -17,  -7,  -5,  -4,  -5, -13, -23,  -8,  -6;
/M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30,-120, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/I:         MD=-29;
/M: SY='D'; M=  -9,   6, -20,   9,   3, -24,  -2,  -6, -26,   1, -22, -15,   4, -10,   1,  -1,  -2,  -9, -22, -25, -14,   1; D=-6;
/I:         I=-8; MI=-29; MD=-29; IM=-29; DM=-29;
/M: SY='R'; M= -12,   2, -25,   3,   6, -21, -17,   1, -22,  11, -18, -11,   3, -15,   7,  21,  -2,  -4, -17, -25,  -9,   5; D=-6;
/I:         DM=-29;
/M: SY='W'; M=  -2, -17, -30, -18, -14, -11,  -5, -17, -18,  -9, -20, -14, -14, -11, -11, -13,  -8, -10, -17,  29,  -3, -11;
/M: SY='F'; M= -14, -25, -21, -29, -23,  30, -24,  -9,   2, -19,   3,   2, -20, -28, -21, -16, -17, -10,   2,   7,  25, -21;
/M: SY='H'; M= -20,   0, -30,   0,   0, -20, -20, 100, -30, -10, -20,   0,  10, -20,  10,   0, -10, -20, -30, -30,  20,   0;
/M: SY='Q'; M=  -6, -11, -24, -12,  -3, -17, -16, -10,  -7,  -4,  -8,  -1,  -8,  -7,   4,  -2,  -3,  -3,  -8, -24, -11,  -1;
/M:         M=  -7,  -2, -24,  -3,  -1, -11, -15,  -6, -13,   0, -13,  -8,  -1, -16,  -4,  -4,  -3,  -3, -10, -21,  -3,  -3;
/M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/M: SY='L'; M=  -3, -21, -16, -24, -16,   3, -25, -14,  10, -19,  15,   8, -20, -24, -16, -17, -13,  -3,  10, -18,   3, -17;
/M: SY='G'; M=  -5,  -3, -25,  -4,  -3, -23,   2, -10, -17,  -6, -15,  -7,   0, -11,   2,  -7,  -1,  -6, -16, -26, -16,  -1;
/M: SY='P'; M= -12, -11, -28, -10,  -7,  -6, -23,  -9,  -7,  -9,  -6,  -5, -10,   3, -11,  -9, -12,  -8,  -9, -19,  -7, -10;
/M: SY='P'; M=  -2,  -6, -25,  -6,  -1, -18, -10, -12, -17,  -5, -21, -14,  -3,   8,  -5,  -9,   3,   0, -16, -20, -14,  -4;
/M:         M=  -5,  -8, -25,  -7,  -2, -13, -14, -10, -11,  -3,  -8,  -5,  -8,  -7,  -4,  -6,  -8,  -8, -10, -21,  -7,  -4;
/M: SY='E'; M=  -8,  -4, -25,  -3,   4, -15, -20, -11, -11,   1, -10,  -8,  -3,  -7,  -3,   1,  -4,  -3,  -9, -26, -12,  -1;
/I:         I=-4; MI=0; MD=-15; IM=0;
/M: SY='S'; M=  -1,  -1, -11,   0,   1, -10,  -5,  -6,  -8,  -3,  -9,  -6,  -1,   1,  -2,  -5,   3,   1,  -7, -16,  -8,  -1; D=-1;
/I:         DM=-15;
/M:         M=  -2,  -5, -16,  -6,  -3, -10,  -7,  -9,  -6,  -4,  -5,  -4,  -4,  -6,  -2,  -5,  -4,  -4,  -7, -10,  -7,  -3; D=-1;
/I:         DM=-15;
/M: SY='A'; M=   1,  -4, -19,  -5,   0, -15, -10, -10, -10,  -3,  -7,  -5,  -5,  -8,  -3,  -5,  -3,  -4,  -8, -18, -11,  -2; D=-1;
/I:         DM=-15;
/M:         M=  -2,  -2, -22,  -2,  -2, -18, -13, -12,  -6,  -6, -11,  -7,  -2,   0,  -7, -11,  -3,  -5,  -6, -25, -15,  -6; D=-1;
/I:         DM=-15;
/M: SY='P'; M=  -6,  -9, -29,  -7,   1, -20, -12, -10, -17,  -1, -18, -11,  -7,   9,  -2,  -5,  -5,  -8, -18, -16, -13,  -2;
/M: SY='D'; M= -10,   5, -27,   9,   9, -22, -11,  -8, -23,   3, -20, -15,   3,  -1,   1,   0,   0,  -4, -21, -28, -16,   5;
/M: SY='G'; M=  -5,  -4, -24,  -3,   0, -17,   1, -10, -17,  -6, -15, -10,  -1, -16,  -5,  -5,   0,  -6, -12, -25, -14,  -3;
/M: SY='B'; M=  -6,  -2, -25,  -2,  -3, -21,  -4,  -8, -16,  -3, -15,  -8,  -2, -11,  -5,  -5,  -4,  -7, -12, -24, -14,  -4;
/M: SY='W'; M= -19, -33, -39, -35, -26,  25, -24, -20, -10, -19,  -8, -10, -30, -29, -21, -17, -31, -21, -18,  86,  32, -20;
/M: SY='L'; M=  -9, -18, -16, -21, -14,  -1, -25, -12,   2, -10,   3,   2, -14, -22,  -9,  -6,  -9,  -4,   2, -16,   3, -13;
/M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/M: SY='P'; M=  -8,  -8, -29,  -7,  -1, -22, -13, -12, -16,  -1, -19, -12,  -6,  13,  -4,  -3,  -4,  -4, -15, -24, -17,  -5;
/M: SY='R'; M=  -7,  -6, -21,  -8,  -2, -12, -11,  -5, -15,   1, -10,  -7,  -2, -19,  -4,   5,  -7,  -8, -12, -22,  -7,  -4;
/M: SY='C'; M= -10, -19, 115, -29, -29, -20, -30, -26, -30, -29, -20, -19, -19, -39, -29, -29, -10, -10, -11, -49, -28, -29;
/M: SY='K'; M=  -5,   0, -22,   0,   1, -19, -15,  -9, -14,   2, -11,  -5,  -1, -15,   2,   1,  -1,   1, -10, -27, -12,   1;
/M: SY='K'; M=  -8,  -3, -14,  -6,   0, -15, -18,  -9, -15,   1, -17, -10,   1,  -6,  -3,   0,  -2,  -4, -14, -27, -12,  -2;
/M: SY='K'; M=  -5,  -7,  -4,  -9,  -1, -19, -17,  -6, -20,   2, -18,  -9,  -6, -12,  -2,   2,  -2,  -5, -13, -29, -13,  -3;
/I:         E1=0; IE=-105; DE=-105;
» More

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 420 in 316 different sequences
Number of true positive hits 415 in 311 different sequences
Number of 'unknown' hits
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 124
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.81 %
Recall (true positives / (true positives + false negatives)) 76.99 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20_shuffled
Author [info] K_Hofmann
Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 6
Feature key [info] ZN_FING
Feature description [info] PHD-type
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
311 sequences

AF10_HUMAN  (P55197), AF10_MOUSE  (O54826), AF17_HUMAN  (P55198), 
AIRE_HUMAN  (O43918), AIRE_MOUSE  (Q9Z0E3), ALFIN_MEDSA (Q40359), 
ALFL1_ARATH (Q9FFF5), ALFL1_ORYSI (A2Y0Q2), ALFL1_ORYSJ (Q75IR6), 
ALFL2_ARATH (Q9SRM4), ALFL2_ORYSI (B8B8I3), ALFL2_ORYSJ (Q8H383), 
ALFL3_ARATH (Q9M2B4), ALFL3_ORYSI (B8AMA8), ALFL3_ORYSJ (Q84TV4), 
ALFL4_ARATH (O81488), ALFL4_ORYSI (A2XTW9), ALFL4_ORYSJ (Q7XUW3), 
ALFL5_ARATH (Q5XEM9), ALFL5_ORYSI (A2Y4R8), ALFL5_ORYSJ (Q60DW3), 
ALFL6_ARATH (Q8S8M9), ALFL6_ORYSI (A2WXR5), ALFL6_ORYSJ (Q7F2Z1), 
ALFL7_ARATH (Q8LA16), ALFL7_ORYSI (B8ADZ3), ALFL7_ORYSJ (Q6Z7F4), 
ALFL8_ORYSI (B8BJV8), ALFL8_ORYSJ (Q2R837), ALFL9_ORYSI (B8B8C5), 
ALFL9_ORYSJ (Q6YTY3), ATG35_PICPG (C4QVX6), ATX1_ARATH  (Q9C5X4), 
ATX2_ARATH  (P0CB22), ATX3_ARATH  (Q9M364), ATX4_ARATH  (Q9SUE7), 
ATX5_ARATH  (Q8GZ42), ATXR5_ARATH (Q8VZJ1), ATXR5_RICCO (B9RU15), 
ATXR6_ARATH (Q9FNE9), BAZ1A_HUMAN (Q9NRL2), BAZ1A_MOUSE (O88379), 
BAZ1A_XENLA (Q8UVR5), BAZ1B_DANRE (A2BIL7), BAZ1B_HUMAN (Q9UIG0), 
BAZ1B_MOUSE (Q9Z277), BAZ1B_XENLA (A8DZJ1), BAZ2A_HUMAN (Q9UIF9), 
BAZ2A_MOUSE (Q91YE5), BAZ2A_XENLA (B7ZS37), BAZ2B_CHICK (Q9DE13), 
BAZ2B_HUMAN (Q9UIF8), BPTF_HUMAN  (Q12830), BRD1_HUMAN  (O95696), 
BRPF1_HUMAN (P55201), BRPF3_HUMAN (Q9ULD4), BYE1_CANGA  (Q6FJ00), 
BYE1_DEBHA  (Q6BNY5), BYE1_PICGU  (A5DDB7), BYE1_SCHPO  (Q9Y7V2), 
BYE1_YEAS7  (A6ZZW1), BYE1_YEAST  (P36106), C3H19_ARATH (Q9SIV5), 
C3H44_ARATH (Q9SD34), CHD3_CAEEL  (Q22516), CHD3_DROME  (O16102), 
CHD3_HUMAN  (Q12873), CHD4_HUMAN  (Q14839), CHD4_MOUSE  (Q6PDQ2), 
CHD5_HUMAN  (Q8TDI0), CHD5_MOUSE  (A2A8L1), CHD5_RAT    (D3ZD32), 
CHDM_DROME  (O97159), CHR4_ARATH  (F4KBP5), CTI6_YEAST  (Q08923), 
CXXC1_BOVIN (Q5EA28), CXXC1_DROME (Q9W352), CXXC1_HUMAN (Q9P0U4), 
CXXC1_MOUSE (Q9CWW7), DIDO1_HUMAN (Q9BTC0), DIDO1_MOUSE (Q8C9B9), 
DPF1_CHICK  (P58267), DPF1_HUMAN  (Q92782), DPF1_MOUSE  (Q9QX66), 
DPF1_RAT    (P56163), DPF3_CHICK  (P58270), DPF3_DANRE  (A9LMC0), 
DPF3_HUMAN  (Q92784), DPF3_MOUSE  (P58269), ECM5_YEAST  (Q03214), 
FXL19_HUMAN (Q6PCT2), FXL19_MOUSE (Q6PB97), HAT31_ARATH (Q04996), 
HOX1A_MAIZE (P46605), ING1_ARATH  (Q9LIQ6), ING1_HUMAN  (Q9UK53), 
ING1_MOUSE  (Q9QXV3), ING1_SCHPO  (O42871), ING2_ARATH  (B3H615), 
ING2_HUMAN  (Q9H160), ING2_MOUSE  (Q9ESK4), ING2_SCHPO  (O74736), 
ING3_CHICK  (Q5ZK36), ING3_HUMAN  (Q9NXR8), ING3_MOUSE  (Q8VEK6), 
ING3_PONAB  (Q5RBA1), ING3_RAT    (Q498T3), ING3_XENLA  (Q7ZX31), 
ING3_XENTR  (Q66KD5), ING4_BOVIN  (Q3T095), ING4_CHICK  (Q5ZKY4), 
ING4_HUMAN  (Q9UNL4), ING4_MOUSE  (Q8C0D7), ING5_HUMAN  (Q8WYH8), 
ING5_MOUSE  (Q9D8Y8), INT12_BOVIN (Q32LL5), INT12_DANRE (Q6IQU7), 
INT12_HUMAN (Q96CB8), INT12_MACFA (Q8WNV2), INT12_MOUSE (Q9D168), 
INT12_PONAB (Q5RCV7), INT12_RAT   (Q68FR3), INT12_XENLA (Q6DJM6), 
INT12_XENTR (Q0V9U1), JADE1_BOVIN (Q5E9T7), JADE1_DANRE (Q803A0), 
JADE1_HUMAN (Q6IE81), JADE1_MOUSE (Q6ZPI0), JADE1_XENLA (Q6GQJ2), 
JADE2_HUMAN (Q9NQC1), JADE2_MOUSE (Q6ZQF7), JADE3_DANRE (Q7ZVP1), 
JADE3_HUMAN (Q92613), JADE3_MOUSE (Q6IE82), JADE3_XENTR (Q0P4S5), 
JHD1_ASPFU  (Q4WHB7), JHD1_CANAL  (Q5A847), JHD1_DEBHA  (Q6BXJ4), 
JHD1_EMENI  (Q5AW75), JHD1_YARLI  (Q6C423), JHD2_YEAST  (P47156), 
KAT6A_HUMAN (Q92794), KAT6A_MOUSE (Q8BZ21), KAT6A_RAT   (Q5TKR9), 
KAT6B_HUMAN (Q8WYB5), KAT6B_MACFA (Q8WML3), KAT6B_MOUSE (Q8BRB7), 
KD5BB_DANRE (Q6IQX0), KDM2A_HUMAN (Q9Y2K7), KDM2A_MOUSE (P59997), 
KDM2A_XENTR (Q5U263), KDM2B_HUMAN (Q8NHM5), KDM2B_MOUSE (Q6P1G2), 
KDM2B_XENLA (Q640I9), KDM5A_HUMAN (P29375), KDM5A_MOUSE (Q3UXZ9), 
KDM5B_CHICK (Q5F3R2), KDM5B_HUMAN (Q9UGL1), KDM5B_MOUSE (Q80Y84), 
KDM5C_CANFA (Q38JA7), KDM5C_HUMAN (P41229), KDM5C_MOUSE (P41230), 
KDM5C_PIG   (A1YVX4), KDM5D_CANFA (Q30DN6), KDM5D_HUMAN (Q9BY66), 
KDM5D_MOUSE (Q62240), KDM5D_PANTR (Q5XUN4), KDM5_CAEBR  (Q61T02), 
KDM5_CAEEL  (Q23541), KDM5_DROME  (Q9VMJ7), KDM7A_DANRE (Q5RHD1), 
KDM7A_HUMAN (Q6ZMT4), KDM7A_MOUSE (Q3UWM4), KDM7A_XENTR (Q08D35), 
KDM7B_DANRE (P0CF52), KMT2A_HUMAN (Q03164), KMT2A_MOUSE (P55200), 
KMT2B_HUMAN (Q9UMN6), KMT2B_MOUSE (O08550), KMT2C_HUMAN (Q8NEZ4), 
KMT2C_MOUSE (Q8BRH4), KMT2D_HUMAN (O14686), KMT2D_MOUSE (Q6PDK2), 
KMT2E_HUMAN (Q8IZD2), KMT2E_MOUSE (Q3UG20), LE418_CAEEL (G5EBZ4), 
LID2_SCHPO  (Q9HDV4), LIN49_CAEEL (Q20318), LIN59_CAEEL (O44757), 
MBD9_ARATH  (Q9SGH2), MES4_DROME  (Q8MT36), MIT1_SCHPO  (Q9P793), 
MLO2_SCHPO  (Q09329), MSC1_SCHPO  (Q9UT79), MTF2_HUMAN  (Q9Y483), 
MTF2_MOUSE  (Q02395), MTF2_PONAB  (Q5R7T9), NFXL1_ARATH (Q9SY59), 
NSD1_HUMAN  (Q96L73), NSD1_MOUSE  (O88491), NSD2_HUMAN  (O96028), 
NSD2_MOUSE  (Q8BVE8), NSD3_HUMAN  (Q9BZ95), NSD3_MOUSE  (Q6P2L6), 
NTO1_SCHPO  (O74759), NTO1_YEAST  (Q12311), NU301_CAEEL (Q6BER5), 
NU301_DROME (Q9W0T1), ORTH2_ARATH (Q8VYZ0), PCL_DROME   (Q24459), 
PF21A_HUMAN (Q96BD5), PF21A_MOUSE (Q6ZPK0), PF21B_HUMAN (Q96EK2), 
PF21B_MOUSE (Q8C966), PHF10_BOVIN (Q2T9V9), PHF10_DANRE (Q6NWE1), 
PHF10_HUMAN (Q8WUB8), PHF10_MOUSE (Q9D8M7), PHF10_RAT   (Q4V7A6), 
PHF10_XENLA (Q63ZP1), PHF12_HUMAN (Q96QT6), PHF12_MOUSE (Q5SPL2), 
PHF14_HUMAN (O94880), PHF14_MOUSE (Q9D4H9), PHF19_MOUSE (Q9CXG9), 
PHF1_HUMAN  (O43189), PHF1_MOUSE  (Q9Z1B8), PHF1_SCHPO  (P87233), 
PHF2_DANRE  (Q6P949), PHF2_DICLA  (E6ZGB4), PHF2_HUMAN  (O75151), 
PHF2_MOUSE  (Q9WTU0), PHF2_SCHPO  (Q09908), PHF3_HUMAN  (Q92576), 
PHF8_DANRE  (P0CH95), PHF8_HUMAN  (Q9UPP1), PHF8_MOUSE  (Q80TJ7), 
PHO23_YEAST (P50947), PHRF1_HUMAN (Q9P1Y6), PHRF1_MOUSE (A6H619), 
PHRF1_RAT   (Q63625), PKCB1_HUMAN (Q9ULU4), PKL_ARATH   (Q9S775), 
PRH_ARATH   (P48785), PRH_PETCR   (P48786), PYGO1_HUMAN (Q9Y3Y4), 
PYGO1_MOUSE (Q9D0P5), PYGO2_HUMAN (Q9BRQ0), PYGO_DROME  (Q9V9W8), 
RCO1_YEAST  (Q04779), REQUA_XENLA (Q9W638), REQUB_XENLA (Q9W636), 
REQU_CHICK  (P58268), REQU_HUMAN  (Q92785), REQU_MOUSE  (Q61103), 
RNO_DROME   (Q7YZH1), RNO_DROPS   (Q29EQ3), RSF1_HUMAN  (Q96T23), 
SAYP_DROME  (Q9VWF2), SET1_PLAF7  (C6KTD2), SET3_YEAST  (P36124), 
SET4_YEAST  (P42948), SNT2_YEAST  (P53127), SP110_HUMAN (Q9HB58), 
SP140_HUMAN (Q13342), SP14L_HUMAN (Q9H930), SPP1_SCHPO  (O74508), 
SPP1_YEAST  (Q03012), TAF3_CHICK  (Q5F489), TAF3_HUMAN  (Q5VWG9), 
TAF3_MOUSE  (Q5HZG4), TAF3_XENLA  (Q5EAW9), TIF1A_HUMAN (O15164), 
TIF1A_MOUSE (Q64127), TIF1B_HUMAN (Q13263), TIF1B_MOUSE (Q62318), 
TIF1B_RAT   (O08629), TRI33_DANRE (Q6E2N3), TRI33_HUMAN (Q9UPN9), 
TRI33_MOUSE (Q99PP7), TRI33_XENLA (Q56R14), TRI66_HUMAN (O15016), 
TRI66_MOUSE (Q924W6), TRX_DROME   (P20659), TRX_DROVI   (Q24742), 
UBR7_DICDI  (Q54DV0), UHRF1_BOVIN (A7E320), UHRF1_DANRE (E7EZF3), 
UHRF1_HUMAN (Q96T88), UHRF1_MOUSE (Q8VDF2), UHRF1_RAT   (Q7TPK1), 
UHRF1_XENLA (B6CHA3), UHRF1_XENTR (F6UA42), UHRF2_HUMAN (Q96PU4), 
UHRF2_MOUSE (Q7TMI3), Y3228_ARATH (Q5PNS0), Y8158_DICDI (Q55FD6), 
YA27_SCHPO  (Q09698), YAC5_SCHPO  (Q09819), YM2A_CAEEL  (P34447), 
YNG2_ASHGO  (Q757W2), YNG2_CANAL  (Q5AHB8), YNG2_CANGA  (Q6FSB1), 
YNG2_DEBHA  (Q6BNL6), YNG2_KLULA  (Q6CXN0), YNG2_YARLI  (Q6C5V7), 
YNG2_YEAST  (P38806), YP99_CAEEL  (Q09477), YQF7_SCHPO  (O94400), 
ZMY11_HUMAN (Q15326), ZMY11_MOUSE (Q8R5C8)
» More

UniProtKB/Swiss-Prot
False negative sequences
124 sequences

ARID4_ARATH (Q6NQ79), ASH1L_HUMAN (Q9NR48), ASH1L_MOUSE (Q99MY8), 
ASH1_DROME  (Q9VW15), ASH2L_HUMAN (Q9UBL3), ASH2L_MOUSE (Q91X20), 
ASH2_DROME  (Q94545), ASH2_SCHPO  (O60070), ASHR3_ARATH (Q949T8), 
ASXL1_HUMAN (Q8IXJ9), ASXL1_MOUSE (P59598), ASXL2_CHICK (Q5ZM88), 
ASXL2_HUMAN (Q76L83), ASXL2_MOUSE (Q8BZ32), ASXL3_HUMAN (Q9C0F0), 
ASXL3_MOUSE (Q8C4A5), ASX_DROME   (Q9V727), BYE1_YARLI  (Q6C0K9), 
CTI6_SCHPO  (Q1MTR4), G2E3_CHICK  (Q5F4A1), G2E3_HUMAN  (Q7L622), 
G2E3_MACFA  (Q4R9C4), G2E3_MOUSE  (Q5RJY2), HAC12_ARATH (Q9FWQ5), 
HAC1_ARATH  (Q9C5X9), HAC2_ARATH  (Q9FYH1), HAC4_ARATH  (Q9LG11), 
HAC5_ARATH  (Q9LE42), HACL1_ORYSJ (Q6YXY2), HACL2_ORYSJ (Q5Z8V7), 
HACL3_ORYSJ (Q9XHY7), HOP1_SCHPO  (Q9P7P2), JHD1_ASHGO  (Q75AL5), 
JHD1_CRYNB  (P0CO41), JHD1_CRYNJ  (P0CO40), JHD1_KLULA  (Q6CIC9), 
JHD1_USTMA  (Q4P5U1), JHD1_YEAST  (P40034), K1045_HUMAN (Q9UPV7), 
K1045_MOUSE (Q80TL4), K1045_PONAB (Q5R4R7), KDM4A_HUMAN (O75164), 
KDM4A_MOUSE (Q8BW72), KDM4A_PONAB (Q5RD88), KDM4B_HUMAN (O94953), 
KDM4B_MOUSE (Q91VY5), KDM4C_HUMAN (Q9H3R0), KDM4C_MOUSE (Q8VCD7), 
KDM7_CAEEL  (Q9GYI0), MES4_CAEEL  (Q9NH52), MMD1_ARATH  (Q7X6Y7), 
MS1_ARATH   (Q9FMS5), OBE1_ARATH  (Q9S736), OBE2_ARATH  (Q9LUB7), 
OBE3_ARATH  (Q94B71), OBE4_ARATH  (Q84TI3), ORTH1_ARATH (Q9FKA7), 
ORTH3_ARATH (Q9FVS2), ORTH4_ARATH (Q9C8E1), ORTH5_ARATH (Q680I0), 
P20L1_HUMAN (A8MW92), P20L1_MOUSE (Q8CCJ9), P20L1_RAT   (Q4V9H5), 
PF23A_DANRE (Q5BJ10), PF23A_XENLA (Q5HZN9), PF23B_DANRE (Q7SXB5), 
PF23B_XENLA (Q0IHB0), PH11A_MOUSE (Q8BVM9), PH11L_RAT   (Q5I0J8), 
PHF11_BOVIN (Q2HJ93), PHF11_HUMAN (Q9UIL8), PHF11_MOUSE (A6H5X4), 
PHF11_RAT   (Q5I0E2), PHF13_HUMAN (Q86YI8), PHF13_MOUSE (Q8K2W6), 
PHF19_HUMAN (Q5T6S3), PHF20_HUMAN (Q9BVI0), PHF20_MOUSE (Q8BLG0), 
PHF23_BOVIN (A5D962), PHF23_HUMAN (Q9BUL5), PHF23_MOUSE (Q8BSN5), 
PHF23_RAT   (Q6AY75), PHF23_XENTR (Q5U5E5), PHF6_BOVIN  (Q08DR0), 
PHF6_HUMAN  (Q8IWS0), PHF6_MOUSE  (Q9D4J7), PHF6_PONAB  (Q5R5Z2), 
PHF7_HUMAN  (Q9BWX1), PHF7_MOUSE  (Q9DAG9), PHF7_RAT    (Q6AXW4), 
PVIP_NICBE  (Q84N38), PVIP_PEA    (Q84N37), RAG2_CHICK  (P25022), 
RAG2_DANRE  (O13034), RAG2_HUMAN  (P55895), RAG2_MOUSE  (P21784), 
RAG2_ONCMY  (Q91193), RAG2_RABIT  (P34089), RAG2_XENLA  (Q91830), 
RAI1_HUMAN  (Q7Z5J4), RAI1_MOUSE  (Q61818), SET3_SCHPO  (Q10362), 
SETVS_PLAF7 (Q8IE95), SHPRH_HUMAN (Q149N8), SHPRH_MOUSE (Q7TPQ3), 
SIZ1_ARATH  (Q680Q4), SIZ1_ORYSJ  (Q6L4L4), SIZ2_ORYSJ  (Q6ASW7), 
SNT2_SCHPO  (Q10077), TCF19_HUMAN (Q9Y242), TCF19_MACMU (Q5TM48), 
TCF19_PANTR (Q7YR48), TCF19_PIG   (Q9TSV4), TCF20_HUMAN (Q9UGU0), 
TCF20_MOUSE (Q9EPQ8), UBR7_HUMAN  (Q8N806), UBR7_MOUSE  (Q8BU04), 
VIL1_ARATH  (Q9LHF5), VIL2_ARATH  (Q9SUM4), VIL3_ARATH  (Q5BPT4), 
VIN3_ARATH  (Q9FIE3), Y1342_ARATH (Q9C810), Y2181_ARATH (Q9ZUA9), 
YNG1_YEAST  (Q08465)
» More

UniProtKB/Swiss-Prot
False positive sequences
5 sequences

FAP1H_SCHPO (O74853), NFX1_BOVIN  (A6QLA0), NFX1_DICDI  (Q54BK0), 
NFX1_HUMAN  (Q12986), NFX1_MOUSE  (B1AY10)
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PDB
[Detailed view]
114 PDB

1F62; 1FP0; 1MM2; 1MM3; 1WE9; 1WEM; 1WEN; 1WEP; 1WES; 1WEU; 1WEV; 1X4I; 1XWH; 2DX8; 2E6R; 2E6S; 2F6J; 2F6N; 2FSA; 2FUI; 2FUU; 2G6Q; 2K16; 2K17; 2K1J; 2KE1; 2KFT; 2KGG; 2KGI; 2KU3; 2KWJ; 2KWK; 2KWN; 2KWO; 2KYU; 2L43; 2L5U; 2L75; 2LGG; 2LGK; 2LGL; 2LN0; 2LV9; 2M1R; 2M3H; 2MA5; 2MD7; 2MD8; 2MIQ; 2MNY; 2MNZ; 2PNX; 2PUY; 2QIC; 2RI7; 2RO1; 2VNF; 2VP7; 2VPB; 2VPD; 2VPE; 2VPG; 2XB1; 2YQL; 2YSM; 2YT5; 2YYR; 3ASK; 3ASL; 3C6W; 3GL6; 3KQI; 3KV4; 3KV5; 3KV6; 3LQH; 3LQI; 3LQJ; 3O33; 3O34; 3O35; 3O36; 3O37; 3QZV; 3SHB; 3SOU; 3SOW; 3SOX; 3T6R; 3U5M; 3U5N; 3U5O; 3U5P; 3V43; 3ZPV; 3ZVY; 3ZVZ; 4BBQ; 4COS; 4GND; 4GNE; 4GNF; 4GNG; 4GY5; 4L58; 4L7X; 4LJN; 4LK9; 4LKA; 4LLB; 4O64; 4Q6F; 4QF2; 4QF3
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