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	Entry: PS50923

General information about the entry
Entry name	SUSHI
Accession number	PS50923
Entry type	MATRIX
Date	DEC-2003 (CREATED); DEC-2003 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation	PDOC50923
Associated ProRule	PRU00302
Name and characterization of the entry
Description	Sushi/CCP/SCR domain profile.
Matrix / Profile	/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=61; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=61; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2641132; R2=0.0103577; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=476; N_SCORE=7.2; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=312; N_SCORE=5.5; MODE=1; TEXT='R?'; /DEFAULT: M0=-9; D=-50; I=-50; B1=-200; E1=-200; MI=-105; MD=-105; IM=-105; DM=-105; A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: M= -5, -8,-53, -9, -7,-15,-14,-15, -4, -4, -8, -4, -7,-15, -8, -4, -5, -4, 0,-26,-12, -9; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MD=-32; /M: SY='S'; M= -4, -1,-59, 0, 2,-19,-13, -5,-19, 1,-19,-11, 0,-11, 2, -2, 4, 0,-14,-24,-11, 1; D=-15; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MI=-32; MD=-32; IM=-32; /M: SY='C'; M=-10,-20,116,-30,-30,-18,-30,-30,-29,-30,-19,-19,-20,-40,-30,-30,-10,-10,-10,-49,-29,-30; /M: SY='P'; M= -6, -5,-58, -2, 1,-24, -6,-12,-21, -5,-22,-15, -5, 19, -4,-10, 0, -4,-21,-28,-19, -3; /M: SY='P'; M= -5, -5,-56, -3, 4,-17,-18, -8,-15, 0,-16,-10, -5, 5, -1, -5, -3, -6,-15,-24,-11, 0; /M: SY='P'; M= -9,-20,-53,-14, -5,-18,-22,-19, -8,-14,-11,-10,-19, 48,-12,-18,-12, -8,-15,-28,-21,-12; /M: SY='P'; M= -8, -3,-59, -1, 2,-22,-11, -8,-19, -5,-22,-14, -3, 19, -4, -9, -3, -5,-20,-27,-16, -3; /I: I=-6; MD=-13; /M: SY='E'; M= -4, -1,-18, 2, 5,-15,-11, -7,-11, -3,-10, -8, -3, 1, 1, -5, -1, -3,-10,-18,-11, 2; D=-6; /I: I=-6; MI=0; MD=-13; IM=0; DM=-13; /M: SY='I'; M= -8,-22,-23,-22,-15, -4,-26,-19, 12,-17, 7, 5,-20, 1,-16,-17,-15, -7, 8,-20, -8,-17; D=-6; /I: I=-6; DM=-13; /M: SY='E'; M= -7, -1,-26, 1, 12,-20,-17, -6,-16, -1,-15,-11, -3, 6, 2, -5, -3, -6,-17,-24,-14, 6; D=-6; /I: I=-6; DM=-13; /M: SY='N'; M=-10, 15,-22, 6, 0,-13, -8, 17,-18, -2,-20,-11, 26,-18, 0, -1, 1, -5,-22,-28, -6, -1; D=-6; /I: I=-6; DM=-13; /M: SY='G'; M= 7,-10,-22,-12,-15,-20, 34,-18,-24,-15,-19,-13, -4,-15,-15,-17, 2,-10,-16,-20,-22,-15; D=-6; /I: I=-6; DM=-13; /M: SY='R'; M= -8, -5,-23, -6, -3,-10,-16, -4,-12, 0,-11, -6, -4,-15, -1, 2, -4, -2,-10,-16, 0, -3; D=-6; /I: I=-6; DM=-13; /M: SY='I'; M= -7,-19,-21,-21,-14, 1,-24,-12, 8,-13, 5, 5,-16,-15,-11,-11,-12, -6, 7,-16, 0,-14; D=-6; /I: I=-6; DM=-13; /M: M= -5, -4,-21, -7, -2,-14,-17, -7, -7, -1,-10, -4, -1,-11, 0, -2, -1, 0, -6,-22, -8, -2; D=-6; /I: I=-6; DM=-13; /M: M= -4, -6, -4, -8, -7,-11, -9, -9,-10,-11, -8, -7, -3,-10, -7,-11, 0, 0, -8,-22, -9, -8; D=-6; /I: I=-6; DM=-13; /M: SY='S'; M= -3, -2,-14, -3, 1,-12, -6, -1,-14, 0,-13, -8, 1, -4, 0, 0, 4, 0,-11,-18, -8, 0; D=-6; /I: I=-6; DM=-13; /M: M= -3, -7,-14,-10, -8, -8,-12,-10, -3, -7, -5, -3, -5, -8, -7, -7, -3, 0, -3,-18, -6, -9; D=-6; /I: I=-6; DM=-13; /M: SY='K'; M= -5, -4,-25, -3, 2,-20,-11, -5,-18, 4,-17, -9, -2, -8, 2, 1, -1, -5,-15,-23,-10, 1; /M: SY='N'; M= -6, 2,-21, 1, -2,-19, -5, -8,-20, -4,-17,-12, 4, -9, -4, -4, 0, -3,-17,-27,-14, -4; /M: SY='N'; M= -5, -1,-23, -3, -1,-16, -7, -8,-17, -3,-16,-11, 2, -9, -4, -4, 2, 0,-14,-26,-12, -3; /M: SY='Y'; M=-16,-20,-25,-23,-19, 31,-26, 2, -2,-16, 3, 0,-16,-25,-17,-12,-16, -7, -6, 9, 40,-19; /M: M= -5, -7,-23, -7, -2,-14,-18,-10, -9, -5,-10, -6, -6, -5, -3, -6, -2, -1, -7,-25, -9, -3; /M: SY='Y'; M= -9,-13,-25,-13, -6, 2,-23, -3, -3,-12, -3, -3,-12,-14, -9,-12,-10, -8, -4,-13, 7, -9; /I: I=-15; MD=-32; /M: SY='G'; M= -5, -2,-27, -4,-10,-25, 35,-10,-31, -7,-26,-16, 5,-16,-10, -6, -1,-14,-25,-20,-21,-11; D=-15; /I: I=-15; MI=-32; IM=-32; DM=-32; /M: SY='D'; M= -3, 10,-21, 12, 10,-24,-12, 0,-23, -2,-20,-15, 5,-10, 5, -6, 10, 6,-17,-31,-13, 7; /M: SY='T'; M= -5, -6,-20, -9, -2,-14,-19, -9, -9, 0, -9, -4, -3,-15, 0, 1, 1, 6, -5,-25, -8, -2; /M: SY='V'; M= -3,-27, 0,-32,-27, 0,-31,-28, 22,-25, 13, 9,-25,-28,-25,-24,-14, -5, 27,-27, -8,-27; /M: SY='R'; M= -7, 1,-21, 0, 4,-17,-17, 1,-17, 1,-16,-10, 3,-14, 3, 6, 4, 5,-13,-28, -9, 2; /M: SY='Y'; M=-16,-24,-23,-27,-24, 37,-30, 0, 5,-18, 5, 2,-20,-29,-21,-15,-18, -8, 0, 12, 48,-24; /M: SY='S'; M= -3, -3,-20, -4, 3,-18,-15, -6,-15, 0,-16, -9, 0,-13, 4, 1, 8, 6,-10,-27,-10, 3; /M: SY='C'; M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30; /M: SY='E'; M= -9, 6,-26, 6, 8,-22,-15, 0,-22, 7,-18,-12, 7,-10, 6, 8, -2, -6,-20,-26,-11, 6; /M: SY='E'; M= -7, 2,-29, 6, 14,-28,-12, -5,-24, 1,-24,-16, 0, 14, 5, -5, 1, -5,-24,-28,-19, 8; /M: SY='G'; M= -3, -7,-29, -6,-14,-24, 45,-15,-34,-14,-27,-18, 1,-15,-15,-15, -1,-16,-27,-20,-22,-14; /I: I=-14; MI=0; MD=-29; IM=0; DM=-29; /M: SY='Y'; M=-18,-23,-26,-26,-22, 42,-27, 5, -1,-17, 3, 0,-18,-29,-19,-13,-18,-10, -7, 18, 52,-22; /M: SY='R'; M= -8, -9,-24, -9, 0,-13,-20, -3,-11, 4,-10, -3, -8,-15, 3, 7, -6, -4, -8,-18, -2, 0; /M: SY='L'; M= -7,-23,-21,-26,-17, 0,-25,-17, 13,-19, 25, 15,-21,-21,-13,-14,-18, -6, 8,-21, -4,-16; /I: I=-8; MD=-17; /M: SY='Q'; M= -6, -6,-22, -8, -2,-15,-19, -4, -8, -1, -9, -3, -4,-13, 1, 1, -3, -2, -6,-24, -7, -2; D=-8; /I: I=-8; MI=0; MD=-17; IM=0; DM=-17; /M: SY='G'; M= -2, -5,-27, -4, -9,-26, 40,-13,-32,-13,-25,-17, 0,-11,-12,-13, 0,-13,-25,-21,-24,-11; D=-8; /I: I=-8; DM=-17; /M: SY='S'; M= -1, 0,-22, 2, 4,-21,-10, -7,-17, -5,-20,-13, 1, 3, 0, -8, 8, 1,-15,-30,-16, 1; D=-8; /I: I=-8; DM=-17; /M: SY='S'; M= 0, 0,-23, -2, 0,-18, -4, -8,-19, -3,-19,-12, 2, -7, -2, -5, 3, -3,-16,-23,-14, -1; D=-8; /I: I=-8; DM=-17; /M: SY='T'; M= -3, -6,-19, -9, -4,-11,-19, -9, -6, -6, -9, -6, -4,-15, -3, -6, 3, 7, -3,-23, -5, -4; D=-8; /I: I=-8; DM=-17; /M: SY='I'; M= -3,-19,-21,-24,-17, -1,-24,-15, 12,-15, 8, 7,-15,-20,-11,-12, -9, -2, 9,-17, 2,-16; /M: SY='T'; M= -6, -8,-20,-11, -4,-12,-22, -9, -7, -3, -7, -3, -7,-16, 0, -1, 0, 10, -3,-22, -5, -3; /M: SY='C'; M=-10,-21,112,-30,-29,-18,-30,-29,-27,-30,-16,-18,-21,-39,-29,-29,-11,-10, -9,-48,-28,-29; /M: SY='Q'; M= -7, -5,-22, -8, -4,-15,-17, -8, -6, -6, -4, -1, -3,-16, 2, -4, -3, 1, -7,-24, -8, -2; /I: I=-13; MD=-27; /M: SY='S'; M= 0, 0,-17, 1, 3,-16, -6, -8,-13, -2,-13, -9, 0, -2, -1, -5, 4, -1,-11,-21,-13, 1; D=-13; /I: I=-13; MI=0; MD=-27; IM=0; DM=-27; /M: SY='N'; M= -8, 17,-23, 16, 9,-24, -6, 4,-24, -1,-23,-16, 19,-13, 3, -4, 6, -1,-23,-33,-15, 5; /M: SY='G'; M= -2, -5,-26, -6,-11,-24, 32,-14,-28,-11,-23,-15, 1,-16,-12,-13, 1,-11,-21,-24,-22,-12; /M: SY='Q'; M= -5, -4,-23, -6, -1,-21, -9, -5,-15, 0,-16, -7, -1,-13, 5, 1, 2, 1,-12,-25,-12, 1; /M: SY='W'; M=-20,-40,-50,-40,-30, 0,-20,-30,-20,-20,-20,-20,-40,-30,-20,-20,-40,-30,-30,150, 0,-20; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MD=-21; /M: SY='S'; M= -1, 3,-56, 0, -2,-15,-11, -8,-15, -7,-19,-13, 7,-12, -3, -7, 17, 15, -9,-32,-13, -3; D=-10; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MD=-21; /M: SY='P'; M= -2, 0,-58, -2, -3,-15, 2, -8,-15, -5,-17,-11, 4, 5, -5, -6, 2, -2,-14,-20,-14, -5; D=-10; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MI=0; MD=-21; IM=0; DM=-21; /M: SY='P'; M= -2, -5,-55, -5, 2,-21,-13, -9,-18, 1,-19,-11, -4, 6, -1, -3, 1, -1,-15,-25,-15, 0; /M: M= -7,-14,-55,-14, -3,-11,-23,-15, -2, -7, 0, -1,-13, -2, -7, -9,-10, -4, -4,-23,-11, -6; /M: SY='P'; M= -7,-16,-52,-10, -2,-25,-19,-17,-15, -9,-21,-14,-15, 53, -9,-15, -8, -7,-20,-29,-24, -9; /M: SY='T'; M= -5, -8,-52,-10, 0,-13,-20,-10,-10, 1,-10, -5, -6,-14, 0, 1, -1, 2, -5,-23, -9, -1; /M: SY='C'; M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30; /M: SY='E'; M= -9, -4,-56, -4, 11,-20,-22, -6,-12, 9,-13, -6, -4,-13, 7, 8, -5, -6,-10,-24,-10, 8; /M: SY='K'; M= 3, -5,-53, -5, 2,-20,-13,-12,-15, 4,-15, -9, -6, -6, -1, -1, -1, -5,-10,-25,-14, 0; /I: E1=0; IE=-105; DE=-105;
Numerical results
UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052. Total number of hits in UniProtKB/Swiss-Prot: 985 hits in 233 different sequences Number of hits on proteins that are known to belong to the set under consideration: 985 hits in 233 different sequences Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences Number of false hits (on unrelated proteins): 0 hits in 0 different sequences Number of known missed hits: 5 Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0 Precision (true hits / (true hits + false positives)): 100.00 % Recall (true hits / (true hits + false negatives)): 99.49 %
Comments
MATRIX_TYPE: protein_domain Scaling database: UniProtKB/Swiss-Prot: reversed Matrix author: N_Hulo Taxonomic range: Eukaryotes, Eukaryotic viruses Maximum known number of repetitions of the pattern in a single protein: 34 FT_KEY: DOMAIN FT_DESC: Sushi VERSION: 1
Cross-references
UniProtKB/Swiss-Prot	True positive hits: APOH_BOVIN (P17690), APOH_CANFA (P33703), APOH_HUMAN (P02749), APOH_MOUSE (Q01339), APOH_PANTR (Q95LB0), APOH_RAT (P26644), APOR_PIG (Q03472), B5_VACCC (P21115), B5_VACCW (Q01227), C1RA_MOUSE (Q8CG16), C1RB_MOUSE (Q8CFG9), C1R_HUMAN (P00736), C1R_MACFA (Q4R577), C1R_PANTR (Q5R1W3), C1R_PONAB (Q5R544), C1S_BOVIN (Q0VCX1), C1S_HUMAN (P09871), C1S_PIG (Q69DK8), C1S_RAT (Q6P6T1), C4BPA_BOVIN (Q28065), C4BPA_HUMAN (P04003), C4BPA_MOUSE (P08607), C4BPA_RAT (Q63514), C4BPB_BOVIN (Q28066), C4BPB_HUMAN (P20851), C4BPB_RAT (Q63515), CASP_MESAU (P15156), CCPH_SHV21 (Q01016), CFAB_BOVIN (P81187), CFAB_GORGO (Q864V9), CFAB_HUMAN (P00751), CFAB_MOUSE (P04186), CFAB_PANTR (Q864W0), CFAB_PIG (Q03710), CFAB_PONPY (Q864W1), CFAH_BOVIN (Q28085), CFAH_HUMAN (P08603), CFAH_MOUSE (P06909), CFBL_CHICK (P81475), CO2_BOVIN (Q3SYW2), CO2_GORGO (Q863A0), CO2_HUMAN (P06681), CO2_MOUSE (P21180), CO2_PANTR (Q8SQ74), CO2_PONPY (Q8SQ75), CO6_BOVIN (Q29RU4), CO6_HUMAN (P13671), CO6_PANTR (P61134), CO6_PONPY (P61135), CO6_RAT (Q811M5), CO7_BOVIN (Q29RQ1), CO7_HUMAN (P10643), CO7_PIG (Q9TUQ3), CO7_PONAB (Q5RAD0), CR1L_HUMAN (Q2VPA4), CR1L_MOUSE (Q64735), CR1L_RAT (Q63135), CR1_HUMAN (P17927), CR2_HUMAN (P20023), CR2_MOUSE (P19070), CS1A_MOUSE (Q8CG14), CS1B_MOUSE (Q8CFG8), CSMD1_HUMAN (Q96PZ7), CSMD1_MOUSE (Q923L3), CSMD2_HUMAN (Q7Z408), CSMD3_HUMAN (Q7Z407), CSMD3_MOUSE (Q80T79), CSPG2_BOVIN (P81282), CSPG2_CHICK (Q90953), CSPG2_HUMAN (P13611), CSPG2_MOUSE (Q62059), CSPG2_RAT (Q9ERB4), CTX_SEPES (B2DCR8), DAF1_MOUSE (Q61475), DAF2_MOUSE (Q61476), DAF_CAVPO (Q60401), DAF_HUMAN (P08174), DAF_PONPY (P49457), F13B_HUMAN (P05160), F13B_MOUSE (Q07968), FBLN7_HUMAN (Q53RD9), FBLN7_MOUSE (Q501P1), FHR1_HUMAN (Q03591), FHR2_HUMAN (P36980), FHR3_HUMAN (Q02985), FHR4_HUMAN (Q92496), FHR5_HUMAN (Q9BXR6), GABR1_HUMAN (Q9UBS5), GABR1_MOUSE (Q9WV18), GABR1_RAT (Q9Z0U4), HIG_DROME (Q09101), HPT_ATEGE (P50417), HPT_BOVIN (Q2TBU0), HPT_CANFA (P19006), HPT_CAPIB (B6E141), HPT_CEREL (B6D985), HPT_HUMAN (P00738), HPT_MESAU (O35086), HPT_MOUSE (Q61646), HPT_MUSCR (Q60574), HPT_MUSSA (Q62558), HPT_PAPHA (Q5VAN1), HPT_PIG (Q8SPS7), HPT_PONAB (Q5R5F6), HPT_RABIT (P19007), HPT_RAT (P06866), I15RA_HUMAN (Q13261), I15RA_MOUSE (Q60819), IL2RA_BOVIN (P12342), IL2RA_CANFA (O62802), IL2RA_FELCA (P41690), IL2RA_HUMAN (P01589), IL2RA_MACMU (Q5MNY4), IL2RA_MOUSE (P01590), IL2RA_PANTR (Q38IC8), IL2RA_PIG (O02733), IL2RA_RAT (P26897), IL2RA_SHEEP (P26898), K0247_HUMAN (Q92537), LFC_CARRO (Q26422), LFC_TACTR (P28175), LYAM1_BOVIN (P98131), LYAM1_HUMAN (P14151), LYAM1_MACMU (Q95198), LYAM1_MOUSE (P18337), LYAM1_PANTR (Q95237), LYAM1_PAPHA (Q28768), LYAM1_PONPY (Q95235), LYAM1_RAT (P30836), LYAM2_BOVIN (P98107), LYAM2_CANFA (P33730), LYAM2_HORSE (Q95LG1), LYAM2_HUMAN (P16581), LYAM2_MOUSE (Q00690), LYAM2_PIG (P98110), LYAM2_RABIT (P27113), LYAM2_RAT (P98105), LYAM3_BOVIN (P42201), LYAM3_HUMAN (P16109), LYAM3_MOUSE (Q01102), LYAM3_RAT (P98106), LYAM3_SHEEP (P98109), MASP1_HUMAN (P48740), MASP1_MOUSE (P98064), MASP1_RAT (Q8CHN8), MASP2_HUMAN (O00187), MASP2_MOUSE (Q91WP0), MASP2_RAT (Q9JJS8), MCP_BOVIN (Q6VE48), MCP_CALJA (Q8HYX8), MCP_CAVPO (P70105), MCP_CHLAE (P79138), MCP_HUMAN (P15529), MCP_MOUSE (O88174), MCP_PIG (O02839), MCP_PONAB (Q5R4D0), MCP_RAT (Q9Z0M4), MCP_SAGMY (O19124), MCP_SAGOE (O62837), MCP_SAISC (O62685), NCAN_HUMAN (O14594), NCAN_MOUSE (P55066), NCAN_PANTR (Q5IS41), NCAN_RAT (P55067), PAMR1_BOVIN (Q5E9P5), PAMR1_HUMAN (Q6UXH9), PAMR1_MOUSE (Q8BU25), PAMR1_PONAB (Q5RDI1), PAMR1_XENTR (Q6DIV5), PAPP1_HUMAN (Q13219), PAPP1_MOUSE (Q8R4K8), PAPP2_HUMAN (Q9BXP8), PERT_CANFA (Q8HYB7), PERT_HUMAN (P07202), PERT_MOUSE (P35419), PERT_PIG (P09933), PERT_RAT (P14650), PGCA_BOVIN (P13608), PGCA_CANFA (Q28343), PGCA_CHICK (P07898), PGCA_HUMAN (P16112), PGCA_MOUSE (Q61282), PGCA_RAT (P07897), PGCB_BOVIN (Q28062), PGCB_HUMAN (Q96GW7), PGCB_MOUSE (Q61361), PGCB_RAT (P55068), SE6L1_HUMAN (Q9BYH1), SE6L1_MOUSE (Q6P1D5), SE6L2_BOVIN (Q29RN8), SE6L2_HUMAN (Q6UXD5), SE6L2_MOUSE (Q4V9Z5), SEZ6_BOVIN (A0JNA2), SEZ6_HUMAN (Q53EL9), SEZ6_MOUSE (Q7TSK2), SEZ6_XENLA (Q6AX42), SNED1_HUMAN (Q8TER0), SNED1_MOUSE (Q70E20), SNED1_RAT (Q5ZQU0), SRCR1_ASTPE (F7J220), SRPX2_BOVIN (Q5EA25), SRPX2_HUMAN (O60687), SRPX2_MOUSE (Q8R054), SRPX2_XENLA (Q6GP28), SRPX_HUMAN (P78539), SRPX_MOUSE (Q9R0M3), SRPX_RAT (Q63769), SUSD1_HUMAN (Q6UWL2), SUSD2_HUMAN (Q9UGT4), SUSD2_MOUSE (Q9DBX3), SUSD3_HUMAN (Q96L08), SUSD3_MOUSE (Q9D176), SUSD4_HUMAN (Q5VX71), SUSD4_MOUSE (Q8BH32), SUSD4_PONAB (Q5R8M2), SUSD5_HUMAN (O60279), SVEP1_HUMAN (Q4LDE5), SVEP1_MOUSE (A2AVA0), SVEP1_RAT (P0C6B8), VB05_VACC0 (P24084), VB05_VACC8 (P24284), VB05_VACCA (O57254), VB05_VACCL (P24083), VB05_VACCT (Q9JF44), VCP_VACCC (P68639), VCP_VACCW (P68638), VGE3_EHV2 (Q66608), Y1004_DROME (Q0KHY3), YMS5_CAEEL (P34501), YQU3_CAEEL (Q09550), ZP3R_CAVPO (O08569), ZP3R_MOUSE (Q60736), ZP3R_RAT (Q7TSY4) False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): CD248_HUMAN (Q9HCU0), CD248_MOUSE (Q91V98), DIG1_CAEEL (Q09165), HPTR_HUMAN (P00739), HPTR_PANTR (Q28801) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
PDB [Detailed view]	1C1Z; 1CKL; 1E5G; 1ELV; 1FHC; 1G40; 1G44; 1GHQ; 1GKG; 1GKN; 1GOP; 1GPZ; 1H03; 1H04; 1H2P; 1H2Q; 1HAQ; 1HCC; 1HFH; 1HFI; 1HR4; 1KOV; 1LY2; 1M11; 1MD7; 1MD8; 1NTJ; 1NTL; 1NWV; 1OJV; 1OJW; 1OJY; 1OK1; 1OK2; 1OK3; 1OK9; 1PPQ; 1Q3X; 1QUB; 1RID; 1SRZ; 1SS2; 1UOT; 1UPN; 1VVC; 1VVD; 1VVE; 1W2R; 1W2S; 1Y8E; 1Z92; 1ZJK; 2A55; 2B5I; 2BZM; 2C8I; 2EHF; 2ERJ; 2ERS; 2G7I; 2GSX; 2IC4; 2JGW; 2JGX; 2KMS; 2O39; 2OK5; 2PSM; 2Q7Z; 2QFG; 2QFH; 2QY0; 2QZD; 2QZF; 2QZH; 2RLP; 2RLQ; 2UWN; 2V8E; 2W80; 2W81; 2WII; 2XQW; 2XRB; 2XRD; 2XWB; 2XWJ; 2YBY; 2YRA; 2Z3Q; 2Z3R; 3ERB; 3GAU; 3GAV; 3GAW; 3GOV; 3HRZ; 3HS0; 3INB; 3IU3; 3IYP; 3J24; 3KXV; 3KZJ; 3L89; 3NFP; 3O8E; 3OED; 3OXU; 3R62; 3RJ3; 3SW0; 3T5O; 3TVJ; 3ZD1; 3ZD2; 4A5W; 4AQB; 4AYD; 4AYE; 4AYI; 4AYM; 4B2R; 4B2S; 4DJZ; 4E0S; 4F4O; 4FXG; 4GS7; 4IGD;

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