Entry: PS50931

Forthcoming changes to the profile format
General information about the entry

Entry name [info] HTH_LYSR
Accession [info] PS50931
Entry type [info] MATRIX
Date [info] OCT-2003 (CREATED); OCT-2013 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00043
Associated ProRule [info] PRU00253

Name and characterization of the entry

Description [info] LysR-type HTH domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=58;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=58;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.7633278; R2=0.0002840; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=267077.49407; R2=19.89878; TEXT='HScore';
/CUT_OFF: LEVEL=0; SCORE=21961; N_SCORE=9.0; H_SCORE=633991; MODE=1;  TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=13158; N_SCORE=6.5; H_SCORE=528886; MODE=1; TEXT='?';
/DEFAULT: B1=*; E1=*; MM=*; II=*;
...
                A     C     D     E     F     G     H     I     K     L     M     N     P     Q     R     S     T     V     W     Y
/I:         B1=-8455; E0=*; BM=-16; BD=-6539;
/M: SY='M'; M=-3996,-3833, -735,-1625, -242,-5537,-1036, 1265,-5253,  827, 3811,-1947, 1077,-1909,-2208,-4619,-1284,   -6,  733,-1441; M0=-1664;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='D'; M=-3712,-5185, 2215,  844,-5506,-1629,-3344,-1246,  740, -564,-4274, 1476, -174,-1316, -261, -447, 1026,-2299,-5368,-1508; M0=-1036;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='L'; M=-1484,-3826,-6340,-1558, 1274,-5546,-4417,  877,-5300, 2247,  -89,-1852, -486,-1845,-5102, -365,  -89, -776,  966,  518; M0=-1594;
/I:         MM=-37; MI=-11690; MD=-5326; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R'; M= -226,-5151,  371,  -97,-5472,-2435,   22,-2186,  959,-5167,-4240, 1851,-1991,  519, 2514, -658,  -76,-4773,-5334,-1582; M0=-1476;
/I:         MM=-1; MI=-11654; MD=-12696; IM=-894; II=-1115; DM=-2055; DD=-397;
/M: SY='H'; M= -197, -660, 1143,-1042,-5409,-1541, 2877,-2331, -448,  588,-4202,-3307,-4757, 2476, -528, -393,-3622,-1527, 1357,-1395; M0=-1173;
/I:         MM=-1; MI=-11654; MD=-12696; IM=-894; II=-1115; DM=-235; DD=-2732;
/M: SY='L'; M=-2448, -533,-8446,-7824,  145,-7853,-6641,  521,-7495, 2975, 1494,-7523,-7489,-6727,-7162,-7019,-5982,-1509,  766,-5845; M0=-4396;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R'; M= -996,-5182,-1794,  731,-5501,-4687,  921,-1335, 1478,-2841,  731, -972,-4780,  877, 2327, -612,-1332,  587,-5366,   -6; M0=-1248;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='Y'; M= 1456, -657,-1544,-5703,-3780,-5546,-4417, 1452,-5299,  -23,   42,-1803,-5596,-4923,-2067,-1653, 1446, 1388,-4284, 1738; M0=-1815;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='F'; M=-2680,-5249,-7892,-7302, 3966,-7235,-5928, -635,-6948, 1288,-3446,-6859,-2109,-6356,-6683,-6371,-5476, -494,-5402, -490; M0=-3954;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='V'; M= -188,  806,  547,   86,-4769,-4886,  877,  886, -370,  331,    6, -622,-4971, -705, -579,-1400,-3728, 2091, -137,-1324; M0=-970;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='A'; M= 2393,  235,-1860,  741,-5334,-4722,    0,-1370,  714,-1429, -806,-3380,-1993, -154,-1373,-1482,  764,  -17, -363,-4633; M0=-1142;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='V'; M=   14,-5384,-8527,-8164,-1604,-8293,-8014, 1477,-8077, 1619,-4563,-7948,-8036,-7903,-8150,-7623,-2392, 2792,-7413,-7004; M0=-4540;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='A'; M= 2312,  258,-2278, -861,-3898,-2610,  599, -635,-2227, -294, 1819,-1238,-5477,-4491,-4785,  103,-3904, 1260,-4372,  410; M0=-1404;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='E'; M= -914,-5185,  957, 2378,-5506,-2366, -912,-5257, 1170,-2897,-4274,-1648,-4779,  817, 1824,-1206, -478,-2479,-5368,-4686; M0=-1643;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='H'; M= -298,  387,-1935, 1595, -971,-2401, 2154,-2314,  -84, -149,-4267, -412,-4781,  429, -135,  287, 1431,-1580,-5362, -326; M0=-747;
/I:         MM=-81; MI=-4198; MD=-12732; IM=-37; II=-5305; DM=-701; DD=-1378;
/M: SY='G'; M=-1535,-5184,-3566, -654, -921, 2724,  334,-5252,  425, -225,-4274,  258,-4784,  430, 1251,-2204,-3655,-4805,-5368,-1519; M0=-1616;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='S'; M=-4288,-5737,-3867,-1932,-6091,-1665, 1557,-5820,-1455,-5733,-4841, 2240,-5265,-1509,-1926, 3019, -763,-5382,-5866,-5221; M0=-2881;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='F'; M=-1635,-3836,-6356,-5720, 3484,-5558,-4430, 1228,-5315,  517, 1014,-5205,-2060,-1556,-5115,-4643,-2048,  874,-4294,  113; M0=-2508;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='T'; M=  202,-5177,-3563, -615,-5494,  154,  -50,-1320, -652,-2840,-4267,   63,-4781,-1403,  343, 1708, 2409,-2297,-5362,-1486; M0=-1270;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R'; M= 1563,-5180,-3562,  304,-5499, -631, -129,-1381, 1230,-1533,-4270, -321,-4780,  397, 2395,-1150,-3652,-1360,-5365,-1541; M0=-1269;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='A'; M= 3453,-5291,-8103,-8454,-8029,-1497,-7372,-7853,-8062,-8117,-7138,-6428,-2058,-7479,-7647,-2563,  270, -256,-8252,-8247; M0=-4886;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='A'; M= 3521,-5293,-8085,-8438,-8038, -782,-7373,-7865,-8061,-8127,-7145,-6426,-6396,-7477,-7648,  111,-2103,-6520,-8258,-8254; M0=-5398;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='E'; M=  471,-5185, -351, 2188,-5506,-4686,  431,-2375, 1066,-2038,-4274,-1648,-4779, 1557, 1502, -948,-1104,-1200,-5368,-4685; M0=-1430;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='M'; M=  823, -696,-1813,  967, -441,-2445,  264,-1451,  922, -574, 1447, -886,-4783,  464, 1323,  372, -233, -898,-5357,-4679; M0=-663;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='L'; M=-2253, -669,-6332,-1374, -730,-5545, -958, -263,-5295, 2902, 1239,-1949,-5595,-1844,-2083,-2498,-3939, -250,-4284,-3942; M0=-2213;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='H'; M=-1551,  304, -255,-1138,  359, 1726, 2791,-5252,-1572,-2896,-1070, 1762,-2026, -625,-1688, -675,-1207,-4803,-5366, 1944; M0=-1261;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='M'; M=-4002,  362,-6347,-5711,-3782,-5550,-4421, 1747,-2386, 1681, 2472,-5195,-5599, -970, -189,-4634,  -75, 1514,-4286, -520; M0=-2324;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='S'; M= -454,-5170,-1674,-1734,-5482,-4695,-3356,-5226,-1578,-5183,-1148,-1666,  290,-2899,-1867, 2633, 2315, -650,-5359,-4682; M0=-2055;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='Q'; M=-1481,-5185, -959,-1729,-5505,-1540,  -73,-2385, -714,-5200,-4274,-3322, 1733, 3849, -877,-1993,-2009,-1585,-5368,-4686; M0=-1993;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='P'; M=  257,-5293,-8012,-8341,-8016,-1556,-7341,-7839,-8002,-8100,-7123,-6409, 3227, -844,-7617, 2332,-1185,-2263,-8237,-8222; M0=-4442;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='A'; M= 2680,-3942,-6228,-5625, -860,-1071,-4500,-3488,-5266,-2554,  625,  -62, -102,-4925,-5138,  123, 1802,-1276,-4442,-4096; M0=-2125;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='V'; M= -627,-5722,-8832,-8411, -147,-8604,-7989, 1807,-8293, 1380,  749,-8273,-8140,-7725,-8169,-7942,-6190, 2722,-6978,-6880; M0=-4729;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='S'; M=-1077,-5340,-7223,-7430,-7973,-1426,  116,-7790,-7325,-8014,-7057,-1748,-6377,-6983,-1964, 3296, 1620,-6514,-8147,-8047; M0=-4471;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R'; M= -195,-5120,-3595,-1908, -983,-1071, 1164,-2055, 1588,-1541,  830, -461,-4797, 1630, 2419,-1284,-1223,-2298,-5322,  397; M0=-1082;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='Q'; M= 1002,-4758,-3860,-1944,-4913,-1668, 2355,-1360,-1904,-1496,  -96,-3573,-4923, 2425, 2028, -122, -153,-2170, -331, -341; M0=-1304;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='I'; M=-6480,-5915,-9090,-8688,-5210,-8980,-8421, 3029,-8621, 1626, 1115,-8661,-8345,-7905,-8457,-8395,-6422, 1549,-7088,-7102; M0=-5546;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R'; M= 1476,-5186,-1841,-3012,-5508, -840,  591,-5258, 1698,-5202, -229, -893,-4780, 1616, 1828,  582, -718,-4808,-5369,-4687; M0=-1872;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R'; M= 1187,-5184,  348,   75,-1755,-2461, -912,-2355,  -61,-1534, -199,  522,-4779, 1847, 2151,-1500,  -23,-2171,-5368,-4685; M0=-1017;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='L'; M=-7411,-6732,-9767,-9160,  171,-9658,-8133,  434,-8982, 3157,  600,-9398,-8453,-7557,-8361,-9103,-7216,-5072,-1076,-6744; M0=-6017;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='E'; M=-6820,-7489,-5942, 3777,-8437,-6928,-5184,-7815,-2194,-7406,-6798,-5657,-7066,-4793, 1154,-6622,-6541,-7576,-7154,-7091; M0=-5487;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='E'; M= -112,-5185,  939, 1853,-5506, -531, -876,-2927, 1042,-5201,-4274,  297,-4779, 1845,  644, -535,  141,-2595,-5368,-4685; M0=-1434;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='Q'; M=   28, -781, 1213, 1572,-5479,-1000,  531,-1381, -189, -934, -520,-3329,-4784, 1729,  190,   63,-1261,-1594,  794,  827; M0=-760;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='L'; M=-1487,-3846,-6366,-2397, 2229,-5569,-4440,  641,-5325, 2546, -818,-5215,-5617,-4946,-5125,-4654,-1303,  -59, -117,-1246; M0=-2550;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='G'; M= -766,-5592,  867,-1955,-5904, 3053, -951,-5665, -430,-5604,-4692, 1216,-5090,  748,-2487,-1458,-4035,-5211,-5772,-5065; M0=-2473;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='V'; M= -502, 1970, 1151,-1238,-4576,-1063,-3676,  975,-1169, -324,-3654,-3804,-5047,  120, -516,-2252,  534, 2152,-4843,-1278; M0=-1029;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='Q'; M= -250,-5185,   48,  436,-5506,-4686,-3344,-5257,  927,-2113,-1161, -887, 1806, 1846, 1402,-1103,  231,    8,-5368,-4685; M0=-1256;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='L'; M=-7323,-6659,-9715,-9125,-4657,-9607,-8193, -298,-8959, 3289, -820,-9351,-8447,-7581,-8371,-9052,-7145,-1346,-6543,-6827; M0=-6080;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='F'; M=-2749,-6152,-9009,-8412, 3891,-8578,-7289, -496,-8142, 1494, -967,-8258,-7958,-7164,-7733,-7820,-6509, -259,-6209,-1282; M0=-4837;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='E'; M=-1107,-5053,  850, 1474,-1885,-4726,  986,  909,-1034,-1475,-1163,  292,-4818,  209, -903,-1472,  624, 1355, -341,  109; M0=-829;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R'; M=-1906,-6192,-6771,-5495,-6617,-6555, -720,-2148, -582,-6055, -913,-5371,-2044,-4259, 4052,-2370,-5537,-2399,-6179,-5991; M0=-3657;
/I:         MM=-16; MI=-11690; MD=-6514; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='T'; M= -651,-5170,  469, -443,-5491, -850,  889,-2242,  537,-2146,-4259,-1140,-1974,  428,  288, 1086, 2206, -260,-5353,-1705; M0=-850;
/I:         MM=-14; MI=-11674; MD=-6692; IM=-894; II=-1115; DM=-376; DD=-2124;
/M: SY='G'; M=-1590,-5172, -472,-1647,-5494, 2045,  984,-5244,-1109,-5189,-4262,  534,  170,  -91, 1046,  495, 1620,-2335,-5356,-4673; M0=-1508;
/I:         MM=-1; MI=-11676; MD=-12718; IM=-894; II=-1115; DM=-399; DD=-2048;
/M: SY='R'; M=-1404,-5185,-1934,-1120,-1985,  -54, 1183,-5257, 1105,-5201,-4274,  563,-1094,  132, 3168,-1432, -446,-4807,-5368,-4686; M0=-1767;
/I:         MM=-62; MI=-5621; MD=-5530; IM=-93; II=-3998; DM=-701; DD=-1378;
/M: SY='G'; M=-1462,-5157,-1924, -630,-5478, 2286, 1739,-5228,  260,-5173,-4246,  364, -617,  557, 1790, -139, -660,-4779,-5340,-4657; M0=-1710;
/I:         MM=-1; MI=-11658; MD=-12701; IM=-894; II=-1115; DM=-258; DD=-2610;
/M: SY='M'; M= -799,  285,-6344,-5708,-1632,-2480,-4418, 1337,-2346, 1777, 1968,-5192,-2021, -738,-1435,-2463,-1834, 1882,   56,-3941; M0=-1663;
/I:         MM=-17; MI=-11690; MD=-6429; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R'; M= -724,  301,-1805,  790,-1961,-1876,  -28, -252,  251, -781, 1128,-2168,-4780,  915, 1384, -126, 1329,  634,-5309,-4643; M0=-682;
/I:         MM=-1; MI=-11673; MD=-12715; IM=-894; II=-1115; DM=-366; DD=-2160;
/M: SY='L'; M= -354,-3835,-6354,-5718,  810,-1073,-4428,-1195,-5313, 2315, -887,-5203, 2314,-1819,-5113,-4642,-1699, -414,-4293,-3951; M0=-2218;
/I:         MM=-1; MI=-11690; MD=-12732; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='T'; M=-4623,-5017,-2077,-6185,-5932,-5601,-5908,-5470,-6466,-1372,-1089, -427,-6200,-6044,-6476,  -66, 3829,-2412,-6373,-6045; M0=-3662;
/I:         B0=*; E1=-1000;
» More

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 420 in 419 different sequences
Number of true positive hits 420 in 419 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 0
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] PS_Langendijk_Genevaux
Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Feature key [info] DOMAIN
Feature description [info] HTH lysR-type
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
419 sequences

AAER_ECO57  (P67664), AAER_ECOL6  (P67663), AAER_ECOLI  (P67662), 
ABGR_ECOLI  (P77744), ALLS_ECO57  (P0ACR1), ALLS_ECOK1  (A1A8H0), 
ALLS_ECOL5  (Q0TKD7), ALLS_ECOL6  (Q8FK66), ALLS_ECOLI  (P0ACR0), 
ALLS_ECOUT  (Q1RF30), ALLS_KLEPN  (Q765S2), ALLS_SALCH  (Q57S50), 
ALLS_SALPA  (Q5PCH2), ALLS_SALTI  (Q8Z8R3), ALLS_SALTY  (Q9S4Y7), 
ALSR_BACSU  (Q04778), AMPR_CITFR  (P12529), AMPR_CITKO  (P52658), 
AMPR_ENTCL  (P05051), AMPR_PROST  (O69772), AMPR_PSEAE  (P24734), 
AMPR_RHOCA  (P14145), AMPR_YEREN  (P45461), ARAB_STRAT  (P52659), 
BBUR_BORBR  (O06703), BENM_ACIAD  (O68014), BLAA_PROVU  (P52660), 
BLAA_STRCI  (P33651), BSDA_BACSU  (P94403), BUDR_ENTAE  (P52665), 
BUDR_RAOTE  (P52666), CATM_ACIAD  (P07774), CATR_ACILW  (O33945), 
CATR_PSEPU  (P20667), CBBR_RHIME  (P58332), CBBR_RHORU  (P52595), 
CBBR_RHOSH  (P52690), CBBR_SINMW  (P56885), CBBR_XANFL  (P25545), 
CBL_ECOLI   (Q47083), CBL_ENTAE   (Q08598), CFXR_CUPNH  (P42722), 
CITR_BACSU  (P39127), CLCR_PSEPU  (Q05840), CMPR_SYNE7  (Q9F1R2), 
CMPR_SYNP6  (Q5N5I5), CMPR_SYNY3  (Q55459), CYNR_ECO57  (Q8X4M5), 
CYNR_ECOLI  (P27111), CYSB_ECO57  (P0A9F5), CYSB_ECOL6  (P0A9F4), 
CYSB_ECOLI  (P0A9F3), CYSB_HAEIN  (P45105), CYSB_KLEPN  (P45600), 
CYSB_SALTY  (P06614), CYSB_THIRO  (P52675), CYSL_BACSU  (P39647), 
CZCR_BACAH  (A0R8S0), CZCR_BACAN  (Q81VJ1), CZCR_BACC1  (Q73EY2), 
CZCR_BACCR  (Q81IX0), CZCR_BACCZ  (Q63H01), CZCR_BACHK  (Q6HPH4), 
CZCR_BACSU  (P71025), DGDR_BURCE  (P16931), DMLR_ECOLI  (P76250), 
DSDC_ECOLI  (P46068), ESTR_ACIAD  (P52667), GALR_PSEPK  (Q88JX7), 
GBPR_AZOBR  (P52661), GBPR_RHIRD  (P25547), GCVA_ECO57  (P0A9F8), 
GCVA_ECOL6  (P0A9F7), GCVA_ECOLI  (P0A9F6), GCVA_HAEIN  (P45099), 
GLTC_BACSU  (P20668), GLTR_BACSU  (P94501), HCAR_ECOLI  (Q47141), 
HDFR_ECO24  (A7ZTW7), HDFR_ECO27  (B7UMM1), HDFR_ECO45  (B7MGH6), 
HDFR_ECO55  (B7L8A6), HDFR_ECO57  (Q8XAW1), HDFR_ECO5E  (B5YY14), 
HDFR_ECO7I  (B7NU32), HDFR_ECO81  (B7N260), HDFR_ECO8A  (B7M5B2), 
HDFR_ECOBW  (C4ZZ35), HDFR_ECODH  (B1X9Y2), HDFR_ECOHS  (A8A6M0), 
HDFR_ECOL5  (Q0TAV4), HDFR_ECOL6  (P59369), HDFR_ECOLC  (B1IWY2), 
HDFR_ECOLI  (P0A8R9), HDFR_ECOLU  (B7NF72), HDFR_ECOSE  (B6I4A0), 
HDFR_ECOSM  (B1LLU0), HDFR_ECOUT  (Q1R4H3), HDFR_ESCF3  (B7LUJ5), 
HDFR_SALA4  (B5EZ22), HDFR_SALDC  (B5FN59), HDFR_SALHS  (B4TAZ8), 
HDFR_SALNS  (B4SYF7), HDFR_SALPA  (Q5PJZ0), HDFR_SALPB  (A9MXD5), 
HDFR_SALPC  (C0Q2U0), HDFR_SALPK  (B5BIR0), HDFR_SALSV  (B4TNR5), 
HDFR_SALTI  (P0A2Q1), HDFR_SALTY  (P0A2Q0), HDFR_SHIB3  (B2TU26), 
HDFR_SHIBS  (Q31UM0), HDFR_SHIDS  (Q329U3), HDFR_SHIF8  (Q0SYV7), 
HDFR_SHIFL  (P0A8S0), HDFR_SHISS  (Q3YVK2), HDFR_YERE8  (A1JI47), 
HDFR_YERP3  (A7FD20), HDFR_YERPA  (Q1CBT5), HDFR_YERPB  (B2JZG4), 
HDFR_YERPE  (Q8ZAA7), HDFR_YERPG  (A9R8E7), HDFR_YERPN  (Q1CNN4), 
HDFR_YERPP  (A4TRF4), HDFR_YERPS  (Q66G51), HDFR_YERPY  (B1JQ39), 
HVRB_RHOCB  (P42507), ICIA_AERSA  (P70773), ICIA_CITK8  (A8APC5), 
ICIA_CROS8  (A7MR91), ICIA_ECO24  (A7ZR24), ICIA_ECO27  (B7UHW2), 
ICIA_ECO45  (B7MMA1), ICIA_ECO55  (B7LFH3), ICIA_ECO57  (P0A8S3), 
ICIA_ECO5E  (B5YQA9), ICIA_ECO7I  (B7NHX5), ICIA_ECO81  (B7MZ67), 
ICIA_ECO8A  (B7LYT3), ICIA_ECOBW  (C5A0I6), ICIA_ECODH  (B1XEK1), 
ICIA_ECOHS  (A8A456), ICIA_ECOL5  (Q0TDT7), ICIA_ECOL6  (P0A8S2), 
ICIA_ECOLC  (B1IT87), ICIA_ECOLI  (P0A8S1), ICIA_ECOLU  (B7N7G1), 
ICIA_ECOSE  (B6I748), ICIA_ECOSM  (B1LDC0), ICIA_ECOUT  (Q1R7B4), 
ICIA_EDWI9  (O52399), ICIA_ENT38  (A4WE66), ICIA_ERWT9  (B2VF18), 
ICIA_ESCF3  (B7LPC9), ICIA_KLEP3  (B5XUC3), ICIA_KLEP7  (A6TDS6), 
ICIA_PECAS  (Q6D092), ICIA_PECCP  (C6DF35), ICIA_PHOLL  (Q7N185), 
ICIA_PHOPR  (Q6LMN6), ICIA_PROMH  (B4F0Q1), ICIA_PSEAB  (Q02H78), 
ICIA_PSEAE  (Q9HW38), ICIA_PSEF5  (Q4K779), ICIA_PSEPF  (Q3K7N4), 
ICIA_SALA4  (B5F5I9), ICIA_SALAR  (A9MRG1), ICIA_SALCH  (Q57K51), 
ICIA_SALDC  (B5FUH7), ICIA_SALEP  (B5QXJ1), ICIA_SALG2  (B5RE25), 
ICIA_SALHS  (B4THE6), ICIA_SALNS  (B4T5G4), ICIA_SALPA  (Q5PJH0), 
ICIA_SALPB  (A9N3P8), ICIA_SALPC  (C0PY38), ICIA_SALPK  (B5BFM9), 
ICIA_SALSV  (B4TV33), ICIA_SALTI  (P58508), ICIA_SALTY  (P58509), 
ICIA_SERP5  (A8GIT0), ICIA_SHIB3  (B2U0T2), ICIA_SHIBS  (Q31WH5), 
ICIA_SHIDS  (Q32BX8), ICIA_SHIF8  (Q0T0Y4), ICIA_SHIFL  (P0A8S4), 
ICIA_SHISS  (Q3YXV6), ICIA_SODGM  (Q2NRD9), ICIA_VIBC3  (A5F9F1), 
ICIA_VIBCH  (Q9KUN3), ICIA_VIBCM  (C3LRZ9), ICIA_VIBPA  (Q87LL6), 
ICIA_VIBVU  (Q8DC96), ICIA_VIBVY  (Q7MHL5), ICIA_YERE8  (A1JPP6), 
ICIA_YERP3  (A7FF10), ICIA_YERPA  (Q1CB53), ICIA_YERPB  (B2K0R5), 
ICIA_YERPE  (P58510), ICIA_YERPG  (A9R4J7), ICIA_YERPN  (Q1CEY8), 
ICIA_YERPP  (A4TI95), ICIA_YERPS  (Q666Q6), ICIA_YERPY  (B1JNR6), 
ILVR_CAUCR  (P52670), ILVY_ECOLI  (P05827), ILVY_HAEIN  (P44821), 
ILVY_SALTI  (P0A2Q3), ILVY_SALTY  (P0A2Q2), IRGB_VIBC3  (A5F9F9), 
IRGB_VIBCH  (P0C6D1), LEUO_ECOLI  (P10151), LEUO_SALTY  (P46924), 
LINR_SPHPI  (Q9ZN79), LRHA_ECO57  (Q8VWE6), LRHA_ECOLI  (P36771), 
LRRA_SYNE7  (P52691), LTRA_KLEPN  (P52689), LYSG_COREF  (Q8RQM5), 
LYSG_CORGL  (P94632), LYSR_ECOLI  (P03030), MAUR_KLEPN  (P52684), 
MAUR_PARDE  (P52685), METR_BUCAP  (Q8KA72), METR_ECO57  (P0A9G0), 
METR_ECOLI  (P0A9F9), METR_HAEIN  (P45349), METR_SALTI  (P0A2Q5), 
METR_SALTY  (P0A2Q4), METR_SHIFL  (P0A9G1), MLER_LACLA  (P16400), 
MPRR1_STRCH (P43160), MPRR2_STRCO (Q9L127), MPRR_STRLI  (P43161), 
NAC_ECOLI   (Q47005), NAC_ENTAE   (Q08597), NAGR_RALSP  (Q9EXL7), 
NAHR_PSEPU  (P10183), NHAR_ECOLI  (P0A9G2), NHAR_SHIFL  (P0A9G3), 
NHAR_VIBCH  (P52692), NMCR_ENTCL  (P52676), NOCR_AGRT5  (Q00678), 
NOCR_AGRT7  (P35112), NODD1_BRADU (Q45264), NODD1_BRAEL (P50323), 
NODD1_BRAJP (P12232), NODD1_BRASN (P50327), NODD1_RHIGA (P50331), 
NODD1_RHILO (Q52838), NODD1_RHILP (P23718), NODD1_RHIME (P03031), 
NODD1_RHISN (P55359), NODD1_RHITR (Q02876), NODD2_BRADU (Q45263), 
NODD2_BRAEL (P50324), NODD2_BRAJP (P12233), NODD2_BRASN (P50328), 
NODD2_RHILP (P23719), NODD2_RHIME (P08719), NODD2_RHISN (P55700), 
NODD2_RHITR (P32008), NODD3_RHILO (Q52779), NODD3_RHILP (P23720), 
NODD3_RHIME (P23190), NODD_AZOC5  (P20669), NODD_BRASP  (P04682), 
NODD_RHILE  (P16556), NODD_RHILT  (P04680), NODD_RHILV  (P04681), 
NTCB_SYNE7  (P52693), NTCB_SYNY3  (P74422), OCCR_AGRT4  (P0A4T4), 
OCCR_RHIML  (P72294), OCCR_RHIRD  (P0A4T3), OPRR_PSEAE  (Q01610), 
OXYR_DICCH  (Q9X725), OXYR_ECO57  (P0ACQ6), OXYR_ECOL6  (P0ACQ5), 
OXYR_ECOLI  (P0ACQ4), OXYR_HAEIN  (P44418), OXYR_MYCAV  (P52677), 
OXYR_MYCLE  (P52678), OXYR_MYCMR  (O87324), OXYR_MYCXE  (O87883), 
OXYR_PECCC  (P71318), OXYR_STRVD  (Q9X5P2), PCAQ_AGRT5  (P0A4T6), 
PCAQ_RHIRD  (P0A4T7), PCPR_SPHCR  (P52679), PECT_DICD3  (P52662), 
PERR_ECOLI  (Q57083), PHCA_RALSO  (P52698), PTXE_PSEST  (O69055), 
PTXR_PSEAE  (P72131), RBCR_ACIFR  (Q06610), RBCR_ALLVI  (P25544), 
RBCR_ANAVT  (Q3MCB5), RBCR_CHLAT  (A2CI69), RBCR_CYACA  (O19892), 
RBCR_CYAME  (Q85G62), RBCR_CYAPA  (P48271), RBCR_EMIHU  (Q4G384), 
RBCR_GRATL  (Q6B936), RBCR_GUITH  (O78432), RBCR_NOSS1  (Q8YQ82), 
RBCR_ODOSI  (P49518), RBCR_PHATC  (A0T0G2), RBCR_PORPU  (P51205), 
RBCR_PYRYE  (Q1XDT2), RBCR_SYNY3  (P73123), RBCR_THAPS  (A0T0V5), 
SDSB_PSES9  (P52686), SINR_SALTY  (P37459), SMER_SERMA  (P52683), 
SOXR_ARTST  (Q44311), SPVR_SALDU  (P24417), SYRM1_RHISN (P55619), 
SYRM2_RHISN (P55733), SYRM_RHIET  (Q08812), SYRM_RHIME  (P18561), 
TCBR_PSESQ  (P27102), TDCA_ECO57  (P0ACQ8), TDCA_ECOLI  (P0ACQ7), 
TDCA_SHIFL  (P0ACQ9), TFDR_CUPPJ  (Q46M57), TFDS_CUPPJ  (Q46M54), 
TFDT_CUPPJ  (P42427), TRPI_PSEAE  (P11720), TRPI_PSESY  (P34818), 
TTDR_ECO57  (Q8XBK9), TTDR_ECOL5  (Q0TD46), TTDR_ECOL6  (Q8FDH0), 
TTDR_ECOLI  (P45463), TTDR_ECOUT  (Q1R6S1), TTUA3_AGRVI (P70785), 
TTUA4_AGRVI (P52669), VRPR_SALTY  (P13041), XAPR_ECOLI  (P23841), 
Y1120_METJA (Q58520), Y1364_HAEIN (P43011), Y1985_MYCTO (P9WMF4), 
Y1985_MYCTU (P9WMF5), Y2007_MYCBO (P67666), Y2282_MYCTO (P9WMF2), 
Y2282_MYCTU (P9WMF3), Y2303_MYCBO (P67668), Y2383_VIBCH (Q9KPI4), 
Y300_METJA  (Q57748), Y377_MYCTO  (P9WMF6), Y377_MYCTU  (P9WMF7), 
Y4MQ_RHISN  (P55576), Y775_HAEIN  (P44876), YAFC_ECOLI  (P30864), 
YAHB_ECOLI  (P77700), YBDO_ECOLI  (P77746), YBEF_ECOLI  (P30979), 
YBHD_ECOLI  (P52696), YCAN_ECOLI  (P75836), YCGK_BACSU  (P94387), 
YCJZ_ECOLI  (P77333), YDCI_ECOLI  (P77171), YDHB_ECO57  (P0ACR3), 
YDHB_ECOLI  (P0ACR2), YEEY_ECOLI  (P76369), YEIE_ECO57  (P0ACR6), 
YEIE_ECOL6  (P0ACR5), YEIE_ECOLI  (P0ACR4), YFER_ECOLI  (P0ACR7), 
YFER_SHIFL  (P0ACR8), YFIE_ECOLI  (P33634), YGFI_ECOLI  (P52044), 
YHAJ_ECO57  (P67661), YHAJ_ECOLI  (P67660), YHJC_ECOLI  (P37641), 
YIAU_ECOLI  (P37682), YIBL_AZOVI  (P96194), YIDZ_CITK8  (A8ACM1), 
YIDZ_ECO24  (A7ZTR6), YIDZ_ECO55  (B7L852), YIDZ_ECO57  (Q8XB23), 
YIDZ_ECO5E  (B5YXB5), YIDZ_ECOBW  (C4ZYY9), YIDZ_ECODH  (B1X9U0), 
YIDZ_ECOHS  (A8A6H3), YIDZ_ECOL6  (Q8FBU9), YIDZ_ECOLC  (B1IX27), 
YIDZ_ECOLI  (P31463), YIDZ_ECOLU  (B7NF28), YIDZ_ECOSE  (B6I3U4), 
YIDZ_SALA4  (B5EYX8), YIDZ_SALDC  (B5FN16), YIDZ_SALEP  (B5QUQ7), 
YIDZ_SALHS  (B4TAV5), YIDZ_SALNS  (B4SYB4), YIDZ_SALPA  (Q5PKV5), 
YIDZ_SALSV  (B4TN13), YIDZ_SALTI  (Q8Z2P0), YIDZ_SALTY  (Q8ZKY0), 
YIDZ_SHIB3  (B2TUR4), YIDZ_SHIBS  (Q31UW5), YIDZ_SHIDS  (Q328Z9), 
YIDZ_SHISS  (Q3YWK2), YJIE_ECOLI  (P39376), YKUM_BACSU  (O34827), 
YLAC_STAXY  (O33812), YNEJ_ECOLI  (P77309), YNFL_ECOLI  (P77559), 
YOAU_BACSU  (O34701), YOFA_BACA2  (A7Z5E4), YOFA_BACSU  (O34685), 
YRAN_BACSU  (O07906), YTLI_BACSU  (O35038), YUST_BACSU  (O32186), 
YVBU_BACSU  (O32255), YWBI_BACSU  (P39592), YWQM_BACSU  (P96725), 
YXJO_BACSU  (P55181), YYBE_BACSU  (P37499)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

MAUR_PARVE  (Q56462), TRPI_PSEPU  (P36414)

		
PDB
[Detailed view]
7 PDB

3ISP; 3K1M; 3K1N; 3K1P; 3M1E; 4IHS; 4IHT

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission