Entry: PS50314

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General information about the entry

Entry name [info] PHE_RICH
Accession [info] PS50314
Entry type [info] MATRIX
Date [info] APR-2002 (CREATED); APR-2002 (DATA UPDATE); APR-2002 (INFO UPDATE).
PROSITE Doc. [info] PDOC50099
Associated ProRule [info] PRU00014

Name and characterization of the entry

Description [info] Phenylalanine-rich region profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=2;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=2;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.9547; R2=0.15064591; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=50; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=36; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: SY_I='F'; I0=-1; M0=-1;
...
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/M: SY='F'; M= -1, -1, -1, -1, -1,  6, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1;
/I:         MI=0; IM=0; I=-1,-1,-1,-1,-1,6,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1;
/M: SY='F'; M= -1, -1, -1, -1, -1,  6, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1;
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Comments [info]

Matrix type [info] composition
Scaling database [info] db_global
Author [info] P_Bucher
Skip flag [info] TRUE
Feature key [info] COMPBIAS
Feature description [info] Phe-rich
Version [info] 2

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