Entry: PS50977

General information about the entry

Entry name [info] HTH_TETR_2
Accession [info] PS50977
Entry type [info] MATRIX
Date [info] APR-2004 (CREATED); OCT-2013 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00830
Associated ProRule [info] PRU00335

Name and characterization of the entry

Description [info] TetR-type HTH domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=61;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=56;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6312854; R2=0.0271566; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=2488.1611328; R2=3.2867298; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=382; H_SCORE=3744; N_SCORE=13.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=143; H_SCORE=2958; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='E'; M= -1, -5,-24, -4,  7,-22,-11, -8,-18,  0,-16,-11, -4, -2,  3, -1,  0, -4,-15,-25,-15,  3;
/M: SY='E'; M= -5,  0,-24, -1,  3,-16,-15, -6,-16,  0,-13, -9,  0,-12,  3,  3, -2, -4,-13,-24,-11,  2;
/M: SY='T'; M= -2, -2,-18, -7, -7,-15,-16,-12,-11, -2,-10, -8,  0,-16, -6,  4,  4, 13, -4,-27,-11, -8;
/M: SY='R'; M=-11, -7,-27, -7,  2,-16,-19, -5,-20, 12,-15, -8, -4,-12,  4, 22, -8, -7,-15,-19, -9,  1;
/M: SY='E'; M=  0,  5,-25,  7, 18,-28,-12, -4,-25,  9,-21,-15,  2, -7, 10,  5,  1, -6,-21,-26,-16, 13;
/M: SY='R'; M= -1, -7,-23, -8,  0,-21,-16, -3,-17,  9,-14, -7, -4,-15,  7, 12, -2, -6,-13,-20,-10,  3;
/M: SY='I'; M= -6,-28,-20,-34,-25,  3,-32,-25, 30,-26, 23, 15,-23,-24,-20,-22,-19, -8, 21,-21, -2,-25;
/M: SY='L'; M= -8,-23,-23,-26,-16,  2,-28,-16, 15,-18, 20, 11,-20,-23,-15,-14,-18, -8, 10,-18,  0,-17;
/M: SY='D'; M= -5, 10,-24, 14, 13,-25,-11, -2,-23, -1,-17,-15,  5,-12,  5, -1,  3, -3,-19,-30,-15,  8;
/M: SY='A'; M= 24, -9,-15,-15, -6,-18, -6,-15, -9, -9,-10, -8, -8,-13, -6,-13,  7,  2, -2,-24,-16, -6;
/M: SY='A'; M= 26,-13,-14,-20,-14,-12, -4,-21, -5,-15, -4, -6,-11,-13,-14,-19,  4,  3,  1,-21,-15,-14;
/M: SY='L'; M= -6,-18,-22,-20,-10, -2,-22,-14,  3,-13, 11,  6,-17,-21,-10,-10,-13, -5,  2,-14, -4,-10;
/M: SY='E'; M= -5,  4,-25,  7, 13,-25,-15, -2,-22,  6,-17,-11,  1,-12,  8,  8, -1, -6,-18,-27,-14, 10;
/M: SY='L'; M= -5,-23,-17,-24,-14,  1,-27,-19, 13,-23, 30, 12,-23,-24,-14,-18,-19, -5,  8,-23, -5,-14;
/M: SY='F'; M= -9,-26,-14,-31,-23, 24,-27,-18,  9,-25, 18,  8,-22,-27,-24,-19,-18, -8,  7,-10,  7,-23;
/M: SY='A'; M=  1, -5,-23, -7, -2,-17, -7,-10,-13, -6,-10, -8, -5,-16, -3, -7, -2, -4,-10,-19,-11, -3;
/M: SY='E'; M= -7,  7,-24, 11, 23,-27,-17, -2,-25,  7,-18,-14,  1, -9, 14,  5,  1, -4,-22,-28,-15, 18;
/M: SY='R'; M=-11,  1,-26,  0,  2,-16,-16,  7,-21,  9,-19, -9,  4,-17,  4, 12, -4, -5,-17,-21, -2,  1;
/M: SY='G'; M=  1, -7,-28, -6,-12,-28, 38,-15,-32,-12,-27,-18, -1, -9,-13,-13,  2,-13,-24,-23,-25,-13;
/M: SY='Y'; M=-12,-20,-26,-22,-16, 13,-25, -8,  3,-16,  1,  2,-17,-13,-15,-14,-14, -7, -1, -4, 17,-17;
/M: SY='E'; M=  0,  6,-23,  6,  7,-20,-11,  0,-20, -3,-16,-12,  3,-12,  1, -5,  1, -4,-16,-27,-12,  3;
/I:         I=-13; MD=-27;
/M: SY='A'; M=  5, -2,-21, -3, -1,-21,  1, -4,-21, -1,-18,-12,  0,-10, -1,  2,  1, -7,-15,-22,-14, -3; D=-13;
/I:         I=-13; MD=-27;
/M: SY='V'; M=  1,-14,-15,-18,-16, -4,-20,-19,  9,-17, 10,  5,-13,-18,-15,-16, -5,  7, 11,-23, -7,-16; D=-13;
/I:         I=-13; MI=0; MD=-27; IM=0; DM=-27;
/M: SY='T'; M=  5, -1,-12, -6, -6,-16, -6,-15,-16,-10,-20,-15,  4, -9, -6,-10, 27, 31, -7,-34,-16, -6;
/M: SY='I'; M= -6,-23,-19,-28,-21, -1,-27,-16, 22,-20, 17, 21,-20,-22,-15,-18,-15, -4, 19,-24, -4,-19;
/M: SY='R'; M=  0,  4,-24,  3,  7,-24,-10, -5,-23,  6,-20,-14,  5, -8,  4, 10,  2, -5,-19,-27,-17,  4;
/M: SY='E'; M=  2,  5,-24,  9, 19,-27,-14, -5,-21,  4,-16,-11, -1, -9, 12, -2,  1, -6,-18,-27,-16, 15;
/M: SY='I'; M= -6,-29,-21,-35,-27,  1,-35,-28, 37,-27, 22, 17,-24,-24,-22,-26,-19, -8, 29,-22, -3,-27;
/M: SY='A'; M= 28,-11, -4,-18,-13,-16, -6,-20, -8,-13, -8, -8, -9,-15,-13,-18,  8,  4,  2,-26,-18,-13;
/M: SY='R'; M= -5,  0,-26,  1, 14,-25,-16, -4,-25, 18,-21,-12,  1,-11, 10, 19, -1, -5,-19,-25,-14, 11;
/M: SY='R'; M= -2, -5,-24, -7,  3,-18,-14, -2,-17,  4,-12, -8, -2,-15,  3, 11, -2, -4,-14,-23, -9,  1;
/M: SY='A'; M= 33,-12, -6,-19,-12,-16, -5,-20, -8,-13, -6, -8,-11,-14,-12,-19,  8,  2,  1,-24,-18,-12;
/M: SY='G'; M= -1, -5,-29, -5, -9,-29, 43,-15,-34, -9,-26,-17,  1,-17,-10,-12, -1,-16,-27,-22,-25,-10;
/M: SY='V'; M= -2,-27,-12,-30,-26, -2,-30,-25, 27,-21, 11, 11,-24,-26,-22,-21,-12, -3, 33,-25, -5,-25;
/M: SY='S'; M=  5,  0,-18, -3, -5,-21,  6, -9,-20, -9,-24,-16,  8, -9, -6,-10, 16,  6,-14,-32,-19, -6;
/M: SY='R'; M= -7, -9,-26, -9, -1,-21,-19, -6,-17, 14,-17, -7, -6, -2,  2, 16, -6, -6,-12,-24,-12, -2;
/M: SY='G'; M= 13,-10,-22,-13,-10,-24, 15,-16,-23, -8,-20,-13, -5, -5, -8, -8,  4, -4,-16,-23,-21,-10;
/M: SY='T'; M= 11, -3,-12,-11, -8,-14,-12,-14,-10,-10,-11, -9,  0,-12, -6,-12, 16, 23, -4,-28,-12, -7;
/M: SY='F'; M= -8,-29,-21,-34,-25, 22,-30,-23, 20,-27, 22, 12,-24,-23,-25,-22,-20, -8, 15,-14,  5,-25;
/M: SY='Y'; M=-17,-18,-27,-20,-18, 26,-25, 16, -4,-12, -2, -1,-16,-27,-11,-11,-15, -8,-10, 17, 59,-18;
/M: SY='R'; M=-12, -9,-27,-11, -6, -8,-18,  7,-18,  4,-12, -7, -4,-21, -1, 19,-10, -9,-15, -7,  8, -7;
/M: SY='H'; M=-16,-10,-29,-11, -7,  2,-23, 37,-16, -4,-11, -3, -5,-23,  0,  5,-12,-11,-18, -2, 34, -7;
/M: SY='F'; M=-18,-30,-24,-37,-29, 59,-29,-18,  0,-26,  5, -2,-24,-30,-33,-19,-22,-12, -1, 28, 31,-28;
/M: SY='P'; M= -2, -5,-27, -3,  2,-26,  0,-11,-25,  3,-24,-15, -2,  5, -3,  0,  0, -6,-20,-26,-20, -2;
/M: SY='S'; M= -1, 13,-18, 13,  0,-24,  5, -8,-25, -7,-28,-21, 16,-13, -4, -9, 20, 10,-18,-36,-20, -2;
/M: SY='K'; M=-11, -8,-27, -9,  1,-19,-21,-11,-17, 27,-13, -3, -7,-16,  2, 22,-12, -9,-11,-20, -8,  0;
/M: SY='E'; M= -8, 12,-27, 19, 24,-26,-13, -3,-27,  5,-21,-18,  4, -7,  8,  1,  1, -6,-23,-28,-15, 16;
/M: SY='D'; M=  5, 11,-23, 15, 12,-28, -4, -7,-25, -2,-20,-17,  3,-10,  2, -9,  4, -6,-18,-29,-19,  7;
/M: SY='L'; M= -7,-29,-19,-30,-21, 12,-29,-21, 20,-27, 36, 16,-27,-28,-21,-20,-24, -8, 14,-19,  0,-21;
/M: SY='L'; M= -7,-26,-17,-30,-23, 14,-25,-19, 14,-22, 20, 12,-23,-26,-21,-15,-19, -8, 12,-16,  2,-22;
/M: SY='A'; M=  4, -7,-19, -9, -4,-14,-15,-14, -5, -9, -1, -3, -8,-16, -7, -9, -2,  1, -1,-26,-12, -6;
/M: SY='A'; M= 12,  1,-20,  0,  6,-19, -9, -7,-18, -5,-15,-13, -1,-11, -1,-10,  5, -2,-13,-22,-13,  3;
/M: SY='V'; M=  1,-22,-15,-26,-20, -1,-23,-20, 14,-19, 12, 10,-21,-19,-18,-19,-12, -3, 15,-21, -4,-20;
/M: SY='L'; M=  1,-22,-15,-27,-19,  7,-19,-17,  7,-21, 11,  6,-19,-23,-19,-19,-13, -7,  6,-14,  1,-19;
/M: SY='D'; M= -9,  3,-25,  6,  6,-19,-18, -4,-14, -2,-11, -9,  0,-13,  0, -2, -4, -6,-12,-27,-10,  2;
/M: SY='E'; M= -7,  3,-26,  6, 11,-21,-15,  0,-23,  4,-17,-13,  2,-13,  7,  8, -1, -6,-20,-21, -9,  8;
/M: SY='Y'; M= -2,-14,-23,-16,-11, -6,-14, -4, -2,-12, -2,  0,-11,-19, -8,-10, -8, -8, -1,-17,  2,-11;
/M: SY='I'; M= -7,-15,-20,-17,-12, -1,-22,-14,  5,-15,  4,  2,-13,-19,-12,-14, -9, -3,  5,-20, -1,-13;
/M: SY='E'; M= -2,  1,-24,  3, 10,-22,-10, -7,-22,  2,-18,-12,  0, -8,  6,  2,  3, -3,-18,-26,-15,  7;
/M: SY='Q'; M= -6, -4,-26, -4,  3,-19,-14, -6,-16,  4,-14, -6, -4,-11,  5,  4, -5, -6,-14,-20, -9,  3;
/M: SY='L'; M= -7,-19,-16,-21,-16,  2,-25,-14,  4,-16,  6,  4,-19,-22,-15,-14,-15, -8,  4, -9,  3,-16;
/I:         E1=0; IE=-105; DE=-105;
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 367 in 365 different sequences
Number of true positive hits 367 in 365 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.46 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] PS_Langendijk_Genevaux
Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Feature key [info] DOMAIN
Feature description [info] HTH tetR-type
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
365 sequences

ACNR_CORDI  (Q6NH62    ), ACNR_COREF  (Q8FTA6    ), ACNR_CORGL  (Q8NQ97    ), 
ACNR_CORJK  (Q4JVM3    ), ACRR_ECOL6  (P0ACT0    ), ACRR_ECOLI  (P0ACS9    ), 
ACRR_SHIFL  (P0ACT1    ), ACUR_RHOS4  (Q3J6K8    ), AFRP_STRGR  (Q9ZN78    ), 
ARPR_PSEPU  (Q9KJC4    ), BDCR_ECOLI  (P39334    ), BEPR_BRUSU  (Q8G2M8    ), 
BETI1_CHRSD (Q1QXD9    ), BETI2_CHRSD (Q9L4K2    ), BETI_AGRFC  (Q8UH57    ), 
BETI_BRUA2  (Q2YMS6    ), BETI_BRUAB  (Q57EH9    ), BETI_BRUC2  (A9M9H9    ), 
BETI_BRUMB  (C0RHQ4    ), BETI_BRUME  (Q8YFY3    ), BETI_BRUSI  (B0CKN5    ), 
BETI_BRUSU  (Q8G1Z7    ), BETI_BURA4  (B1Z032    ), BETI_BURCA  (Q1BQE0    ), 
BETI_BURCC  (B1K709    ), BETI_BURCH  (A0B2F5    ), BETI_BURCJ  (B4EHJ0    ), 
BETI_BURCM  (Q0B713    ), BETI_BURL3  (Q39A42    ), BETI_BURM1  (A9AN01    ), 
BETI_BURM7  (A3MEC5    ), BETI_BURM9  (A2RWD7    ), BETI_BURMA  (Q62CH6    ), 
BETI_BURP0  (A3P6A9    ), BETI_BURP1  (Q3JLL9    ), BETI_BURP6  (A3NKP7    ), 
BETI_BURPS  (Q63KK9    ), BETI_BURTA  (Q2T6C8    ), BETI_BURVG  (A4JJG4    ), 
BETI_BURXL  (Q13NG5    ), BETI_CROS8  (A7MFA6    ), BETI_ECO24  (A7ZI52    ), 
BETI_ECO27  (B7UJG6    ), BETI_ECO45  (B7MCD2    ), BETI_ECO55  (B7L442    ), 
BETI_ECO57  (Q8X6C3    ), BETI_ECO5E  (B5Z1R2    ), BETI_ECO7I  (B7NK49    ), 
BETI_ECO8A  (B7M2V7    ), BETI_ECODH  (B1XET8    ), BETI_ECOHS  (A7ZWV6    ), 
BETI_ECOL5  (Q0TKV9    ), BETI_ECOL6  (Q8FKI7    ), BETI_ECOLC  (B1J0W4    ), 
BETI_ECOLI  (P17446    ), BETI_ECOLU  (B7N8L5    ), BETI_ECOSE  (B6I093    ), 
BETI_ECOSM  (B1LIJ9    ), BETI_ECOUT  (Q1RFM1    ), BETI_KLEP3  (B5Y006    ), 
BETI_OCHA4  (A6X2G6    ), BETI_PARP8  (B2JS87    ), BETI_PARPJ  (B2TCK0    ), 
BETI_PECAS  (Q6D6E1    ), BETI_PECCP  (C6DKY6    ), BETI_PROMH  (B4EX96    ), 
BETI_PSE14  (Q48CM5    ), BETI_PSEA7  (A6VEI5    ), BETI_PSEA8  (B7V5R5    ), 
BETI_PSEAB  (Q02DY8    ), BETI_PSEAE  (Q9HTJ0    ), BETI_PSEF5  (Q4K4K9    ), 
BETI_PSEFS  (C3K3D1    ), BETI_PSEMY  (A4XPI7    ), BETI_PSEPF  (Q3K5H5    ), 
BETI_PSESM  (Q88AF0    ), BETI_PSEU2  (Q4ZM61    ), BETI_RHILO  (Q985M2    ), 
BETI_RHIME  (O69786    ), BETI_SERP5  (A8GBX7    ), BETI_SHIF8  (Q0T7M8    ), 
BETI_STRM5  (B4SHW1    ), BETI_VIBCB  (A7N212    ), BETI_VIBPA  (Q87H51    ), 
BETI_VIBTL  (B7VQ27    ), BETI_VIBVU  (Q8D3K4    ), BETI_VIBVY  (Q7MF14    ), 
BETI_YERP3  (A7FKL4    ), BETI_YERPA  (Q1C930    ), BETI_YERPB  (B2K8U6    ), 
BETI_YERPE  (Q8ZGV8    ), BETI_YERPN  (Q1CFR9    ), BETI_YERPP  (A4TNP0    ), 
BETI_YERPS  (Q66D52    ), BM3R1_BACME (P43506    ), COMR_ECOLI  (P75952    ), 
DHAR_MYCSX  (Q9RAJ1    ), DHAS_LACLA  (Q9CIV9    ), ENVR_ECO57  (P0ACT3    ), 
ENVR_ECOLI  (P0ACT2    ), ETHR_MYCBO  (Q7TVI1    ), ETHR_MYCS2  (A0R666    ), 
ETHR_MYCTO  (P9WMC0    ), ETHR_MYCTU  (P9WMC1    ), FABR_CITK8  (A8AKV8    ), 
FABR_CROS8  (A7ML90    ), FABR_ECO24  (A7ZUI3    ), FABR_ECO57  (Q7A964    ), 
FABR_ECOBW  (C5A0R2    ), FABR_ECODH  (B1XBX4    ), FABR_ECOHS  (A8A771    ), 
FABR_ECOK1  (A1AIE5    ), FABR_ECOL5  (Q0TA93    ), FABR_ECOL6  (Q8FB90    ), 
FABR_ECOLI  (P0ACU5    ), FABR_ECOUT  (Q1R3U4    ), FABR_KLEP7  (A6TGE7    ), 
FABR_SALAR  (A9MHG9    ), FABR_SALCH  (Q57H90    ), FABR_SALPA  (Q5PK70    ), 
FABR_SALPC  (C0Q479    ), FABR_SALPK  (B5BJN7    ), FABR_SALTI  (Q8XGD6    ), 
FABR_SALTY  (Q7CPB8    ), FABR_SHIB3  (B2TWF8    ), FABR_SHIBS  (Q31U25    ), 
FABR_SHIDS  (Q32AE3    ), FABR_SHIF8  (Q0SY28    ), FABR_SHIFL  (P0ACU6    ), 
FABR_SHISS  (Q3YV13    ), FABR_YERE8  (A1JI38    ), FABR_YERP3  (A7FD11    ), 
FABR_YERPA  (Q1CBU4    ), FABR_YERPB  (B2JZF5    ), FABR_YERPE  (Q7CL09    ), 
FABR_YERPG  (A9R6N6    ), FABR_YERPN  (Q1CNP3    ), FABR_YERPP  (A4TRG3    ), 
FABR_YERPS  (Q66G60    ), FABR_YERPY  (B1JQ48    ), FADR_BACSU  (P94548    ), 
FATR_BACSU  (O08335    ), HTHR_STRCO  (Q9ADP7    ), ICAR_STAA8  (Q9RQQ0    ), 
ICAR_STAAC  (Q5HCN2    ), ICAR_STAAE  (A6QKF4    ), ICAR_STAAM  (Q7A2K5    ), 
ICAR_STAAN  (Q7A352    ), ICAR_STAAR  (Q6GDD9    ), ICAR_STAAS  (Q6G609    ), 
ICAR_STAAW  (Q79ZV4    ), ICAR_STAEP  (Q8GLC6    ), ICAR_STAEQ  (Q5HKQ1    ), 
KSTR2_MYCS2 (A0R4Z6    ), KSTR2_MYCTO (P9WMB8    ), KSTR2_MYCTU (P9WMB9    ), 
KSTR2_RHOJR (Q0S7V2    ), KSTR_MYCS2  (A0R528    ), KSTR_MYCTU  (P96856    ), 
KSTR_RHOJR  (Q0S868    ), LMRA_BACSU  (O34619    ), LUXR_VIBHA  (P21308    ), 
MCE3R_MYCTU (P95251    ), MEPR_PSEPU  (P0C068    ), MFTR_MYCTO  (P9WMB6    ), 
MFTR_MYCTU  (P9WMB7    ), MTRR_NEIGO  (P39897    ), NEMR_ECOL6  (P67431    ), 
NEMR_ECOLI  (P67430    ), NICS_PSEPK  (Q88FX7    ), PKSA_BACSU  (O34381    ), 
QACR_STAAM  (P0A0N3    ), QACR_STAAU  (P0A0N4    ), QACR_STAHA  (P0A0N5    ), 
RCDA_ECOLI  (P75811    ), RUTR_ECO57  (Q8X4Z7    ), RUTR_ECOL6  (P0ACU3    ), 
RUTR_ECOLI  (P0ACU2    ), RUTR_SHIFL  (P0ACU4    ), SLMA_ACTP2  (A3N3Q5    ), 
SLMA_ACTP7  (B3H337    ), SLMA_ACTPJ  (B0BTZ2    ), SLMA_ALTMD  (F2G1U7    ), 
SLMA_CITK8  (A8ARM8    ), SLMA_COLP3  (Q48AG4    ), SLMA_CROS8  (A7MQB0    ), 
SLMA_ECO24  (A7ZTJ2    ), SLMA_ECO27  (B7UM47    ), SLMA_ECO45  (B7MFK2    ), 
SLMA_ECO55  (B7L761    ), SLMA_ECO57  (Q8X580    ), SLMA_ECO5E  (B5YWD9    ), 
SLMA_ECO7I  (B7NQ02    ), SLMA_ECO81  (B7N282    ), SLMA_ECO8A  (B7M4C6    ), 
SLMA_ECOBW  (C4ZXN3    ), SLMA_ECODH  (B1X975    ), SLMA_ECOHS  (A8A6A3    ), 
SLMA_ECOK1  (A1AHH2    ), SLMA_ECOL5  (Q0TBG8    ), SLMA_ECOL6  (Q8FC86    ), 
SLMA_ECOLC  (B1IYV9    ), SLMA_ECOLI  (P0C093    ), SLMA_ECOLU  (B7NEU5    ), 
SLMA_ECOSE  (B6I3L8    ), SLMA_ECOSM  (B1LK78    ), SLMA_EDWI9  (C5B9D1    ), 
SLMA_ENT38  (A4W508    ), SLMA_ERWT9  (B2VF78    ), SLMA_ESCF3  (B7LVK2    ), 
SLMA_HAEDU  (Q7VN48    ), SLMA_HAEI8  (Q4QLV2    ), SLMA_HAEIE  (A5UDB3    ), 
SLMA_HAEIG  (A5UI96    ), SLMA_HAEIN  (P29280    ), SLMA_HAEPS  (B8F853    ), 
SLMA_IDILO  (Q5QZB7    ), SLMA_KLEP3  (B5XTG2    ), SLMA_KLEP7  (A6TFN2    ), 
SLMA_MANSM  (Q65R67    ), SLMA_MARHV  (A1U6F3    ), SLMA_MARMS  (A6VSX5    ), 
SLMA_PASMU  (Q9CLQ9    ), SLMA_PECAS  (Q6DAW0    ), SLMA_PECCP  (C6DIC4    ), 
SLMA_PHOLL  (Q7MY26    ), SLMA_PHOPR  (Q6LVN6    ), SLMA_PROMH  (B4F0W5    ), 
SLMA_SALA4  (B5EXE5    ), SLMA_SALAR  (A9MKN4    ), SLMA_SALCH  (Q57IA1    ), 
SLMA_SALDC  (B5FM64    ), SLMA_SALEP  (B5R5G5    ), SLMA_SALG2  (B5RGE6    ), 
SLMA_SALHS  (B4T9C5    ), SLMA_SALNS  (B4SXE2    ), SLMA_SALPA  (Q5PC27    ), 
SLMA_SALPB  (A9MVN6    ), SLMA_SALPC  (C0Q1X3    ), SLMA_SALPK  (B5BI15    ), 
SLMA_SALSV  (B4TZY2    ), SLMA_SALTI  (Q8Z2H4    ), SLMA_SALTY  (Q8ZL46    ), 
SLMA_SERP5  (A8GLE8    ), SLMA_SHEAM  (A1S2C9    ), SLMA_SHEB2  (B8E4J2    ), 
SLMA_SHEB5  (A3CZJ3    ), SLMA_SHEB8  (A6WIA3    ), SLMA_SHEB9  (A9KY01    ), 
SLMA_SHEDO  (Q12SF8    ), SLMA_SHEFN  (Q07WF8    ), SLMA_SHEHH  (B0TQK8    ), 
SLMA_SHELP  (A3QIQ2    ), SLMA_SHEON  (Q8E9L9    ), SLMA_SHEPA  (A8H9B3    ), 
SLMA_SHEPC  (A4Y2K8    ), SLMA_SHEPW  (B8CM26    ), SLMA_SHESA  (A0L1S2    ), 
SLMA_SHESH  (A8FQ72    ), SLMA_SHESM  (Q0HE53    ), SLMA_SHESR  (Q0HZU6    ), 
SLMA_SHESW  (A1REU1    ), SLMA_SHEWM  (B1KL08    ), SLMA_SHIB3  (B2TTV5    ), 
SLMA_SHIF8  (Q0SYG8    ), SLMA_SHIFL  (P0C094    ), SLMA_SODGM  (Q2NQT9    ), 
SLMA_VIBCB  (A7MSP5    ), SLMA_VIBCH  (Q9KVD2    ), SLMA_VIBF1  (Q5E8M7    ), 
SLMA_VIBFM  (B5FFF4    ), SLMA_VIBPA  (Q87T90    ), SLMA_VIBTL  (B7VHK0    ), 
SLMA_VIBVU  (Q8DDX7    ), SLMA_VIBVY  (Q7MPT0    ), SLMA_YERE8  (A1JHW9    ), 
SLMA_YERP3  (A7FCT1    ), SLMA_YERPA  (Q1C264    ), SLMA_YERPB  (B2JYN0    ), 
SLMA_YERPE  (Q8ZJP6    ), SLMA_YERPG  (A9R671    ), SLMA_YERPN  (Q1CCZ9    ), 
SLMA_YERPP  (A4TSE0    ), SLMA_YERPS  (Q66GD9    ), SLMA_YERPY  (B1JQX6    ), 
SRPR_PSEPU  (Q9R9T9    ), TCMR_STRGA  (P39885    ), TETC_ECOLX  (P28815    ), 
TETR1_ECOLX (P03038    ), TETR2_ECOLX (P04483    ), TETR3_ECOLX (P03039    ), 
TETR4_ECOLX (P0ACT4    ), TETR4_SALOR (P0ACT5    ), TETR5_ECOLX (P21337    ), 
TETR7_VIBAN (P51560    ), TETR8_PASMD (P51561    ), TETR8_PHODP (P51562    ), 
TTGR_PSEPK  (Q88N29    ), TTGR_PSEPT  (Q9AIU0    ), TTGW_PSEPT  (Q93PU7    ), 
UIDR_ECO57  (P0ACT8    ), UIDR_ECOL6  (P0ACT7    ), UIDR_ECOLI  (P0ACT6    ), 
UIDR_SHIFL  (P0ACT9    ), Y097_STAAR  (Q6GKL1    ), Y1255_MYCTO (P9WMD4    ), 
Y1255_MYCTU (P9WMD5    ), Y1353_MYCTO (P9WMD2    ), Y1353_MYCTU (P9WMD3    ), 
Y1388_MYCBO (P67435    ), Y1556_MYCTO (P9WMD0    ), Y1556_MYCTU (P9WMD1    ), 
Y1581_MYCBO (P67437    ), Y1816_MYCTO (P9WMC8    ), Y1816_MYCTU (P9WMC9    ), 
Y1846_MYCBO (P67439    ), Y2250_MYCTO (P9WMC4    ), Y2250_MYCTU (P9WMC5    ), 
Y2274_MYCBO (Q7VEN0    ), Y2364_STAAN (Q7A3C7    ), Y2452_STAAB (Q2YWD0    ), 
Y2464_STAAS (Q6G696    ), Y2498_STAAW (Q79ZX9    ), Y2515_STAA3 (Q2FDS9    ), 
Y2578_STAAM (Q99R60    ), Y2593_STAAC (Q5HCX3    ), Y2658_STAAR (Q6GDM3    ), 
Y2897_STAA8 (Q2FV42    ), Y2912_MYCTO (P9WMC6    ), Y2912_MYCTU (P9WMC7    ), 
Y2936_MYCBO (P67441    ), Y3405_MYCTO (P9WMC2    ), Y3405_MYCTU (P9WMC3    ), 
Y3439_MYCBO (P67443    ), Y472_MYCTO  (P9WMD8    ), Y472_MYCTU  (P9WMD9    ), 
Y570_HAEIN  (P44757    ), Y6555_BACAN (Q9RMY4    ), Y767_MYCTO  (P9WMD6    ), 
Y767_MYCTU  (P9WMD7    ), Y790_MYCBO  (P67433    ), Y893_HAEIN  (P44923    ), 
YBIH_ECOLI  (P0ACU0    ), YBIH_SHIFL  (P0ACU1    ), YCNC_BACSU  (P94423    ), 
YDES_BACSU  (P96676    ), YDGC_BACSU  (P96701    ), YDH1_XANAU  (P22645    ), 
YERO_BACSU  (O31500    ), YEZE_BACSU  (Q7WY76    ), YFIR_BACSU  (O31560    ), 
YHGD_BACSU  (P32398    ), YJDC_ECOL6  (P0ACU8    ), YJDC_ECOLI  (P0ACU7    ), 
YJDC_SHIFL  (P0ACU9    ), YOBS_BACSU  (O34892    ), YPB3_LACLL  (P42097    ), 
YTTP_BACSU  (O34970    ), YUXN_BACSU  (P40950    ), YVAF_BACSU  (O32228    ), 
YVDT_BACSU  (O07001    ), YVKB_BACSU  (O34643    ), YWCC_BACSU  (P39601    ), 
YXAF_BACSU  (P42105    ), YXBF_BACSU  (P46330    )
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

Y196_MYCTO  (P9WME0    ), Y196_MYCTU  (P9WME1    )

		
PDB
[Detailed view]
151 PDB

1A6I; 1BJZ; 1JT0; 1JT6; 1JTX; 1JTY; 1JUM; 1JUP; 1JUS; 1ORK; 1QPI; 1QVT; 1QVU; 1RKT; 1RKW; 1RPW; 1SGM; 1T56; 1U9N; 1U9O; 1VI0; 2D6Y; 2DTZ; 2F07; 2FJ1; 2G0E; 2GBY; 2HQ5; 2IBD; 2IU5; 2NS7; 2NS8; 2O7O; 2QOP; 2TCT; 2TRT; 2UXH; 2UXI; 2UXO; 2UXP; 2UXU; 2VKE; 2VKV; 2VPR; 2X6O; 2X9D; 2XB5; 2XDN; 2XGC; 2XGD; 2XGE; 2XPU; 2XPV; 2XPW; 2XRL; 2ZCM; 2ZCN; 3BCG; 3BQZ; 3BR0; 3BR1; 3BR2; 3BR3; 3BR5; 3BR6; 3BRU; 3BT9; 3BTC; 3BTI; 3BTJ; 3BTL; 3FK6; 3FK7; 3G1L; 3G1M; 3G1O; 3GEU; 3LOC; 3MNL; 3NXC; 3O8G; 3O8H; 3PM1; 3Q0U; 3Q0V; 3Q0W; 3Q3S; 3QKX; 3QPL; 3SDG; 3SFI; 3TP0; 3TP3; 3VIB; 3WHB; 3WHC; 3ZQF; 3ZQG; 3ZQH; 3ZQI; 4ABZ; 4AC0; 4AC6; 4ACI; 4AF5; 4AUX; 4B1R; 4B3A; 4D7M; 4D7N; 4DW6; 4GCK; 4GCT; 4GFK; 4GFL; 4JYK; 4M3B; 4M3D; 4M3E; 4M3F; 4M3G; 4V2F; 4V2G; 4W1U; 4W97; 4X1E; 4XK4; 4YZE; 5CW8; 5CXG; 5CXI; 5D1R; 5EYR; 5EZG; 5EZH; 5F04; 5F08; 5F0C; 5F0F; 5F0H; 5F1J; 5F27; 5FKK; 5FKL; 5FKM; 5FKN; 5FKO; 5HAW; 5HBU; 5HSZ; 5K58
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission