Entry: PS50053

Forthcoming changes to the profile format
General information about the entry

Entry name [info] UBIQUITIN_2
Accession [info] PS50053
Entry type [info] MATRIX
Date [info] NOV-1997 (CREATED); OCT-2013 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00271
Associated ProRule [info] PRU00214

Name and characterization of the entry

Description [info] Ubiquitin domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=76;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=71;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=.1843; R2=.02177539; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=-57.57059; R2=24.02059; TEXT='HScore';
/CUT_OFF: LEVEL=0; SCORE=381; N_SCORE=8.5; H_SCORE=8013; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=290; N_SCORE=6.5; H_SCORE=6908; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=-30; E1=-30; MI=-105; MD=-105; IM=-105; DM=-105; MM=1; M0=-1;
...
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='M'; M= -5,-24,-21,-28,-20,  0,-25,-18, 18,-18, 15, 22,-23,-23,-14,-17,-17, -6, 16,-11, -2,-17;
/M: SY='Q'; M= -8,  4,-23,  5,  6,-23,-16, 10,-21,  1,-21,-10,  4,-13, 11,  2,  6,  2,-18,-27, -5,  7;
/M: SY='I'; M= -7,-30,-21,-34,-27,  3,-34,-27, 34,-27, 27, 17,-26,-26,-23,-24,-20, -7, 29,-23, -3,-27;
/M: SY='T'; M= -9, -3,-18,-12,-10,  4,-20,-12, -8, -8, -3, -5,  3,-19,-10, -6, -1, 12, -7,-21, -3, -9;
/M: SY='V'; M= -5,-30,-15,-31,-26,  7,-31,-26, 26,-25, 25, 14,-29,-29,-26,-21,-18, -5, 32,-24, -4,-26;
/M: SY='K'; M=-11, -3,-28, -4,  4,-25,-19,  0,-25, 31,-24, -6, -1, -9,  7, 25, -7, -7,-18,-22, -8,  5;
/M: SY='T'; M= -1, -4,-16,-12,-12,-10,-18, -9,  0,-10, -6,  0,  1,-17, -9,-10,  4, 11,  3,-29,-10,-11;
/I:         MD=-17;
/M: SY='L'; M= -9,-16,-24,-17, -8, -6,-23,-14,  2,-10,  7,  5,-13,-11, -6, -7,-12, -6, -2,-23, -7, -8;
/I:         MD=-17;
/M: SY='Q'; M= -7,  7,-23,  6,  3,-26, -3, -3,-23,  4,-20,-10,  7,-13, 10,  5,  2, -2,-20,-25,-14,  6; D=-3;
/I:         MD=-17;
/M: SY='G'; M= -1,  1,-26,  2,  3,-30, 14, -1,-28, -3,-23,-12,  2,-13,  9, -6,  1,-11,-24,-22,-17,  6; D=-3;
/I:         I=-4; MI=0; MD=-17; IM=0; DM=-17;
/M: SY='Q'; M=-12,  7,-25,  8, 10,-22,-14,  7,-25,  9,-21,-11,  7,-13, 12, 12, -1, -5,-22,-25, -9, 10; D=-3;
/I:         DM=-17;
/M: SY='T'; M= -3, -1,-19, -1,  2,-18,-13,-13,-12, -5,-13,-10, -2,-13, -3, -8,  9, 11, -6,-30,-14, -1;
/I:         DM=-17;
/M: SY='I'; M= -6,-15,-21,-22,-18,  5,-23,-11,  7,-18,  1,  1, -7,-21,-15,-14, -6, -3,  5,-16,  0,-17;
/M: SY='E'; M= -6, -5,-21, -5, 10,-14,-21,-12,-11, -2,-11, -9, -5, -7,  2, -6,  3,  8, -8,-26,-11,  6;
/M: SY='I'; M= -8,-24,-20,-28,-22, 12,-29,-15, 17,-21, 13,  9,-21,-25,-19,-18,-15, -4, 17,-16,  7,-21;
/M: SY='E'; M=-10,  9,-24, 11, 15,-15,-17, -2,-21, -3,-17,-15,  5,-11,  3, -4,  4,  2,-18,-28,-10,  9;
/M: SY='V'; M= -5,-26,-19,-30,-25, 12,-20,-23, 15,-23, 13, 11,-22,-25,-24,-20,-14, -6, 18,-18, -1,-24;
/M: SY='E'; M= -5,  1,-25,  3,  9,-22, -9, -9,-26,  9,-23,-15,  1, -7,  4,  6,  3, -1,-19,-26,-15,  6;
/M: SY='P'; M= -5,-13,-26,-11, -4,-16,-15,-16, -5,-13, -6, -6,-11,  8,-10,-13, -6, -6, -7,-28,-17, -9;
/M: SY='S'; M= -1,  2,-21,  3, 10,-26,-10, -8,-23,  6,-24,-14,  3, -9, 10,  1, 13,  8,-17,-29,-15, 10;
/M: SY='E'; M= -8,  8,-27, 12, 13,-24,-14, -3,-21,  3,-18, -7,  2, -7,  8, -2, -2, -7,-20,-22,-14, 10;
/M: SY='T'; M=  0, -2,-13, -9, -8,-13,-18,-17,-10,-10,-12,-10,  0, -7, -7,-10, 17, 35, -2,-31,-12, -8;
/M: SY='V'; M= -2,-25,-14,-29,-27, -1,-30,-27, 28,-20,  9, 11,-24,-25,-24,-20, -8,  5, 38,-28, -8,-26;
/M: SY='Q'; M=  0, -6,-22, -6,  0,-15,-11, -5,-16, -3,-12, -8, -4,-10,  3, -6,  1, -4,-14,-23, -8,  1;
/M: SY='E'; M= -8, -1,-24,  1, 12,-20,-20,  4,-12, -5, -7, -5, -2,-14,  8, -6, -3, -6,-12,-28, -9,  9;
/M: SY='L'; M=-10,-25,-22,-28,-19,  7,-30,-20, 16,-19, 27, 13,-22,-25,-17,-12,-22, -7, 10,-19,  0,-19;
/M: SY='K'; M= -8, -2,-29, -3,  7,-28,-20,-11,-25, 42,-26, -9, -1,-11,  8, 27,-10,-10,-17,-20,-10,  7;
/M: SY='E'; M= -1, -1,-23,  0, 11,-22,-17, -6,-15,  2, -9, -7, -3,-13, 11,  0, -3, -5,-14,-25,-13, 10;
/M: SY='H'; M=-10, -9,-26,-11, -2,-19,-22, 13,-11,  8, -8,  6, -6,-17, 10,  6,-11,-11,-11,-22, -2,  3;
/I:         MD=-25;
/M: SY='I'; M= -7,-22,-24,-26,-18, -4,-27,-23, 25,-22, 14, 10,-17,-22,-17,-21,-15, -8, 19,-24, -7,-20;
/I:         MD=-25;
/M: SY='E'; M=  8, -1,-20, -3, 12,-22,-12, -3,-17,  0,-16,-11,  0, -9,  8, -1,  6, -1,-14,-25,-15,  9; D=-5;
/I:         I=-6; MI=0; IM=0; DM=-25;
/M: SY='E'; M= -7,  6,-27, 11, 13,-29, -1, -3,-28,  4,-24,-15,  3,-11, 12,  1,  2, -8,-25,-25,-14, 12;
/I:         DM=-25;
/M: SY='R'; M= -5, -7,-24, -7,  4,-19,-18,-10,-14,  8,-13, -8, -4,-10,  1, 13, -3, -5,-10,-25,-13,  1;
/M: SY='E'; M=-10, -2,-26, -2,  8,-18,-19, -7, -6, -4, -7, -2, -4,-13,  6, -7, -6, -5, -9,-23, -7,  6;
/M: SY='G'; M=  5, -4,-24, -7, -9,-26, 33,-15,-30, -9,-26,-17,  3,-16,-10,-10,  7, -7,-22,-24,-24,-10;
/M: SY='V'; M= -7,-23,-15,-27,-22, -1,-28,-22, 17,-15,  3,  9,-18,-19,-18,-14,-10, -4, 19,-24, -6,-21;
/M: SY='P'; M= -9, -9,-33, -2,  7,-27,-19,  1,-21, -5,-23,-14, -9, 40,  2, -9, -7,-10,-26,-29,-18,  1;
/M: SY='P'; M=  0,-13,-23,-12, -4,-17,-18,-15, -2,-10, -9,  0,-13,  9, -6,-14, -2, -2, -1,-28,-16, -6;
/M: SY='D'; M= -2, 13,-22, 15,  9,-21,  2, -7,-26, -6,-23,-20, 11,-12, -3,-10,  8, -4,-21,-30,-18,  3;
/M: SY='Q'; M= -9,  3,-26,  4,  9,-19,-10, -4,-23,  4,-20,-11,  3,-13, 13,  3,  1, -6,-21,-24,-11, 11;
/M: SY='Q'; M=-11, -9,-28,-11,  6,-21,-24,  0, -5, -2, -6,  5, -7,-15, 34,  0, -7,-10,-16,-18, -5, 20;
/M: SY='R'; M=-12,-11,-28,-12, -3,-19,-20, -9,-22, 25,-19, -9, -7,-18,  3, 38,-11,-10,-13, -8, -8, -2;
/M: SY='L'; M=-10,-30,-19,-31,-23, 19,-30,-21, 18,-29, 40, 16,-29,-30,-24,-20,-26, -9, 13,-17,  3,-23;
/M: SY='I'; M= -5,-24,-24,-30,-21,  0,-30,-19, 25,-23, 21, 15,-19,-22,-13,-21,-16, -6, 14,-18,  1,-19;
/I:         MD=-20;
/M: SY='F'; M=-13,-22,-23,-26,-20, 34,-26, -2, -1,-16,  5,  1,-17,-27,-20,-13,-16, -8, -3,  5, 34,-20;
/I:         I=-8; MI=-15; IM=-15; DM=-15; MD=-15;
/M: SY='E'; M=  4,  9,-23, 13, 14,-29, -6, -7,-26,  5,-23,-17,  4, -9,  8, -4,  7, -4,-20,-29,-18, 11;
/I:         DM=-20;
/M: SY='G'; M= -1, -6,-29, -6,-17,-30, 62,-19,-39,-19,-29,-20,  1,-19,-19,-19,  1,-17,-29,-21,-29,-18;
/M: SY='K'; M= -7, -8,-27,-10,  0,-21,-21, -9,-14, 21,-15, -2, -5,-15,  7, 20, -8, -8,-10,-21, -9,  2;
/M: SY='V'; M= -7,-19,-24,-20,-10, -6,-25,-16,  2,-10, -1,  0,-16, -6, -8, -4,-10, -6,  3,-22, -8,-10;
/M: SY='L'; M=-10,-30,-21,-32,-22,  7,-31,-21, 25,-29, 42, 21,-28,-28,-20,-21,-27,-10, 15,-20,  0,-22;
/M: SY='E'; M= -8,  7,-27,  9, 19,-29,-16,  3,-25, 13,-21,-11,  5,-10, 18,  9, -1, -8,-23,-27,-13, 18;
/M: SY='D'; M=-11, 40,-27, 55, 18,-37, -9, -2,-36, -1,-28,-27, 16,-10,  0,-11,  3, -8,-26,-38,-20,  9;
/I:         MD=-20;
/M: SY='D'; M= -9, 15,-25, 16,  8,-26, -1,  1,-27,  1,-24,-15, 15,-13,  3, -2,  5, -4,-23,-32,-17,  5;
/I:         I=-8; MI=-15; IM=-15; DM=-15; MD=-15;
/M: SY='Q'; M= -5, -6,-23, -9,  2,-19,-20, -3,-10,  6, -7,  1, -5,-16, 11,  4, -6, -4,-10,-23, -8,  6;
/I:         DM=-20;
/M: SY='T'; M= -1, -7,-11,-12, -9,-11,-19,-19,-12,-10,-13,-11, -5,  2,-11,-12, 11, 26, -6,-29,-13,-10;
/M: SY='L'; M= -7,-27,-21,-26,-18,  0,-27,-20, 15,-23, 26, 13,-26,-11,-18,-19,-20, -7, 11,-24, -7,-19;
/M: SY='S'; M=  4, -1,-21, -1,  3,-26,  5,-10,-25,  0,-23,-15,  2,-12,  3, -1, 10,  0,-18,-27,-19,  2;
/M: SY='D'; M= -6, 16,-26, 24, 24,-24,-14, -2,-27,  0,-21,-19,  5, -8,  7, -7,  3, -6,-23,-28,-13, 16;
/M: SY='Y'; M= -9,-21,  6,-24,-20,  7,-27, -5, -2,-19,  8,  0,-21,-30,-14,-17,-17, -9, -4, -7, 23,-19;
/M: SY='G'; M= -7,  8,-28,  6, -7,-28, 30,  0,-34, -6,-29,-18, 15,-18, -8, -7,  0,-14,-29,-27,-20, -8;
/M: SY='I'; M= -9,-28,-22,-34,-25,  7,-31,-21, 30,-25, 26, 25,-24,-25,-19,-21,-21, -8, 22,-20,  0,-23;
/M: SY='E'; M= -2,  5,-24,  6, 15,-27, -9, -6,-23,  5,-21,-13,  3,-10, 11, -1,  4, -1,-19,-27,-16, 13;
/M: SY='D'; M= -7, 16,-28, 25, 17,-31,-12, -7,-29,  1,-27,-22,  6, 12,  1, -8,  3, -6,-25,-34,-21,  8;
/M: SY='G'; M= -4, -2,-27, -2,  1,-25, 15,-10,-26, -4,-18,-12,  1,-16,  0, -4, -2,-11,-22,-24,-19,  0;
/M: SY='B'; M= -2, 12, -5,  9, -1,-23,-11, -4,-21, -8,-21,-15, 10,-15, -2,-10, 11,  8,-15,-35,-16, -2;
/M: SY='T'; M= -2, -8,-17,-13, -6, -7,-20,-15, -7, -6, -9, -6, -5,-14, -4, -5,  7, 16, -1,-25, -8, -5;
/M: SY='V'; M= -5,-28,-18,-32,-27,  1,-33,-28, 32,-24, 19, 14,-25,-26,-24,-23,-15, -2, 34,-25, -5,-27;
/M: SY='H'; M=-12, -8,-25, -8,  0, -8,-24, 18, -4,-11, -3,  4, -7,-18, -3,-10,-10, -9, -4,-23,  4, -4;
/M: SY='L'; M= -1,-24,-17,-27,-19,  4,-24,-19, 14,-19, 23, 15,-23,-25,-18,-16,-16, -4, 15,-21, -4,-18;
/M: SY='M'; M= -1,-15,-18,-20,-17, -7,-21, -1, 10,-13,  1, 13,-11,-22, -9,-13, -8, -6, 13,-24, -2,-14;
/M: SY='L'; M= -7,-18,-20,-18,-16, -7,-14,-18,  5,-14, 10,  7,-18,-25,-14,-10,-14, -8, 10,-24,-10,-16;
/M: SY='R'; M=-11, -1,-26, -1,  7,-22,-19, -1,-22, 16,-20,-10,  1,-13,  8, 23,  0,  0,-16,-25,-10,  5;
/M: SY='Q'; M= -9, -6,-26, -7,  6,-21,-16, -4,-12,  7, -5,  5, -6,-15, 14,  3,-10,-10,-15,-22, -9, 10;
/M: SY='R'; M= -9,-10,-15,-12, -7,-18,-20,-13,-16,  1,-14,-10, -5,  1, -5, 11, -4,  0,-13,-28,-15, -8;
/M: SY='G'; M= -2, -1,-26, -2, -9,-27, 33,-14,-33, -4,-29,-18,  5,-16, -9, -8,  6, -8,-24,-25,-23, -9;
/M: SY='G'; M=  3, -9,-28, -8, -8,-28, 39,-18,-32,-15,-28,-19, -3, -1,-13,-18,  2,-13,-26,-24,-28,-12;
/I:         E1=0; IE=-105; DE=-105;
» More

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 759 in 484 different sequences
Number of true positive hits 751 in 476 different sequences
Number of 'unknown' hits 2 in 2 different sequences
Number of false positive hits 6 in 6 different sequences
Number of false negative sequences 53
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.21 %
Recall (true positives / (true positives + false negatives)) 93.41 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] K_Hofmann
Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 11
Feature key [info] DOMAIN
Feature description [info] Ubiquitin-like
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
476 sequences

ALP11_SCHPO (Q10235), ANR60_HUMAN (Q9BZ19), BAG1A_SCHPO (O60125), 
BAG1_ARATH  (Q0WUQ1), BAG1_CAEBR  (Q61D31), BAG1_CAEEL  (O44739), 
BAG1_HUMAN  (Q99933), BAG1_MOUSE  (Q60739), BAG1_RAT    (B0K019), 
BAG2_ARATH  (Q0WPX7), BAG3_ARATH  (Q9LYP4), BAG4_ARATH  (Q8RX71), 
BAG6A_XENLA (Q9YHD3), BAG6B_XENLA (Q6PA26), BAG6_DANRE  (A3KPW9), 
BAG6_HUMAN  (P46379), BAG6_MOUSE  (Q9Z1R2), BAG6_ORNAN  (A7X5R6), 
BAG6_PIG    (A5D9M6), BAG6_RAT    (Q6MG49), BAG6_XENTR  (A4IH17), 
DDI1_ASPCL  (A1CDT9), DDI1_ASPFU  (Q4WGS4), DDI1_ASPOR  (Q2USD7), 
DDI1_ASPTN  (Q0CJ13), DDI1_BOVIN  (Q2T9Z1), DDI1_CANGA  (Q6FQE9), 
DDI1_CHAGB  (Q2H085), DDI1_COCIM  (Q1DNB9), DDI1_DEBHA  (Q6BK42), 
DDI1_DICDI  (Q54JB0), DDI1_EMENI  (Q5AY89), DDI1_HUMAN  (Q8WTU0), 
DDI1_MACFA  (Q95JI3), DDI1_MOUSE  (Q9DAF3), DDI1_NEOFI  (A1DCU5), 
DDI1_NEUCR  (Q7S906), DDI1_PHANO  (Q0U3Y6), DDI1_RAT    (A0JPP7), 
DDI1_YARLI  (Q6CFI3), DDI2_DANRE  (Q6TH22), DDI2_HUMAN  (Q5TDH0), 
DDI2_MOUSE  (A2ADY9), DDI2_XENLA  (Q7ZYA7), DDI2_XENTR  (Q497D6), 
DSK2A_ARATH (Q9SII9), DSK2B_ARATH (Q9SII8), DSK2_SCHPO  (Q10169), 
DSK2_YEAST  (P48510), ELOB_HUMAN  (Q15370), ELOB_MOUSE  (P62869), 
ELOB_RAT    (P62870), HERP1_HUMAN (Q15011), HERP1_MOUSE (Q9JJK5), 
HERP1_PONAB (Q5R5B0), HERP2_BOVIN (Q0P5H8), HERP2_DANRE (Q6NYI0), 
HERP2_HUMAN (Q9BSE4), HERP2_MOUSE (Q9JJC9), HERP2_RAT   (Q66HH4), 
HERP2_XENLA (Q7ZXQ3), HERP2_XENTR (Q28DF1), HOIL1_HUMAN (Q9BYM8), 
HOIL1_MOUSE (Q9WUB0), HOIL1_RAT   (Q62921), HUB1_ASHGO  (Q756X3), 
HUB1_CANGA  (Q6FIX7), HUB1_KLULA  (Q6CU12), HUB1_SCHPO  (O94650), 
HUB1_YEAST  (Q6Q546), IQUB_HUMAN  (Q8NA54), IQUB_MACFA  (Q4R6T7), 
ISG15_BOVIN (O02741), ISG15_HUMAN (P05161), ISG15_MOUSE (Q64339), 
MDY2_YEAST  (Q12285), MIDNA_XENLA (Q7ZWN4), MIDNB_XENLA (Q7ZWX9), 
MIDN_DANRE  (Q6NYU6), MIDN_HUMAN  (Q504T8), MIDN_MOUSE  (Q3TPJ7), 
MIDN_XENTR  (Q5EB28), MUB1_ARATH  (Q9MAB9), MUB1_ORYSJ  (Q75GT2), 
MUB3_ARATH  (Q9SW27), MUB3_ORYSJ  (Q6Z8K4), MUB4_ARATH  (Q9LSD8), 
MUB5_ARATH  (Q9SH14), MUB6_ARATH  (Q8GWJ6), NED81_DICDI (Q54TK0), 
NED82_DICDI (Q54L35), NEDD8_BOVIN (P61282), NEDD8_CAEEL (Q93725), 
NEDD8_DICDI (Q54XV3), NEDD8_DROME (Q9VJ33), NEDD8_HUMAN (Q15843), 
NEDD8_MOUSE (P29595), NEDD8_RABIT (Q4PLJ0), NEDD8_RAT   (Q71UE8), 
NF2IP_HUMAN (Q8NCF5), NF2IP_MACFA (Q9GLZ9), NF2IP_MOUSE (O09130), 
NF2IP_RAT   (Q6AYG7), NPL4_ORYSJ  (Q9AS33), OASL1_MOUSE (Q8VI94), 
OASL1_RAT   (G3V645), OASL2_MOUSE (Q9Z2F2), OASL2_RAT   (Q5MYT9), 
OASL_HUMAN  (Q15646), OTU1_DANRE  (Q567B1), P4KG2_ARATH (Q9SGW8), 
P4KG3_ARATH (Q9FNF8), P4KG4_ARATH (Q9ZPY9), PIRL8_ORYSJ (Q7XDQ7), 
PMT3_SCHPO  (O13351), PRKN2_HUMAN (O60260), PRKN2_MOUSE (Q9WVS6), 
PRKN2_RAT   (Q9JK66), R27AA_ARATH (P59271), R27AA_ORYSJ (Q9ARZ9), 
R27AB_ARATH (P59232), R27AB_ORYSJ (P51431), R27AC_ARATH (P59233), 
RAD23_DICDI (Q54LV1), RAD23_ORYSJ (Q40742), RAD23_YEAST (P32628), 
RD23A_ARATH (Q84L32), RD23A_BOVIN (A3KMV2), RD23A_HUMAN (P54725), 
RD23A_MOUSE (P54726), RD23B_ARATH (Q84L33), RD23B_BOVIN (Q29RK4), 
RD23B_HUMAN (P54727), RD23B_MOUSE (P54728), RD23B_RAT   (Q4KMA2), 
RD23C_ARATH (Q84L31), RD23D_ARATH (Q84L30), RHP23_SCHPO (O74803), 
RL401_CHLRE (P0CH11), RL401_SCHPO (P0CH06), RL401_YEAST (P0CH08), 
RL402_SCHPO (P0CH07), RL402_TRYCR (P0CH27), RL402_YEAST (P0CH09), 
RL403_CHLRE (P0CH10), RL40A_ARATH (B9DHA6), RL40A_ORYSJ (P0CH34), 
RL40B_ARATH (Q42202), RL40B_ORYSJ (P0CH35), RL40_ACACA  (P49633), 
RL40_BOVIN  (P63048), RL40_BRARP  (P51423), RL40_CAEEL  (P49632), 
RL40_CANFA  (P63050), RL40_CRYNJ  (P40909), RL40_DICDI  (P14794), 
RL40_DROME  (P18101), RL40_EIMBO  (P46575), RL40_FELCA  (P63052), 
RL40_HUMAN  (P62987), RL40_LEIMA  (P69201), RL40_LEITA  (P69200), 
RL40_MACFA  (P0C273), RL40_MOUSE  (P62984), RL40_NEUCR  (P0C224), 
RL40_NICSY  (P49636), RL40_OPHHA  (P68205), RL40_PIG    (P63053), 
RL40_PONPY  (P0C275), RL40_RAT    (P62986), RL40_SHEEP  (P0C276), 
RL40_TETPY  (P33190), RL40_TETTS  (P0DJ25), RL40_TRYBB  (P21899), 
RL40_TRYCR  (P14795), RS271_HORVU (P0CG86), RS272_HORVU (P0CG87), 
RS27A_ASPOF (P31753), RS27A_BOVIN (P62992), RS27A_CAEBR (P37164), 
RS27A_CAEEL (P37165), RS27A_CAVPO (P62978), RS27A_CHICK (P79781), 
RS27A_DAUCA (P59272), RS27A_DICDI (P14797), RS27A_DROME (P15357), 
RS27A_HUMAN (P62979), RS27A_ICTPU (P68200), RS27A_KLULA (P69061), 
RS27A_LUPAL (P47905), RS27A_MAIZE (P27923), RS27A_MANSE (P29504), 
RS27A_MOUSE (P62983), RS27A_NEUCR (P14799), RS27A_PLUXY (P68202), 
RS27A_RAT   (P62982), RS27A_SCHPO (P0C016), RS27A_SOLLC (P62980), 
RS27A_SOLTU (P62981), RS27A_SPOFR (P68203), RS27A_YEAST (P05759), 
RS27B_SCHPO (P0C8R3), RUB1_ARATH  (Q9SHE7), RUB1_DESAN  (P0C073), 
RUB1_ORYSJ  (P0C030), RUB1_YEAST  (Q03919), RUB2_ARATH  (Q8RUC6), 
RUB2_ORYSJ  (P0C031), RUB3_ARATH  (O65381), RUB3_ORYSJ  (P0C032), 
SACS_HUMAN  (Q9NZJ4), SF3A1_ARATH (Q8RXF1), SF3A1_BOVIN (A2VDN6), 
SF3A1_DICDI (Q86A14), SF3A1_HUMAN (Q15459), SF3A1_MOUSE (Q8K4Z5), 
SMO1A_XENLA (O57686), SMO1B_XENLA (Q5EAX4), SMO2A_XENLA (Q7ZTK7), 
SMO2B_XENLA (Q6GPW2), SMO3L_DANRE (Q6NV25), SMT3_YEAST  (Q12306), 
SNR25_HUMAN (Q9BV90), STA1_ARATH  (Q9ZT71), SUMO1_ARATH (P55852), 
SUMO1_BOVIN (Q5E9D1), SUMO1_CERNI (Q9MZD5), SUMO1_CHICK (Q8QGH2), 
SUMO1_DANRE (Q7SZR5), SUMO1_HUMAN (P63165), SUMO1_MOUSE (P63166), 
SUMO1_ONCMY (Q9PT08), SUMO1_ORYSJ (P55857), SUMO1_PIG   (A7WLH8), 
SUMO1_PONAB (Q5R6J4), SUMO1_RAT   (Q5I0H3), SUMO1_SPETR (Q2EF74), 
SUMO1_XENTR (Q6DEP7), SUMO2_ARATH (Q9FLP6), SUMO2_BOVIN (P61955), 
SUMO2_CHICK (Q5ZJM9), SUMO2_CRIGR (Q6LDZ8), SUMO2_DANRE (Q6DHL4), 
SUMO2_HUMAN (P61956), SUMO2_MACFA (Q2PFW2), SUMO2_MOUSE (P61957), 
SUMO2_PIG   (P61958), SUMO2_RAT   (P61959), SUMO2_XENTR (Q28H04), 
SUMO3_ARATH (Q9FLP5), SUMO3_BOVIN (Q17QV3), SUMO3_CHICK (Q5ZHQ1), 
SUMO3_DANRE (Q6DI05), SUMO3_HUMAN (P55854), SUMO3_MOUSE (Q9Z172), 
SUMO3_RAT   (Q5XIF4), SUMO3_XENLA (Q7SZ22), SUMO3_XENTR (Q6DK72), 
SUMO4_ARATH (Q9FKC5), SUMO4_HUMAN (Q6EEV6), SUMO4_PIG   (A7WLI0), 
SUMO5_ARATH (Q8VZI7), SUMO6_ARATH (Q9FKC6), SUMO7_ARATH (Q3E8A8), 
SUMO8_ARATH (B3H5R8), SUMO_CAEEL  (P55853), TAF1B_ARATH (Q6PUA2), 
TAF1_ARATH  (Q8LRK9), TAF1_ORYSJ  (Q67W65), TBCEL_HUMAN (Q5QJ74), 
TBCEL_RAT   (Q5PQJ7), TBP1_ORYSJ  (Q9LL45), TECR_CAEEL  (Q9N5Y2), 
TMUB1_BOVIN (Q3ZBI9), TMUB1_DANRE (Q6P135), TMUB1_HUMAN (Q9BVT8), 
TMUB1_MOUSE (Q9JMG3), TMUB1_RAT   (Q53AQ4), TMUB1_XENLA (Q3KPV4), 
TMUB1_XENTR (Q4V9Y1), TMUB2_BOVIN (Q2HJA8), TMUB2_HUMAN (Q71RG4), 
TMUB2_MOUSE (Q3V209), TMUB2_RAT   (Q4FZV7), TRP1_ARATH  (Q8L7L8), 
TRP2_ARATH  (Q9SNB9), TRP4_ARATH  (Q9FFY9), UB4AA_ONCMY (C1BGZ8), 
UB4AA_SALSA (B5XFI8), UB4AB_ONCMY (C1BHN7), UB4AB_SALSA (B5X9S9), 
UBAC1_CHICK (Q5ZJI9), UBAC1_XENTR (Q28DG7), UBB_BOVIN   (P0CG53), 
UBB_CAVPO   (P0CG54), UBB_CHICK   (P0CG62), UBB_GORGO   (P0CG67), 
UBB_HORSE   (Q8MKD1), UBB_HUMAN   (P0CG47), UBB_MOUSE   (P0CG49), 
UBB_PANTR   (P0CG65), UBB_PONPY   (P0CG60), UBB_RAT     (P0CG51), 
UBB_SHEEP   (P0CG55), UBCP1_BOVIN (Q2KJD7), UBCP1_CHICK (Q5ZJJ8), 
UBCP1_DANRE (Q6DI37), UBCP1_HUMAN (Q8WVY7), UBCP1_MOUSE (Q8BGR9), 
UBCP1_PONAB (Q5R4C4), UBCP1_RAT   (Q5FWT7), UBCP1_XENLA (Q641F1), 
UBCP1_XENTR (Q28EX9), UBCP_ARATH  (Q8W3M6), UBC_BOVIN   (P0CH28), 
UBC_GORGO   (P0CG66), UBC_HUMAN   (P0CG48), UBC_MOUSE   (P0CG50), 
UBC_PANTR   (P0CG64), UBC_PIG     (P0CG68), UBC_PONPY   (P0CG61), 
UBC_RAT     (Q63429), UBD_HUMAN   (O15205), UBD_MOUSE   (P63072), 
UBD_RAT     (Q921A3), UBFD1_HUMAN (O14562), UBFD1_MOUSE (Q78JW9), 
UBI1P_CANAX (P0CG73), UBI1P_NICSY (P0CG85), UBI1P_PETCR (P0CH04), 
UBI2P_PETCR (P0CH05), UBI4P_CANAX (P0CG74), UBI4P_KLULA (P0CG75), 
UBI4P_NEUCR (P0CG70), UBI4P_NICSY (P0CG84), UBI4P_SCHPO (P0CG72), 
UBI4P_YEAST (P0CG63), UBIL_NPVAC  (P16709), UBIL_NPVOP  (Q05120), 
UBIML_HUMAN (A6NDN8), UBIM_BOVIN  (P62865), UBIM_CRIGR  (Q60435), 
UBIM_HUMAN  (P35544), UBIM_MOUSE  (P35545), UBIM_MUSSI  (P62868), 
UBIM_PIG    (P55812), UBIM_PONAB  (P0C2F1), UBIM_RAT    (Q05474), 
UBIQ1_CAEEL (P0CG71), UBIQA_DICDI (P0CG76), UBIQD_DICDI (P0CG77), 
UBIQF_DICDI (P0CG78), UBIQG_DICDI (P0CG79), UBIQH_DICDI (P0CG81), 
UBIQI_DICDI (P0CG80), UBIQJ_DICDI (P0CG88), UBIQP_ACEPE (P42739), 
UBIQP_AGLNE (P42740), UBIQP_AVEFA (P69309), UBIQP_CRIGR (P62976), 
UBIQP_DROME (P0CG69), UBIQP_EUPEU (P23324), UBIQP_GEOCY (P59669), 
UBIQP_HORVU (P0CG83), UBIQP_LINUS (P69315), UBIQP_PEA   (P69322), 
UBIQP_PHYIN (P22589), UBIQP_SOYBN (P69325), UBIQP_STRPU (P23398), 
UBIQP_TETPY (P0CG82), UBIQP_XENLA (P62972), UBIQ_AVESA  (P69310), 
UBIQ_CAMDR  (Q865C5), UBIQ_CERCA  (P68197), UBIQ_COPCO  (P19848), 
UBIQ_ENCCU  (Q8SWD4), UBIQ_HELAN  (P69313), UBIQ_LUMTE  (P84589), 
UBIQ_LUPPO  (P69317), UBIQ_RABIT  (P62975), UBIQ_WHEAT  (P69326), 
UBL1_SCHPO  (O14399), UBL3_BOVIN  (Q2TA46), UBL3_HUMAN  (O95164), 
UBL3_MOUSE  (Q9Z2M6), UBL3_RAT    (Q5BJT2), UBL4A_ANOFI (C3KHF2), 
UBL4A_CALJA (B0KWT6), UBL4A_CALMO (B1MTV8), UBL4A_DANRE (Q7ZWB2), 
UBL4A_ESOLU (C1BXU5), UBL4A_HUMAN (P11441), UBL4A_MOUSE (P21126), 
UBL4A_PONAB (Q5R4T1), UBL4A_RABIT (B7NZQ9), UBL4A_RAT   (B2GV38), 
UBL4A_RHIFE (B2KIK3), UBL4A_XENLA (Q0D261), UBL4A_XENTR (A4QND0), 
UBL4B_BOVIN (Q2T9Q2), UBL4B_HUMAN (Q8N7F7), UBL4B_MONDO (Q19KS6), 
UBL4B_MOUSE (Q9CQ84), UBL5_ARATH  (Q9FGZ9), UBL5_CAEEL  (P91302), 
UBL5_DROME  (Q9V998), UBL7_BOVIN  (Q2KIS3), UBL7_HUMAN  (Q96S82), 
UBL7_MOUSE  (Q91W67), UBP14_BOVIN (Q0IIF7), UBP14_HUMAN (P54578), 
UBP14_MOUSE (Q9JMA1), UBP14_PANTR (P60051), UBP14_RABIT (P40826), 
UBP26_ARATH (Q9SCJ9), UBP26_ORYSI (A2XDG4), UBP26_ORYSJ (A3AF13), 
UBP48_CHICK (Q5ZM45), UBP48_HUMAN (Q86UV5), UBP48_MOUSE (Q3V0C5), 
UBP48_RAT   (Q76LT8), UBP6_ARATH  (Q949Y0), UBP6_SCHPO  (Q92353), 
UBP7_ARATH  (Q84WC6), UBQ10_ARATH (Q8H159), UBQ11_ARATH (P0CH33), 
UBQ12_ARATH (Q3E7K8), UBQ14_ARATH (Q3E7T8), UBQ3_ARATH  (Q1EC66), 
UBQ3_ORYSJ  (Q58G87), UBQ4_ARATH  (P0CH32), UBQ8_ARATH  (Q39256), 
UBQ9_ARATH  (Q9FHQ6), UBQL1_HUMAN (Q9UMX0), UBQL1_MOUSE (Q8R317), 
UBQL1_PONAB (Q5R684), UBQL1_RAT   (Q9JJP9), UBQL2_HUMAN (Q9UHD9), 
UBQL2_MOUSE (Q9QZM0), UBQL3_HUMAN (Q9H347), UBQL3_MOUSE (Q8C5U9), 
UBQL4_HUMAN (Q9NRR5), UBQL4_MOUSE (Q99NB8), UBQLN_HUMAN (Q8IYU4), 
UBQLN_MOUSE (Q14DL0), UBQLN_RAT   (Q5XIP4), UBQL_DICDI  (Q9NIF3), 
UBTD1_BOVIN (Q3ZBQ1), UBTD1_DANRE (Q4V8W7), UBTD1_HUMAN (Q9HAC8), 
UBTD1_MOUSE (Q91WB7), UBTD1_RAT   (Q68FV8), UBTD1_XENLA (Q640W6), 
UBTD2_BOVIN (Q5EAE3), UBTD2_DANRE (Q6DG43), UBTD2_HUMAN (Q8WUN7), 
UBTD2_MOUSE (Q6PGH0), UHRF1_BOVIN (A7E320), UHRF1_DANRE (E7EZF3), 
UHRF1_HUMAN (Q96T88), UHRF1_MOUSE (Q8VDF2), UHRF1_RAT   (Q7TPK1), 
UHRF1_XENLA (B6CHA3), UHRF1_XENTR (F6UA42), UHRF2_HUMAN (Q96PU4), 
UHRF2_MOUSE (Q7TMI3), UPL5_ARATH  (Q9SU29), USA1_YEAST  (Q03714), 
Y2010_ARATH (P0C895), YB92_SCHPO  (O42967), YHLC_SCHPO  (Q9HGL0), 
YKA4_CAEEL  (P34256), YO25_CAEEL  (P34675), YQ77_SCHPO  (O94580), 
ZFAN4_HUMAN (Q86XD8), ZFAN4_MOUSE (D3Z3C6)
» More

UniProtKB/Swiss-Prot
False negative sequences
53 sequences

DDI1_ASHGO  (Q754R2), DDI1_CRYNB  (P0CS15), DDI1_CRYNJ  (P0CS14), 
DDI1_KLULA  (Q6CNS3), DDI1_YEAST  (P40087), HOIL1_DANRE (A9JTG5), 
HOIL1_DICLA (E6ZIJ1), HUB1_DEBHA  (Q6BUP7), IQUB_MOUSE  (Q8CDK3), 
IQUB_RAT    (Q45GW3), MUB2_ARATH  (Q8LCS8), MUB2_ORYSJ  (Q67UI2), 
MUB4_ORYSJ  (Q7XRU4), NF2IP_XENTR (Q0P4K8), OTU1_CHICK  (Q5F3A6), 
OTU1_DROME  (Q9VRJ9), OTU1_DROPS  (Q29FC9), OTU1_XENLA  (Q0IH43), 
P4KG5_ARATH (Q9C671), P4KG6_ARATH (Q8W4R8), P4KG7_ARATH (Q9SI52), 
RL40_CHICK  (P62985), SACS_MOUSE  (Q9JLC8), SHRPN_BOVIN (E1BDF2), 
SHRPN_HUMAN (Q9H0F6), SHRPN_MOUSE (Q91WA6), SHRPN_RAT   (Q9EQL9), 
SNR25_BOVIN (Q3ZBQ4), SNR25_MOUSE (Q8VIK1), TBCEL_MOUSE (Q8C5W3), 
TBK1_HUMAN  (Q9UHD2), TBK1_MOUSE  (Q9WUN2), TRP3_ARATH  (Q9C7B1), 
TRP5_ARATH  (Q6R0E3), TRP6_ARATH  (Q9M347), U1125_ARATH (Q84WS8), 
UBAC1_HUMAN (Q9BSL1), UBAC1_MOUSE (Q8VDI7), UBAC1_RAT   (Q5XIR9), 
UBL5_BOVIN  (Q3T0Z3), UBL5_DANRE  (Q7SXF2), UBL5_DICDI  (Q54Q03), 
UBL5_HUMAN  (Q9BZL1), UBL5_MESAU  (Q6EGX7), UBL5_MOUSE  (Q9EPV8), 
UBL5_PSAOB  (Q791B0), UBP4_BOVIN  (A6QR55), UBP4_HUMAN  (Q13107), 
UBP4_MOUSE  (P35123), UBP4_PONAB  (Q5RCD3), UBP4_RAT    (B2GUZ1), 
UBP6_YEAST  (P43593), UBTD1_XENTR (Q6GL38)
» More

UniProtKB/Swiss-Prot
'Unknown' sequences
2 sequences

ESC2_ASHGO  (Q756K3), ESC2_YEAST  (Q06340)

		
UniProtKB/Swiss-Prot
False positive sequences
6 sequences

ANKUB_HUMAN (A6NFN9), CYSI_BACA2  (A7Z8R5), IKKB_HUMAN  (O14920), 
RAD60_SCHPO (Q9USX3), TBCE_BOVIN  (Q32KS0), YN67_SCHPO  (O94511)
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PDB
[Detailed view]
395 PDB

1A5R; 1AAR; 1BT0; 1C3T; 1CMX; 1D3Z; 1EUV; 1F9J; 1FXT; 1G6J; 1GJZ; 1IYF; 1J8C; 1L2N; 1LM8; 1LQB; 1M94; 1MG8; 1NBF; 1NDD; 1OGW; 1OQY; 1OTR; 1P1A; 1P3Q; 1P98; 1P9D; 1Q0W; 1Q5W; 1QZE; 1R4M; 1R4N; 1S1Q; 1SE9; 1SIF; 1TBE; 1TGZ; 1TTN; 1U4A; 1UBI; 1UBQ; 1UD7; 1UEL; 1UZX; 1V5O; 1V5T; 1V80; 1V81; 1V86; 1VCB; 1WE6; 1WE7; 1WGD; 1WGG; 1WGH; 1WH3; 1WIA; 1WM2; 1WM3; 1WR1; 1WR6; 1WRD; 1WX7; 1WX9; 1WXV; 1WY8; 1WYW; 1WZ0; 1X1M; 1XD3; 1XQQ; 1XT9; 1Y8R; 1YD8; 1YQB; 1YX5; 1YX6; 1Z2M; 1Z5S; 1ZGU; 1ZKH; 1ZW7; 2ASQ; 2AWT; 2AYO; 2BF8; 2BGF; 2BKR; 2BWE; 2BWF; 2C7M; 2C7N; 2C9W; 2CKH; 2D07; 2D3G; 2DAF; 2DEN; 2DX5; 2DZI; 2EKE; 2FAZ; 2FID; 2FIF; 2FNJ; 2FUH; 2G3Q; 2G45; 2G4D; 2GBJ; 2GBK; 2GBM; 2GBN; 2GBR; 2GMI; 2GOW; 2HD5; 2HJ8; 2HTH; 2IBI; 2IO0; 2IO1; 2IO2; 2IO3; 2IY0; 2IY1; 2IYD; 2IZV; 2J7Q; 2JF5; 2JRI; 2JT4; 2JWZ; 2JXX; 2JY6; 2JZ3; 2JZZ; 2K25; 2K39; 2K6D; 2K8B; 2K8C; 2KD0; 2KDB; 2KDE; 2KDF; 2KDI; 2KHW; 2KJH; 2KLC; 2KLG; 2KN5; 2KNB; 2KO3; 2KOX; 2KQS; 2KTF; 2KWU; 2KWV; 2KX0; 2KX3; 2L00; 2L0F; 2L0T; 2L3Z; 2L7R; 2LAS; 2LD9; 2LGD; 2LGY; 2LJ5; 2LVO; 2LVP; 2LVQ; 2LWP; 2LXA; 2LXC; 2LZ6; 2M17; 2M8S; 2MA9; 2MBH; 2MBO; 2MBQ; 2MCN; 2MI8; 2MJ5; 2MJB; 2NR2; 2NVU; 2O6V; 2OJR; 2OOB; 2PE6; 2PE9; 2PEA; 2QHO; 2RPQ; 2RR9; 2RSU; 2RU6; 2UYZ; 2VRR; 2W9N; 2WDT; 2WWZ; 2WX0; 2WX1; 2WYQ; 2XBB; 2XEW; 2XK5; 2Y5B; 2Z59; 2ZCB; 2ZCC; 2ZEQ; 2ZNV; 2ZVN; 2ZVO; 3A1Q; 3A33; 3A4R; 3A4S; 3A9J; 3A9K; 3AI5; 3ALB; 3AUL; 3AXC; 3B08; 3B0A; 3B1L; 3BY4; 3C0R; 3CMM; 3DBH; 3DBL; 3DBR; 3DCG; 3DQV; 3DVG; 3DVN; 3EEC; 3EFU; 3EHV; 3GZN; 3H1U; 3H7P; 3H7S; 3HM3; 3I3T; 3IFW; 3IHP; 3JSV; 3JVZ; 3JW0; 3K9O; 3K9P; 3KVF; 3KW5; 3KYC; 3KYD; 3L0W; 3L10; 3LDZ; 3M3J; 3M62; 3M63; 3MHS; 3MTN; 3N30; 3N32; 3N3K; 3NHE; 3NOB; 3NS8; 3O65; 3OJ3; 3OJ4; 3OLM; 3ONS; 3PGE; 3PHD; 3PHW; 3PHX; 3PLU; 3PLV; 3PRM; 3PSE; 3PT2; 3PTF; 3Q3F; 3QHT; 3R66; 3RD2; 3RT3; 3RUL; 3RZW; 3SDL; 3TBL; 3TIX; 3TMP; 3U30; 3UF8; 3UGB; 3UIN; 3UIO; 3UIP; 3UQA; 3UQB; 3V60; 3V61; 3V62; 3V6C; 3V6E; 3VAW; 3VFK; 3VHT; 3VUW; 3VUX; 3VUY; 3ZDM; 3ZKJ; 3ZLZ; 3ZNG; 3ZNH; 3ZNI; 3ZNZ; 3ZO5; 3ZRC; 3ZRF; 3ZTC; 3ZTD; 3ZUN; 4A20; 4AJY; 4ASW; 4AUQ; 4AWJ; 4B95; 4B9K; 4BBN; 4BKG; 4BKS; 4BKT; 4BOS; 4BOZ; 4BVU; 4DBG; 4DDG; 4DDI; 4DHJ; 4DHZ; 4DWF; 4EEW; 4F8C; 4FBJ; 4FJV; 4FN2; 4G50; 4GGQ; 4GIV; 4GOC; 4HCN; 4HCP; 4HJK; 4HK2; 4HWI; 4HXD; 4I6L; 4I6N; 4IG7; 4II2; 4II3; 4IUM; 4JGH; 4JIO; 4JQW; 4K1R; 4K7S; 4K7U; 4K7W; 4K95; 4KSK; 4KSL; 4LCD; 4LDT; 4LJO; 4LJP; 4M0W; 4MDK; 4N9F; 4NNJ; 4NQK
» More

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