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Entry: PS50320

General information about the entry

Entry name [info] MET_RICH
Accession [info] PS50320
Entry type [info] MATRIX
Date [info] 01-APR-2002 CREATED; 01-APR-2002 DATA UPDATE; 01-APR-2002 INFO UPDATE.
PROSITE Doc. [info] PDOC50099
Associated ProRule [info] PRU00013

Name and characterization of the entry

Description [info] Methionine-rich region profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=2;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=2;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.9474; R2=0.16486089; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=46; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=34; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: SY_I='M'; I0=-1; M0=-1;
...
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/M: SY='M'; M= -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1,  7, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1;
/I:         MI=0; IM=0; I=-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,7,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1;
/M: SY='M'; M= -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1,  7, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1;
» more

Comments [info]

Matrix type [info] composition
Scaling database [info] db_global
Author [info] P_Bucher
Skip flag [info] TRUE
Feature key [info] COMPBIAS
Feature description [info] Met-rich
Version [info] 3

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