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| Entry: PS50053 |
| General information about the entry | |
|---|---|
| Entry name | UBIQUITIN_2 |
| Accession number | PS50053 |
| Entry type | MATRIX |
| Date | NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00271 |
| Associated ProRule | PRU00214 |
| Name and characterization of the entry | |
| Description | Ubiquitin domain profile. |
| Matrix / Profile | /GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=76;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=71;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=.1843; R2=.02177539; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=381; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=290; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=-30; E1=-30; MI=-105; MD=-105; IM=-105; DM=-105; MM=1; M0=-1;
A B C D E F G H I K L M N P Q R S T V W Y Z
/I: B1=0; BI=-105; BD=-105;
/M: SY='M'; M= -5,-24,-21,-28,-20, 0,-25,-18, 18,-18, 15, 22,-23,-23,-14,-17,-17, -6, 16,-11, -2,-17;
/M: SY='Q'; M= -8, 4,-23, 5, 6,-23,-16, 10,-21, 1,-21,-10, 4,-13, 11, 2, 6, 2,-18,-27, -5, 7;
/M: SY='I'; M= -7,-30,-21,-34,-27, 3,-34,-27, 34,-27, 27, 17,-26,-26,-23,-24,-20, -7, 29,-23, -3,-27;
/M: SY='T'; M= -9, -3,-18,-12,-10, 4,-20,-12, -8, -8, -3, -5, 3,-19,-10, -6, -1, 12, -7,-21, -3, -9;
/M: SY='V'; M= -5,-30,-15,-31,-26, 7,-31,-26, 26,-25, 25, 14,-29,-29,-26,-21,-18, -5, 32,-24, -4,-26;
/M: SY='K'; M=-11, -3,-28, -4, 4,-25,-19, 0,-25, 31,-24, -6, -1, -9, 7, 25, -7, -7,-18,-22, -8, 5;
/M: SY='T'; M= -1, -4,-16,-12,-12,-10,-18, -9, 0,-10, -6, 0, 1,-17, -9,-10, 4, 11, 3,-29,-10,-11;
/I: MD=-17;
/M: SY='L'; M= -9,-16,-24,-17, -8, -6,-23,-14, 2,-10, 7, 5,-13,-11, -6, -7,-12, -6, -2,-23, -7, -8;
/I: MD=-17;
/M: SY='Q'; M= -7, 7,-23, 6, 3,-26, -3, -3,-23, 4,-20,-10, 7,-13, 10, 5, 2, -2,-20,-25,-14, 6; D=-3;
/I: MD=-17;
/M: SY='G'; M= -1, 1,-26, 2, 3,-30, 14, -1,-28, -3,-23,-12, 2,-13, 9, -6, 1,-11,-24,-22,-17, 6; D=-3;
/I: I=-4; MI=0; MD=-17; IM=0; DM=-17;
/M: SY='Q'; M=-12, 7,-25, 8, 10,-22,-14, 7,-25, 9,-21,-11, 7,-13, 12, 12, -1, -5,-22,-25, -9, 10; D=-3;
/I: DM=-17;
/M: SY='T'; M= -3, -1,-19, -1, 2,-18,-13,-13,-12, -5,-13,-10, -2,-13, -3, -8, 9, 11, -6,-30,-14, -1;
/I: DM=-17;
/M: SY='I'; M= -6,-15,-21,-22,-18, 5,-23,-11, 7,-18, 1, 1, -7,-21,-15,-14, -6, -3, 5,-16, 0,-17;
/M: SY='E'; M= -6, -5,-21, -5, 10,-14,-21,-12,-11, -2,-11, -9, -5, -7, 2, -6, 3, 8, -8,-26,-11, 6;
/M: SY='I'; M= -8,-24,-20,-28,-22, 12,-29,-15, 17,-21, 13, 9,-21,-25,-19,-18,-15, -4, 17,-16, 7,-21;
/M: SY='E'; M=-10, 9,-24, 11, 15,-15,-17, -2,-21, -3,-17,-15, 5,-11, 3, -4, 4, 2,-18,-28,-10, 9;
/M: SY='V'; M= -5,-26,-19,-30,-25, 12,-20,-23, 15,-23, 13, 11,-22,-25,-24,-20,-14, -6, 18,-18, -1,-24;
/M: SY='E'; M= -5, 1,-25, 3, 9,-22, -9, -9,-26, 9,-23,-15, 1, -7, 4, 6, 3, -1,-19,-26,-15, 6;
/M: SY='P'; M= -5,-13,-26,-11, -4,-16,-15,-16, -5,-13, -6, -6,-11, 8,-10,-13, -6, -6, -7,-28,-17, -9;
/M: SY='S'; M= -1, 2,-21, 3, 10,-26,-10, -8,-23, 6,-24,-14, 3, -9, 10, 1, 13, 8,-17,-29,-15, 10;
/M: SY='E'; M= -8, 8,-27, 12, 13,-24,-14, -3,-21, 3,-18, -7, 2, -7, 8, -2, -2, -7,-20,-22,-14, 10;
/M: SY='T'; M= 0, -2,-13, -9, -8,-13,-18,-17,-10,-10,-12,-10, 0, -7, -7,-10, 17, 35, -2,-31,-12, -8;
/M: SY='V'; M= -2,-25,-14,-29,-27, -1,-30,-27, 28,-20, 9, 11,-24,-25,-24,-20, -8, 5, 38,-28, -8,-26;
/M: SY='Q'; M= 0, -6,-22, -6, 0,-15,-11, -5,-16, -3,-12, -8, -4,-10, 3, -6, 1, -4,-14,-23, -8, 1;
/M: SY='E'; M= -8, -1,-24, 1, 12,-20,-20, 4,-12, -5, -7, -5, -2,-14, 8, -6, -3, -6,-12,-28, -9, 9;
/M: SY='L'; M=-10,-25,-22,-28,-19, 7,-30,-20, 16,-19, 27, 13,-22,-25,-17,-12,-22, -7, 10,-19, 0,-19;
/M: SY='K'; M= -8, -2,-29, -3, 7,-28,-20,-11,-25, 42,-26, -9, -1,-11, 8, 27,-10,-10,-17,-20,-10, 7;
/M: SY='E'; M= -1, -1,-23, 0, 11,-22,-17, -6,-15, 2, -9, -7, -3,-13, 11, 0, -3, -5,-14,-25,-13, 10;
/M: SY='H'; M=-10, -9,-26,-11, -2,-19,-22, 13,-11, 8, -8, 6, -6,-17, 10, 6,-11,-11,-11,-22, -2, 3;
/I: MD=-25;
/M: SY='I'; M= -7,-22,-24,-26,-18, -4,-27,-23, 25,-22, 14, 10,-17,-22,-17,-21,-15, -8, 19,-24, -7,-20;
/I: MD=-25;
/M: SY='E'; M= 8, -1,-20, -3, 12,-22,-12, -3,-17, 0,-16,-11, 0, -9, 8, -1, 6, -1,-14,-25,-15, 9; D=-5;
/I: I=-6; MI=0; IM=0; DM=-25;
/M: SY='E'; M= -7, 6,-27, 11, 13,-29, -1, -3,-28, 4,-24,-15, 3,-11, 12, 1, 2, -8,-25,-25,-14, 12;
/I: DM=-25;
/M: SY='R'; M= -5, -7,-24, -7, 4,-19,-18,-10,-14, 8,-13, -8, -4,-10, 1, 13, -3, -5,-10,-25,-13, 1;
/M: SY='E'; M=-10, -2,-26, -2, 8,-18,-19, -7, -6, -4, -7, -2, -4,-13, 6, -7, -6, -5, -9,-23, -7, 6;
/M: SY='G'; M= 5, -4,-24, -7, -9,-26, 33,-15,-30, -9,-26,-17, 3,-16,-10,-10, 7, -7,-22,-24,-24,-10;
/M: SY='V'; M= -7,-23,-15,-27,-22, -1,-28,-22, 17,-15, 3, 9,-18,-19,-18,-14,-10, -4, 19,-24, -6,-21;
/M: SY='P'; M= -9, -9,-33, -2, 7,-27,-19, 1,-21, -5,-23,-14, -9, 40, 2, -9, -7,-10,-26,-29,-18, 1;
/M: SY='P'; M= 0,-13,-23,-12, -4,-17,-18,-15, -2,-10, -9, 0,-13, 9, -6,-14, -2, -2, -1,-28,-16, -6;
/M: SY='D'; M= -2, 13,-22, 15, 9,-21, 2, -7,-26, -6,-23,-20, 11,-12, -3,-10, 8, -4,-21,-30,-18, 3;
/M: SY='Q'; M= -9, 3,-26, 4, 9,-19,-10, -4,-23, 4,-20,-11, 3,-13, 13, 3, 1, -6,-21,-24,-11, 11;
/M: SY='Q'; M=-11, -9,-28,-11, 6,-21,-24, 0, -5, -2, -6, 5, -7,-15, 34, 0, -7,-10,-16,-18, -5, 20;
/M: SY='R'; M=-12,-11,-28,-12, -3,-19,-20, -9,-22, 25,-19, -9, -7,-18, 3, 38,-11,-10,-13, -8, -8, -2;
/M: SY='L'; M=-10,-30,-19,-31,-23, 19,-30,-21, 18,-29, 40, 16,-29,-30,-24,-20,-26, -9, 13,-17, 3,-23;
/M: SY='I'; M= -5,-24,-24,-30,-21, 0,-30,-19, 25,-23, 21, 15,-19,-22,-13,-21,-16, -6, 14,-18, 1,-19;
/I: MD=-20;
/M: SY='F'; M=-13,-22,-23,-26,-20, 34,-26, -2, -1,-16, 5, 1,-17,-27,-20,-13,-16, -8, -3, 5, 34,-20;
/I: I=-8; MI=-15; IM=-15; DM=-15; MD=-15;
/M: SY='E'; M= 4, 9,-23, 13, 14,-29, -6, -7,-26, 5,-23,-17, 4, -9, 8, -4, 7, -4,-20,-29,-18, 11;
/I: DM=-20;
/M: SY='G'; M= -1, -6,-29, -6,-17,-30, 62,-19,-39,-19,-29,-20, 1,-19,-19,-19, 1,-17,-29,-21,-29,-18;
/M: SY='K'; M= -7, -8,-27,-10, 0,-21,-21, -9,-14, 21,-15, -2, -5,-15, 7, 20, -8, -8,-10,-21, -9, 2;
/M: SY='V'; M= -7,-19,-24,-20,-10, -6,-25,-16, 2,-10, -1, 0,-16, -6, -8, -4,-10, -6, 3,-22, -8,-10;
/M: SY='L'; M=-10,-30,-21,-32,-22, 7,-31,-21, 25,-29, 42, 21,-28,-28,-20,-21,-27,-10, 15,-20, 0,-22;
/M: SY='E'; M= -8, 7,-27, 9, 19,-29,-16, 3,-25, 13,-21,-11, 5,-10, 18, 9, -1, -8,-23,-27,-13, 18;
/M: SY='D'; M=-11, 40,-27, 55, 18,-37, -9, -2,-36, -1,-28,-27, 16,-10, 0,-11, 3, -8,-26,-38,-20, 9;
/I: MD=-20;
/M: SY='D'; M= -9, 15,-25, 16, 8,-26, -1, 1,-27, 1,-24,-15, 15,-13, 3, -2, 5, -4,-23,-32,-17, 5;
/I: I=-8; MI=-15; IM=-15; DM=-15; MD=-15;
/M: SY='Q'; M= -5, -6,-23, -9, 2,-19,-20, -3,-10, 6, -7, 1, -5,-16, 11, 4, -6, -4,-10,-23, -8, 6;
/I: DM=-20;
/M: SY='T'; M= -1, -7,-11,-12, -9,-11,-19,-19,-12,-10,-13,-11, -5, 2,-11,-12, 11, 26, -6,-29,-13,-10;
/M: SY='L'; M= -7,-27,-21,-26,-18, 0,-27,-20, 15,-23, 26, 13,-26,-11,-18,-19,-20, -7, 11,-24, -7,-19;
/M: SY='S'; M= 4, -1,-21, -1, 3,-26, 5,-10,-25, 0,-23,-15, 2,-12, 3, -1, 10, 0,-18,-27,-19, 2;
/M: SY='D'; M= -6, 16,-26, 24, 24,-24,-14, -2,-27, 0,-21,-19, 5, -8, 7, -7, 3, -6,-23,-28,-13, 16;
/M: SY='Y'; M= -9,-21, 6,-24,-20, 7,-27, -5, -2,-19, 8, 0,-21,-30,-14,-17,-17, -9, -4, -7, 23,-19;
/M: SY='G'; M= -7, 8,-28, 6, -7,-28, 30, 0,-34, -6,-29,-18, 15,-18, -8, -7, 0,-14,-29,-27,-20, -8;
/M: SY='I'; M= -9,-28,-22,-34,-25, 7,-31,-21, 30,-25, 26, 25,-24,-25,-19,-21,-21, -8, 22,-20, 0,-23;
/M: SY='E'; M= -2, 5,-24, 6, 15,-27, -9, -6,-23, 5,-21,-13, 3,-10, 11, -1, 4, -1,-19,-27,-16, 13;
/M: SY='D'; M= -7, 16,-28, 25, 17,-31,-12, -7,-29, 1,-27,-22, 6, 12, 1, -8, 3, -6,-25,-34,-21, 8;
/M: SY='G'; M= -4, -2,-27, -2, 1,-25, 15,-10,-26, -4,-18,-12, 1,-16, 0, -4, -2,-11,-22,-24,-19, 0;
/M: SY='B'; M= -2, 12, -5, 9, -1,-23,-11, -4,-21, -8,-21,-15, 10,-15, -2,-10, 11, 8,-15,-35,-16, -2;
/M: SY='T'; M= -2, -8,-17,-13, -6, -7,-20,-15, -7, -6, -9, -6, -5,-14, -4, -5, 7, 16, -1,-25, -8, -5;
/M: SY='V'; M= -5,-28,-18,-32,-27, 1,-33,-28, 32,-24, 19, 14,-25,-26,-24,-23,-15, -2, 34,-25, -5,-27;
/M: SY='H'; M=-12, -8,-25, -8, 0, -8,-24, 18, -4,-11, -3, 4, -7,-18, -3,-10,-10, -9, -4,-23, 4, -4;
/M: SY='L'; M= -1,-24,-17,-27,-19, 4,-24,-19, 14,-19, 23, 15,-23,-25,-18,-16,-16, -4, 15,-21, -4,-18;
/M: SY='M'; M= -1,-15,-18,-20,-17, -7,-21, -1, 10,-13, 1, 13,-11,-22, -9,-13, -8, -6, 13,-24, -2,-14;
/M: SY='L'; M= -7,-18,-20,-18,-16, -7,-14,-18, 5,-14, 10, 7,-18,-25,-14,-10,-14, -8, 10,-24,-10,-16;
/M: SY='R'; M=-11, -1,-26, -1, 7,-22,-19, -1,-22, 16,-20,-10, 1,-13, 8, 23, 0, 0,-16,-25,-10, 5;
/M: SY='Q'; M= -9, -6,-26, -7, 6,-21,-16, -4,-12, 7, -5, 5, -6,-15, 14, 3,-10,-10,-15,-22, -9, 10;
/M: SY='R'; M= -9,-10,-15,-12, -7,-18,-20,-13,-16, 1,-14,-10, -5, 1, -5, 11, -4, 0,-13,-28,-15, -8;
/M: SY='G'; M= -2, -1,-26, -2, -9,-27, 33,-14,-33, -4,-29,-18, 5,-16, -9, -8, 6, -8,-24,-25,-23, -9;
/M: SY='G'; M= 3, -9,-28, -8, -8,-28, 39,-18,-32,-15,-28,-19, -3, -1,-13,-18, 2,-13,-26,-24,-28,-12;
/I: E1=0; IE=-105; DE=-105;
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| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:ALP11_SCHPO (Q10235), ANR60_HUMAN (Q9BZ19), BAG1A_SCHPO (O60125), BAG1_ARATH (Q0WUQ1), BAG1_CAEBR (Q61D31), BAG1_CAEEL (O44739), BAG1_HUMAN (Q99933), BAG1_MOUSE (Q60739), BAG1_RAT (B0K019), BAG2_ARATH (Q0WPX7), BAG3_ARATH (Q9LYP4), BAG4_ARATH (Q8RX71), BAG6A_XENLA (Q9YHD3), BAG6B_XENLA (Q6PA26), BAG6_DANRE (A3KPW9), BAG6_HUMAN (P46379), BAG6_MOUSE (Q9Z1R2), BAG6_ORNAN (A7X5R6), BAG6_PIG (A5D9M6), BAG6_RAT (Q6MG49), BAG6_XENTR (A4IH17), DDI1_ASPCL (A1CDT9), DDI1_ASPFU (Q4WGS4), DDI1_ASPOR (Q2USD7), DDI1_ASPTN (Q0CJ13), DDI1_BOVIN (Q2T9Z1), DDI1_CANGA (Q6FQE9), DDI1_CHAGB (Q2H085), DDI1_COCIM (Q1DNB9), DDI1_DEBHA (Q6BK42), DDI1_DICDI (Q54JB0), DDI1_EMENI (Q5AY89), DDI1_HUMAN (Q8WTU0), DDI1_MACFA (Q95JI3), DDI1_MOUSE (Q9DAF3), DDI1_NEOFI (A1DCU5), DDI1_NEUCR (Q7S906), DDI1_PHANO (Q0U3Y6), DDI1_RAT (A0JPP7), DDI1_YARLI (Q6CFI3), DDI2_DANRE (Q6TH22), DDI2_HUMAN (Q5TDH0), DDI2_MOUSE (A2ADY9), DDI2_XENLA (Q7ZYA7), DDI2_XENTR (Q497D6), DSK2_SCHPO (Q10169), DSK2_YEAST (P48510), ELOB_HUMAN (Q15370), ELOB_MOUSE (P62869), ELOB_RAT (P62870), HERP1_HUMAN (Q15011), HERP1_MOUSE (Q9JJK5), HERP1_PONAB (Q5R5B0), HERP2_BOVIN (Q0P5H8), HERP2_DANRE (Q6NYI0), HERP2_HUMAN (Q9BSE4), HERP2_MOUSE (Q9JJC9), HERP2_RAT (Q66HH4), HERP2_XENLA (Q7ZXQ3), HERP2_XENTR (Q28DF1), HOIL1_HUMAN (Q9BYM8), HOIL1_MOUSE (Q9WUB0), HOIL1_RAT (Q62921), HUB1_ASHGO (Q756X3), HUB1_CANGA (Q6FIX7), HUB1_KLULA (Q6CU12), HUB1_SCHPO (O94650), HUB1_YEAST (Q6Q546), IQUB_HUMAN (Q8NA54), IQUB_MACFA (Q4R6T7), ISG15_BOVIN (O02741), ISG15_HUMAN (P05161), ISG15_MOUSE (Q64339), MDY2_YEAST (Q12285), MIDNA_XENLA (Q7ZWN4), MIDNB_XENLA (Q7ZWX9), MIDN_DANRE (Q6NYU6), MIDN_HUMAN (Q504T8), MIDN_MOUSE (Q3TPJ7), MIDN_XENTR (Q5EB28), MUB1_ARATH (Q9MAB9), MUB1_ORYSJ (Q75GT2), MUB3_ARATH (Q9SW27), MUB3_ORYSJ (Q6Z8K4), MUB4_ARATH (Q9LSD8), MUB5_ARATH (Q9SH14), MUB6_ARATH (Q8GWJ6), NED81_DICDI (Q54TK0), NED82_DICDI (Q54L35), NEDD8_BOVIN (P61282), NEDD8_CAEEL (Q93725), NEDD8_DICDI (Q54XV3), NEDD8_DROME (Q9VJ33), NEDD8_HUMAN (Q15843), NEDD8_MOUSE (P29595), NEDD8_RABIT (Q4PLJ0), NEDD8_RAT (Q71UE8), NF2IP_HUMAN (Q8NCF5), NF2IP_MACFA (Q9GLZ9), NF2IP_MOUSE (O09130), NF2IP_RAT (Q6AYG7), NPL4_ORYSJ (Q9AS33), OASL1_MOUSE (Q8VI94), OASL1_RAT (G3V645), OASL2_RAT (Q5MYT9), OASL_HUMAN (Q15646), OTU1_DANRE (Q567B1), PMT3_SCHPO (O13351), PRKN2_HUMAN (O60260), PRKN2_MOUSE (Q9WVS6), PRKN2_RAT (Q9JK66), R27AA_ARATH (P59271), R27AA_ORYSJ (Q9ARZ9), R27AB_ARATH (P59232), R27AB_ORYSJ (P51431), R27AC_ARATH (P59233), RAD23_DICDI (Q54LV1), RAD23_ORYSJ (Q40742), RAD23_YEAST (P32628), RD23A_ARATH (Q84L33), RD23A_BOVIN (A3KMV2), RD23A_HUMAN (P54725), RD23A_MOUSE (P54726), RD23B_ARATH (Q84L32), RD23B_BOVIN (Q29RK4), RD23B_HUMAN (P54727), RD23B_MOUSE (P54728), RD23B_RAT (Q4KMA2), RD23C_ARATH (Q84L31), RD23D_ARATH (Q84L30), RHP23_SCHPO (O74803), RL401_CHLRE (P0CH11), RL401_SCHPO (P0CH06), RL401_YEAST (P0CH08), RL402_SCHPO (P0CH07), RL402_TRYCR (P0CH27), RL402_YEAST (P0CH09), RL403_CHLRE (P0CH10), RL40A_ARATH (B9DHA6), RL40A_ORYSJ (P0CH34), RL40B_ARATH (Q42202), RL40B_ORYSJ (P0CH35), RL40_ACACA (P49633), RL40_BOVIN (P63048), RL40_BRARA (P51423), RL40_CAEEL (P49632), RL40_CANFA (P63050), RL40_CRYNJ (P40909), RL40_DICDI (P14794), RL40_DROME (P18101), RL40_EIMBO (P46575), RL40_FELCA (P63052), RL40_HUMAN (P62987), RL40_LEIMA (P69201), RL40_LEITA (P69200), RL40_MACFA (P0C273), RL40_MOUSE (P62984), RL40_NEUCR (P0C224), RL40_NICSY (P49636), RL40_OPHHA (P68205), RL40_PIG (P63053), RL40_PONPY (P0C275), RL40_RAT (P62986), RL40_SHEEP (P0C276), RL40_TETPY (P33190), RL40_TETTS (P0DJ25), RL40_TRYBB (P21899), RL40_TRYCR (P14795), RS271_HORVU (P0CG86), RS272_HORVU (P0CG87), RS27A_ASPOF (P31753), RS27A_BOVIN (P62992), RS27A_CAEBR (P37164), RS27A_CAEEL (P37165), RS27A_CAVPO (P62978), RS27A_CHICK (P79781), RS27A_DAUCA (P59272), RS27A_DICDI (P14797), RS27A_DROME (P15357), RS27A_HUMAN (P62979), RS27A_ICTPU (P68200), RS27A_KLULA (P69061), RS27A_LUPAL (P47905), RS27A_MAIZE (P27923), RS27A_MANSE (P29504), RS27A_MOUSE (P62983), RS27A_NEUCR (P14799), RS27A_PLUXY (P68202), RS27A_RAT (P62982), RS27A_SCHPO (P0C016), RS27A_SOLLC (P62980), RS27A_SOLTU (P62981), RS27A_SPOFR (P68203), RS27A_YEAST (P05759), RS27B_SCHPO (P0C8R3), RUB1_ARATH (Q9SHE7), RUB1_DESAN (P0C073), RUB1_ORYSJ (P0C030), RUB1_YEAST (Q03919), RUB2_ARATH (Q8RUC6), RUB2_ORYSJ (P0C031), RUB3_ARATH (O65381), RUB3_ORYSJ (P0C032), SACS_HUMAN (Q9NZJ4), SF3A1_ARATH (Q8RXF1), SF3A1_BOVIN (A2VDN6), SF3A1_DICDI (Q86A14), SF3A1_HUMAN (Q15459), SF3A1_MOUSE (Q8K4Z5), SMO1A_XENLA (O57686), SMO1B_XENLA (Q5EAX4), SMO2A_XENLA (Q7ZTK7), SMO2B_XENLA (Q6GPW2), SMO3L_DANRE (Q6NV25), SMT3_YEAST (Q12306), SNR25_HUMAN (Q9BV90), SUMO1_ARATH (P55852), SUMO1_BOVIN (Q5E9D1), SUMO1_CERNI (Q9MZD5), SUMO1_CHICK (Q8QGH2), SUMO1_DANRE (Q7SZR5), SUMO1_HUMAN (P63165), SUMO1_MOUSE (P63166), SUMO1_ONCMY (Q9PT08), SUMO1_ORYSJ (P55857), SUMO1_PIG (A7WLH8), SUMO1_PONAB (Q5R6J4), SUMO1_RAT (Q5I0H3), SUMO1_SPETR (Q2EF74), SUMO1_XENTR (Q6DEP7), SUMO2_ARATH (Q9FLP6), SUMO2_BOVIN (P61955), SUMO2_CHICK (Q5ZJM9), SUMO2_CRIGR (Q6LDZ8), SUMO2_DANRE (Q6DHL4), SUMO2_HUMAN (P61956), SUMO2_MACFA (Q2PFW2), SUMO2_MOUSE (P61957), SUMO2_PIG (P61958), SUMO2_RAT (P61959), SUMO2_XENTR (Q28H04), SUMO3_ARATH (Q9FLP5), SUMO3_BOVIN (Q17QV3), SUMO3_CHICK (Q5ZHQ1), SUMO3_DANRE (Q6DI05), SUMO3_HUMAN (P55854), SUMO3_MOUSE (Q9Z172), SUMO3_RAT (Q5XIF4), SUMO3_XENLA (Q7SZ22), SUMO3_XENTR (Q6DK72), SUMO4_ARATH (Q9FKC5), SUMO4_HUMAN (Q6EEV6), SUMO4_PIG (A7WLI0), SUMO5_ARATH (Q8VZI7), SUMO6_ARATH (Q9FKC6), SUMO7_ARATH (Q3E8A8), SUMO8_ARATH (B3H5R8), SUMO_CAEEL (P55853), TAF1A_ARATH (Q8LRK9), TAF1B_ARATH (Q6PUA2), TAF1_ORYSJ (Q67W65), TBCEL_HUMAN (Q5QJ74), TBCEL_RAT (Q5PQJ7), TBP1_ORYSJ (Q9LL45), TECR_CAEEL (Q9N5Y2), TMUB1_BOVIN (Q3ZBI9), TMUB1_DANRE (Q6P135), TMUB1_HUMAN (Q9BVT8), TMUB1_MOUSE (Q9JMG3), TMUB1_RAT (Q53AQ4), TMUB1_XENLA (Q3KPV4), TMUB1_XENTR (Q4V9Y1), TMUB2_BOVIN (Q2HJA8), TMUB2_HUMAN (Q71RG4), TMUB2_MOUSE (Q3V209), TMUB2_RAT (Q4FZV7), TRP1_ARATH (Q8L7L8), TRP2_ARATH (Q9SNB9), TRP4_ARATH (Q9FFY9), UB4AA_ONCMY (C1BGZ8), UB4AA_SALSA (B5XFI8), UB4AB_ONCMY (C1BHN7), UB4AB_SALSA (B5X9S9), UBAC1_CHICK (Q5ZJI9), UBAC1_XENTR (Q28DG7), UBB_BOVIN (P0CG53), UBB_CAVPO (P0CG54), UBB_CHICK (P0CG62), UBB_GORGO (P0CG67), UBB_HORSE (Q8MKD1), UBB_HUMAN (P0CG47), UBB_MOUSE (P0CG49), UBB_PANTR (P0CG65), UBB_PONPY (P0CG60), UBB_RAT (P0CG51), UBB_SHEEP (P0CG55), UBCP1_BOVIN (Q2KJD7), UBCP1_CHICK (Q5ZJJ8), UBCP1_DANRE (Q6DI37), UBCP1_HUMAN (Q8WVY7), UBCP1_MOUSE (Q8BGR9), UBCP1_PONAB (Q5R4C4), UBCP1_RAT (Q5FWT7), UBCP1_XENLA (Q641F1), UBCP1_XENTR (Q28EX9), UBCP_ARATH (Q8W3M6), UBC_BOVIN (P0CH28), UBC_GORGO (P0CG66), UBC_HUMAN (P0CG48), UBC_MOUSE (P0CG50), UBC_PANTR (P0CG64), UBC_PIG (P0CG68), UBC_PONPY (P0CG61), UBC_RAT (Q63429), UBD_HUMAN (O15205), UBD_MOUSE (P63072), UBD_RAT (Q921A3), UBFD1_HUMAN (O14562), UBFD1_MOUSE (Q78JW9), UBI1P_CANAX (P0CG73), UBI1P_NICSY (P0CG85), UBI1P_PETCR (P0CH04), UBI2P_PETCR (P0CH05), UBI4P_CANAX (P0CG74), UBI4P_KLULA (P0CG75), UBI4P_NEUCR (P0CG70), UBI4P_NICSY (P0CG84), UBI4P_SCHPO (P0CG72), UBI4P_YEAST (P0CG63), UBIL_NPVAC (P16709), UBIL_NPVOP (Q05120), UBIML_HUMAN (A6NDN8), UBIM_BOVIN (P62865), UBIM_CRIGR (Q60435), UBIM_HUMAN (P35544), UBIM_MOUSE (P35545), UBIM_MUSSI (P62868), UBIM_PIG (P55812), UBIM_PONAB (P0C2F1), UBIM_RAT (Q05474), UBIQ1_CAEEL (P0CG71), UBIQA_DICDI (P0CG76), UBIQD_DICDI (P0CG77), UBIQF_DICDI (P0CG78), UBIQG_DICDI (P0CG79), UBIQH_DICDI (P0CG81), UBIQI_DICDI (P0CG80), UBIQJ_DICDI (P0CG88), UBIQP_ACECL (P42739), UBIQP_AGLNE (P42740), UBIQP_AVEFA (P69309), UBIQP_CRIGR (P62976), UBIQP_DROME (P0CG69), UBIQP_EUPEU (P23324), UBIQP_GEOCY (P59669), UBIQP_HORVU (P0CG83), UBIQP_LINUS (P69315), UBIQP_PEA (P69322), UBIQP_PHYIN (P22589), UBIQP_SOYBN (P69325), UBIQP_STRPU (P23398), UBIQP_TETPY (P0CG82), UBIQP_XENLA (P62972), UBIQ_AVESA (P69310), UBIQ_CAMDR (Q865C5), UBIQ_CERCA (P68197), UBIQ_COPCO (P19848), UBIQ_ENCCU (Q8SWD4), UBIQ_HELAN (P69313), UBIQ_LUMTE (P84589), UBIQ_LUPPO (P69317), UBIQ_RABIT (P62975), UBIQ_WHEAT (P69326), UBL1_SCHPO (O14399), UBL3_BOVIN (Q2TA46), UBL3_HUMAN (O95164), UBL3_MOUSE (Q9Z2M6), UBL3_RAT (Q5BJT2), UBL4A_ANOFI (C3KHF2), UBL4A_CALJA (B0KWT6), UBL4A_CALMO (B1MTV8), UBL4A_DANRE (Q7ZWB2), UBL4A_ESOLU (C1BXU5), UBL4A_HUMAN (P11441), UBL4A_MOUSE (P21126), UBL4A_PONAB (Q5R4T1), UBL4A_RABIT (B7NZQ9), UBL4A_RAT (B2GV38), UBL4A_RHIFE (B2KIK3), UBL4A_XENLA (Q0D261), UBL4A_XENTR (A4QND0), UBL4B_BOVIN (Q2T9Q2), UBL4B_HUMAN (Q8N7F7), UBL4B_MONDO (Q19KS6), UBL4B_MOUSE (Q9CQ84), UBL5_ARATH (Q9FGZ9), UBL5_CAEEL (P91302), UBL5_DROME (Q9V998), UBL7_BOVIN (Q2KIS3), UBL7_HUMAN (Q96S82), UBL7_MOUSE (Q91W67), UBP14_BOVIN (Q0IIF7), UBP14_HUMAN (P54578), UBP14_MOUSE (Q9JMA1), UBP14_PANTR (P60051), UBP14_RABIT (P40826), UBP26_ARATH (Q9SCJ9), UBP26_ORYSI (A2XDG4), UBP26_ORYSJ (A3AF13), UBP48_CHICK (Q5ZM45), UBP48_HUMAN (Q86UV5), UBP48_MOUSE (Q3V0C5), UBP48_RAT (Q76LT8), UBP6_ARATH (Q949Y0), UBP6_SCHPO (Q92353), UBP7_ARATH (Q84WC6), UBQ10_ARATH (Q8H159), UBQ11_ARATH (P0CH33), UBQ12_ARATH (Q3E7K8), UBQ14_ARATH (Q3E7T8), UBQ3_ARATH (Q1EC66), UBQ3_ORYSJ (Q58G87), UBQ4_ARATH (P0CH32), UBQ8_ARATH (Q39256), UBQ9_ARATH (Q9FHQ6), UBQL1_HUMAN (Q9UMX0), UBQL1_MOUSE (Q8R317), UBQL1_PONAB (Q5R684), UBQL1_RAT (Q9JJP9), UBQL2_HUMAN (Q9UHD9), UBQL2_MOUSE (Q9QZM0), UBQL3_HUMAN (Q9H347), UBQL3_MOUSE (Q8C5U9), UBQL4_HUMAN (Q9NRR5), UBQL4_MOUSE (Q99NB8), UBQLN_HUMAN (Q8IYU4), UBQLN_MOUSE (Q14DL0), UBQLN_RAT (Q5XIP4), UBQL_DICDI (Q9NIF3), UBTD1_BOVIN (Q3ZBQ1), UBTD1_DANRE (Q4V8W7), UBTD1_HUMAN (Q9HAC8), UBTD1_MOUSE (Q91WB7), UBTD1_RAT (Q68FV8), UBTD1_XENLA (Q640W6), UBTD2_BOVIN (Q5EAE3), UBTD2_DANRE (Q6DG43), UBTD2_HUMAN (Q8WUN7), UBTD2_MOUSE (Q6PGH0), UHRF1_BOVIN (A7E320), UHRF1_DANRE (E7EZF3), UHRF1_HUMAN (Q96T88), UHRF1_MOUSE (Q8VDF2), UHRF1_RAT (Q7TPK1), UHRF1_XENLA (B6CHA3), UHRF1_XENTR (F6UA42), UHRF2_HUMAN (Q96PU4), UHRF2_MOUSE (Q7TMI3), UPL5_ARATH (Q9SU29), USA1_YEAST (Q03714), Y2010_ARATH (P0C895), YB92_SCHPO (O42967), YHLC_SCHPO (Q9HGL0), YKA4_CAEEL (P34256), YO25_CAEEL (P34675), YQ77_SCHPO (O94580), ZFAN4_HUMAN (Q86XD8), ZFAN4_MOUSE (D3Z3C6)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): DDI1_ASHGO (Q754R2), DDI1_CRYNB (P0CS15), DDI1_CRYNJ (P0CS14), DDI1_KLULA (Q6CNS3), DDI1_YEAST (P40087), HOIL1_DANRE (A9JTG5), HOIL1_DICLA (E6ZIJ1), HUB1_DEBHA (Q6BUP7), IQUB_MOUSE (Q8CDK3), IQUB_RAT (Q45GW3), MUB2_ARATH (Q8LCS8), MUB2_ORYSJ (Q67UI2), MUB4_ORYSJ (Q7XRU4), NF2IP_XENTR (Q0P4K8), OASL2_MOUSE (Q9Z2F2), OTU1_CHICK (Q5F3A6), OTU1_DROME (Q9VRJ9), OTU1_DROPS (Q29FC9), OTU1_XENLA (Q0IH43), RL40_CHICK (P62985), SACS_MOUSE (Q9JLC8), SHRPN_BOVIN (E1BDF2), SHRPN_HUMAN (Q9H0F6), SHRPN_MOUSE (Q91WA6), SHRPN_RAT (Q9EQL9), SNR25_BOVIN (Q3ZBQ4), SNR25_MOUSE (Q8VIK1), TBCEL_MOUSE (Q8C5W3), TBK1_HUMAN (Q9UHD2), TBK1_MOUSE (Q9WUN2), TRP3_ARATH (Q9C7B1), TRP5_ARATH (Q6R0E3), TRP6_ARATH (Q9M347), UBAC1_HUMAN (Q9BSL1), UBAC1_MOUSE (Q8VDI7), UBAC1_RAT (Q5XIR9), UBL5_BOVIN (Q3T0Z3), UBL5_DANRE (Q7SXF2), UBL5_DICDI (Q54Q03), UBL5_HUMAN (Q9BZL1), UBL5_MESAU (Q6EGX7), UBL5_MOUSE (Q9EPV8), UBL5_PSAOB (Q791B0), UBP4_BOVIN (A6QR55), UBP4_HUMAN (Q13107), UBP4_MOUSE (P35123), UBP4_PONAB (Q5RCD3), UBP4_RAT (B2GUZ1), UBP6_YEAST (P43593), UBTD1_XENTR (Q6GL38)Sequences which could potentially belong to the set under consideration: ESC2_ASHGO (Q756K3), ESC2_YEAST (Q06340)False positive hits (sequences which do not belong to the set under consideration): ANKUB_HUMAN (A6NFN9), CYSI_BACA2 (A7Z8R5), IKKB_HUMAN (O14920), RAD60_SCHPO (Q9USX3), TBCE_BOVIN (Q32KS0), YN67_SCHPO (O94511)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] |
1A5R; 1AAR; 1BT0; 1C3T; 1CMX; 1D3Z; 1EUV; 1F9J; 1FXT; 1G6J; 1GJZ; 1IYF; 1J8C; 1L2N; 1LM8; 1LQB; 1M94; 1MG8; 1NBF; 1NDD; 1OGW; 1OQY; 1OTR; 1P1A; 1P3Q; 1P98; 1P9D; 1Q0W; 1Q5W; 1QZE; 1R4M; 1R4N; 1S1Q; 1SE9; 1SIF; 1TBE; 1TGZ; 1TTN; 1U4A; 1UBI; 1UBQ; 1UD7; 1UEL; 1UZX; 1V5O; 1V5T; 1V80; 1V81; 1V86; 1VCB; 1WE6; 1WE7; 1WGD; 1WGG; 1WGH; 1WH3; 1WIA; 1WM2; 1WM3; 1WR1; 1WR6; 1WRD; 1WX7; 1WX9; 1WXV; 1WY8; 1WYW; 1WZ0; 1X1M; 1XD3; 1XQQ; 1XT9; 1Y8R; 1YD8; 1YQB; 1YX5; 1YX6; 1Z2M; 1Z5Q; 1Z5S; 1ZGU; 1ZKH; 1ZO6; 1ZW7; 2ASQ; 2AWT; 2AYO; 2BF8; 2BGF; 2BKR; 2BWE; 2BWF; 2BX0; 2C7M; 2C7N; 2C9W; 2CKH; 2D07; 2D3G; 2DAF; 2DEN; 2DX5; 2DZI; 2EKE; 2FAZ; 2FID; 2FIF; 2FNJ; 2FUH; 2G3Q; 2G45; 2G4D; 2GBJ; 2GBK; 2GBM; 2GBN; 2GBR; 2GMI; 2GOW; 2HD5; 2HJ8; 2HTH; 2IBI; 2IO0; 2IO1; 2IO2; 2IO3; 2IY0; 2IY1; 2IYD; 2IZV; 2J7Q; 2JF5; 2JRI; 2JT4; 2JWZ; 2JXX; 2JY6; 2JZ3; 2JZZ; 2K25; 2K39; 2K6D; 2K8B; 2K8C; 2KD0; 2KDB; 2KDE; 2KDF; 2KDI; 2KHW; 2KJH; 2KLC; 2KLG; 2KN5; 2KNB; 2KO3; 2KOX; 2KQS; 2KTF; 2KWU; 2KWV; 2KX0; 2KX3; 2L00; 2L0F; 2L0T; 2L3Z; 2L7R; 2LAS; 2LD9; 2LGD; 2LGY; 2LJ5; 2LVO; 2LVP; 2LVQ; 2LXA; 2LXC; 2NR2; 2NVU; 2O6V; 2OJR; 2OOB; 2PE6; 2PE9; 2PEA; 2QHO; 2RPQ; 2RR9; 2UYZ; 2VRR; 2W9N; 2WDT; 2WWZ; 2WX0; 2WX1; 2WYQ; 2XBB; 2XEW; 2XK5; 2Y5B; 2Z59; 2ZCB; 2ZCC; 2ZEQ; 2ZNV; 2ZVN; 2ZVO; 3A1Q; 3A33; 3A4R; 3A4S; 3A9J; 3A9K; 3AI5; 3ALB; 3AUL; 3AXC; 3B08; 3B0A; 3B1L; 3BY4; 3C0R; 3CMM; 3DBH; 3DBL; 3DBR; 3DCG; 3DQV; 3DVG; 3DVN; 3EEC; 3EFU; 3EHV; 3GZN; 3H1U; 3H7P; 3H7S; 3HM3; 3I3T; 3IFW; 3IHP; 3JSV; 3JVZ; 3JW0; 3K9O; 3K9P; 3KVF; 3KW5; 3KYC; 3KYD; 3L0W; 3L10; 3LDZ; 3M3J; 3M62; 3M63; 3MHS; 3MTN; 3N30; 3N32; 3N3K; 3NHE; 3NOB; 3NS8; 3O65; 3OJ3; 3OJ4; 3OLM; 3ONS; 3PGE; 3PHD; 3PHW; 3PHX; 3PLU; 3PLV; 3PRM; 3PSE; 3PT2; 3PTF; 3Q3F; 3QHT; 3R66; 3RD2; 3RT3; 3RUL; 3RZW; 3SDL; 3TBL; 3TIX; 3TMP; 3U30; 3UF8; 3UGB; 3UIN; 3UIO; 3UIP; 3UQA; 3UQB; 3V60; 3V61; 3V62; 3V6C; 3V6E; 3VAW; 3VFK; 3VHT; 3VUW; 3VUX; 3VUY; 3ZKJ; 3ZNH; 3ZRC; 3ZRF; 3ZTC; 3ZTD; 3ZUN; 4A20; 4AJY; 4ASW; 4AUQ; 4AWJ; 4B95; 4B9K; 4DBG; 4DDG; 4DDI; 4DHJ; 4DHZ; 4DWF; 4EEW; 4F8C; 4FBJ; 4FN2; 4G50; 4GGQ; 4GIV; 4GOC; 4HCN; 4HCP; 4HJK; 4HK2; 4HXD; 4I6L; 4II2; 4II3; 4IUM; |
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