PROSITE

/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=14;
/DISJOINT: DEFINITION=PROTECT; N1=2; N2=13;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.7520370; R2=0.0067207; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=856; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=558; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-68; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;

                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-255; BD=-255;
/M: SY='S'; M=  29,  23,-103, -62,-119,-102,  30, -77,-105, -39,-111,  48,-114,-101,-110,  79,  44,-109,-132,-113;
/M: SY='S'; M= -89,-112,-104,-105,-122,   3,-107,-122,-105,-126,-119, -92,-111, -97,-110, 114, -85,-115,-129,-114;
/M: SY='I'; M=-112,-122,-133,-129, -94,-136,-128,  97,-126,  46, -81,-126,-125,-122,-127,-122,-106,  15,-121,-104;
/M: SY='A'; M=  92,-112, -19,   2,-122, -11,-115,-110,-108,-114,-109, -12,-114, -43,-114, -91,  -6,  -3,-126,-118;
/M: SY='S'; M=  49,  -1,  18,   8,-121,-104,-108,-115,  -8, -39,-112,  16, -94, -71,-108,  67,  25, -58,-130,-116;
/M: SY='L'; M=-115,-117,-132,-124,  -9,-134,-116, -80,-126,  98, -76,-131,-132,-119,-123,-125,-111, -87,-117, -99;
/M: SY='R'; M= -33,-130,-111, -99,-123,-123,-100,-130, -72,-122,-111,-104,-123, -88, 123,-108,-113,-123,-123,-110;
/M: SY='M'; M=   2,-120,-122,-111, -79,-123, -33, -14,-101,  53,  93,-115, -94,  25,  58, -91,-109, -96,-121,-103;
/M: SY='K'; M= -55,-126,-105, -91,-126,-118,-104,-127, 105,-125,-113, -97,-113, -87,  64,-105,-106,-122,-121,-112;
/M: SY='A'; M=  94,-110,-114,-108,-119, -98,-115,-111,-110, -12,-107,-107,-114,-105,-114,  46, -97,-101,-124,-116;
/M: SY='K'; M=-110,-126,-102,  24,-123,-118,   4,-123,  77, -25,-110, -11,-114,  33,  71, -11,-107,-120,-123,-111;
/M: SY='E'; M= -99,-129,   7,  89,-130,-120,  44,-127,   4,-120,   7,-100,-109,  85, -67,-103,-109,-124,-127,-112;
/M: SY='H'; M=   9,-126,-108,-106,  13,-119, 136, -84,-109, -28,-101, -99,-121,  -6,-105,-107,-114,-120,-123,  50;
/M: SY='S'; M=  32, -91,-102,  34,-122,-107,   6, -61,   3, -47, -38,  15, -32, -10,-106,  67,  19, -42,-130,-115;
/I:         E1=0; IE=-255; DE=-255;

• UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  
• Total number of hits in UniProtKB/Swiss-Prot: 75 hits in 75 different sequences
  
• Number of hits on proteins that are known to belong to the set under consideration: 75 hits in 75 different sequences
  
• Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  
• Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  
• Number of known missed hits: 0
  
• Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  
• Precision (true hits / (true hits + false positives)): 100.00 %
  
• Recall (true hits / (true hits + false negatives)): 100.00 %
  

• MATRIX_TYPE: protein_domain
  
• Scaling database: UniProtKB/Swiss-Prot: reversed
  
• Matrix author: CJA_Sigrist
  
• Taxonomic range: Eukaryotes
  
• Maximum known number of repetitions of the pattern in a single protein: 1
  
• FT_KEY: MOTIF
  
• FT_DESC: OAR
  
• VERSION: 2
  

ALX1_HUMAN  (Q15699), ALX1_MOUSE  (Q8C8B0), ALX1_RAT    (Q63087), 
ALX1_XENLA  (Q91574), ALX4_BOVIN  (Q4LAL6), ALX4_HUMAN  (Q9H161), 
ALX4_MOUSE  (O35137), AL_DROME    (Q06453), ARX_DANRE   (O42115), 
ARX_HUMAN   (Q96QS3), ARX_MOUSE   (O35085), ARX_RAT     (A6YP92), 
DMBX1_HUMAN (Q8NFW5), DMBX1_MOUSE (Q91ZK4), DMX1A_DANRE (Q8JI10), 
DMX1B_DANRE (Q566X8), DRGX_HUMAN  (A6NNA5), DRGX_MOUSE  (Q8BYH0), 
DRGX_RAT    (Q62798), OTBP_DANRE  (Q6DGH9), OTP_DROME   (P56672), 
OTP_HELER   (Q6SR69), OTP_HELTB   (Q6SR68), OTP_HUMAN   (Q5XKR4), 
OTP_LYTVA   (Q6SZ65), OTP_MOUSE   (O09113), OTP_PARLI   (O76971), 
OTP_SACKO   (Q7YTC2), PITX1_CHICK (P56673), PITX1_HUMAN (P78337), 
PITX1_MOUSE (P70314), PITX1_RAT   (Q99NA7), PITX1_XENLA (Q9W751), 
PITX2_CHICK (O93385), PITX2_DANRE (Q9W5Z2), PITX2_HUMAN (Q99697), 
PITX2_MOUSE (P97474), PITX2_RAT   (Q9R0W1), PITX2_XENLA (Q9PWR3), 
PITX3_DANRE (Q6QU75), PITX3_HUMAN (O75364), PITX3_MOUSE (O35160), 
PITX3_RAT   (P81062), PITX3_XENLA (Q9I8K3), PITX_BRABE  (Q9U637), 
PITX_DROME  (O18400), PRRX1_CHICK (Q05437), PRRX1_HUMAN (P54821), 
PRRX1_MOUSE (P63013), PRRX1_RAT   (P63014), PRRX2_CHICK (Q90963), 
PRRX2_HUMAN (Q99811), PRRX2_MOUSE (Q06348), RX1_ASTFA   (Q9I9D5), 
RX1_CHICK   (Q9PVY0), RX1_DANRE   (O42356), RX2_CHICK   (Q9PVX0), 
RX2_DANRE   (O42357), RX2_ORYLA   (Q9I9A2), RX3_DANRE   (O42358), 
RXA_XENLA   (O42201), RXB_XENLA   (O42567), RX_DROME    (Q9W2Q1), 
RX_HUMAN    (Q9Y2V3), RX_MOUSE    (O35602), RX_RAT      (Q9JLT7), 
SHOX2_HUMAN (O60902), SHOX2_MOUSE (P70390), SHOX2_RAT   (O35750), 
SHOX_HUMAN  (O15266), VSX2_CHICK  (Q9IAL1), VSX2_DANRE  (O42477), 
VSX2_HUMAN  (P58304), VSX2_MOUSE  (Q61412), VSX2_ORYLA  (Q9I9A3)

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment