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Entry: PS51032

General information about the entry

Entry name [info] AP2_ERF
Accession [info] PS51032
Entry type [info] MATRIX
Date [info] 01-NOV-2004 CREATED; 10-MAY-2017 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC51032
Associated ProRule [info] PRU00366

Name and characterization of the entry

Description [info] AP2/ERF domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=59;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=54;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.0207132; R2=0.0131758; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3686.5834961; R2=3.5022883; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=568; H_SCORE=5676; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=416; H_SCORE=5144; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-20; I=-20; B1=-100; E1=-100; MI=-105; MD=-105; IM=-105; DM=-105;
...
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='R'; M=-10,-12,-29,-14,-10,-20, -1, -8,-13,  6,-14, -1, -5,-18, -4,  8,-10,-13,-11,-21,-11, -9;
/M: SY='Y'; M=-18,-19,-29,-19,-17, 22,-28, 19, -4,-13,  0,  0,-17,-19,-11,-11,-19,-11,-12, 13, 54,-18;
/M: SY='R'; M=-15, -9,-28, -9,  1,-21,-21, -6,-25, 32,-21, -8, -3,-18,  7, 50,-10, -9,-14,-21,-10,  1;
/M: SY='G'; M=  0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20,  0,-20,-20,-20,  0,-20,-30,-20,-30,-20;
/M: SY='V'; M=  0,-27,-12,-28,-27, -2,-28,-28, 26,-20,  6,  8,-25,-27,-26,-20, -5,  1, 42,-30,-10,-27;
/I:         I=-6; MI=0; MD=-32; IM=0; DM=-32;
/M: SY='R'; M=-15,-10,-27,-11, -5,-19,-11, -6,-25, 17,-18,-10, -2,-20,  2, 46, -6, -5,-14,-22,-12, -5;
/M: SY='R'; M=-16, -5,-31, -4,  9,-25,-20,  5,-28, 24,-23,-10, -1, -8, 14, 39, -8,-11,-23,-22,-10,  8;
/M: SY='R'; M=-19, -8,-30, -8,  0,-17,-21, 19,-26, 19,-19, -7, -1,-20, 11, 42,-10,-12,-21,-16,  5,  1;
/M: SY='P'; M=-12, -5,-33,  2, 10,-28,-20,-10,-23,  7,-21,-14, -8, 26,  4,  3, -9,-10,-24,-27,-19,  5;
/M: SY='W'; M= -6,-15,-34,-19,-17, -7, -4,-10,-22,-14,-22,-17, -9,-23,-12,-14,-14,-16,-25, 56,  6,-13;
/I:         I=-6; MI=0; MD=-32; IM=0; DM=-32;
/M: SY='G'; M= -4, -3,-30, -1,-14,-30, 52, -5,-39,-17,-29,-19,  3,-19,-15,-17, -1,-19,-30,-23,-23,-15;
/M: SY='R'; M=-12, -7,-29, -7,  1,-22,-12, -9,-25, 28,-18, -8, -3,-16,  4, 32,-11,-11,-18,-20,-11,  1;
/M: SY='W'; M=-20,-37,-40,-40,-30, 33,-23,-27,-13,-23,-10,-13,-33,-30,-27,-20,-33,-23,-20,104, 30,-23;
/M: SY='A'; M= 13, -5,-19, -6, -3,-17, -8,-12,-10, -8,-11, -8, -9,-15, -5,-14,  0, -5, -2,-20, -9, -5;
/M: SY='A'; M= 34, -9,  1,-17, -9,-21, -5,-19,-15, -5,-15,-12, -8,-13, -9,-15,  8,  0, -4,-25,-20, -9;
/M: SY='E'; M=-12,  6,-30, 12, 43,-30,-20, 11,-28, 10,-20,-14,  1, -5, 26,  7, -2,-11,-29,-27,-14, 33;
/M: SY='I'; M= -8,-28,-27,-35,-28, -2,-26,-28, 35,-28, 16, 15,-20,-22,-21,-27,-18,-10, 23,-21, -4,-28;
/M: SY='R'; M=-19,-19,-36,-19,-11, -9,-14, -8,-26, 10,-19,-13,-13,-23, -2, 33,-18,-16,-23, 31,  6, -8;
/M: SY='D'; M=-10, 15,-23, 17, 10,-23,-14,  5,-20, -1,-20,-15, 13,-15,  0, -1,  3, -4,-14,-34,-14,  4;
/I:         I=-3; MD=-17;
/M: SY='P'; M= -8,-16,-30, -9, -1,-23,-17,-17,-14, -3,-22,-14,-16, 57, -8,-12, -8, -8,-18,-24,-22, -8; D=-3;
/I:         I=-3; MD=-17;
/M: SY='A'; M=  1, -6,-16,-13,-11, -4, -5,-11, -2,-10, -7, -4,  1,-14, -9, -7,  0, -3, -3,-17, -8,-11; D=-3;
/I:         I=-3; MI=0; MD=-17; IM=0; DM=-17;
/M: SY='R'; M= -6, -1,-19, -2,  5,-18, -8, -5,-18, 11,-15, -8,  0, -9,  8, 13,  0,  2,-14,-17,-10,  6; D=-3;
/I:         I=-3; DM=-17;
/M: SY='K'; M= -4,  0,-24, -4, -1,-23, -7,  1,-26, 15,-24,-11,  5,-14,  2, 15,  1, -2,-18,-25,-11, -1;
/I:         I=-6; MD=-29;
/M: SY='D'; M= -5,  6,-21,  9,  3,-23,  2,  3,-24,  4,-18,-11,  4,-11,  5,  5, -2, -9,-19,-19,-11,  3; D=-6;
/I:         I=-6; MI=-29; MD=-29; IM=-29; DM=-29;
/M: SY='K'; M=  2, -8,-19, -9, -2,-17,-15,-12,-13, 14,-12, -6, -6,-14, -1, 10, -2, -3, -5,-22,-11, -2; D=-6;
/I:         I=-6; DM=-29;
/M: SY='R'; M=-19, -5,-30, -3,  3,-23,-19,  1,-30, 26,-21,-11,  1,-18, 14, 58, -8,-10,-22,-21,-11,  5;
/M: SY='L'; M= -6,-21,-20,-23,-18, -5,-17,-21,  7,-14, 12,  6,-19,-24,-17, -9,-14, -3, 12,-23, -8,-18;
/M: SY='W'; M=-17,-29,-41,-29,-22,  7,-20,-16,-18,-12,-18,-16,-27,-27,-13, -7,-26,-20,-24, 93, 29,-16;
/M: SY='L'; M=-10,-27,-22,-27,-16,  4,-30,-17, 18,-26, 40, 18,-26,-27,-11,-17,-26,-10,  7,-20, -1,-14;
/M: SY='G'; M= -2,-10,-30,-10,-18,-29, 61,-18,-39,-15,-29,-19,  0,-20,-17,-11, -1,-19,-29,-20,-28,-18;
/M: SY='T'; M= 11, -2,-10,-11, -9,-13,-14,-19,-11,-10,-12,-11, -1,-10, -9,-12, 20, 37, -1,-29,-13, -9;
/M: SY='F'; M=-20,-25,-25,-30,-25, 56,-30, -1,  0,-20,  5,  0,-20,-30,-25,-15,-20,-10, -5, 20, 54,-25;
/M: SY='P'; M=-10,  8,-29, 18, 13,-28,-15,-10,-25, -6,-23,-20, -1, 23, -2,-13,  1, -5,-24,-34,-22,  4;
/M: SY='T'; M=  1,  3,-11, -2, -6,-14,-15,-16,-14, -9,-16,-14,  4,-10, -7,-10, 23, 39, -4,-33,-13, -6;
/M: SY='E'; M= 11, -1,-23,  0, 19,-24,-13,-10,-18, -3,-12,-12, -7,  0,  6,-10,  0, -6,-16,-25,-18, 12;
/M: SY='E'; M= -7,  9,-28, 17, 40,-28,-19,  6,-25,  3,-18,-16,  1, -5, 13, -4, -1,-10,-24,-30,-15, 26;
/M: SY='A'; M= 11, -3,-21, -4,  9,-23, -5, -8,-15, -4,-11, -2, -6,-10,  5,-10,  0, -7,-13,-24,-17,  7;
/M: SY='A'; M= 50,-10,-10,-20,-10,-20,  0,-20,-10,-10,-10,-10,-10,-10,-10,-20, 10,  0,  0,-20,-20,-10;
/M: SY='A'; M= 50,-10,-10,-20,-10,-20,  0,-20,-10,-10,-10,-10,-10,-10,-10,-20, 10,  0,  0,-20,-20,-10;
/M: SY='R'; M=-15, -3,-28,  0,  8,-21,-21,  6,-21, 10,-13, -8, -2,-17,  9, 27, -8,-10,-16,-25, -9,  6;
/M: SY='A'; M= 37, -7,-10,-16, -9,-18, -4,-19,-11,-10,-11,-11, -6,-10, -9,-17, 14, 12, -1,-24,-18, -9;
/M: SY='Y'; M=-20,-17,-29,-18,-17, 26,-28, 31, -6,-12, -3,  0,-14,-28, -9, -9,-18,-12,-13, 17, 64,-17;
/M: SY='D'; M=-12, 40,-28, 53, 16,-37, -9,  0,-34,  0,-27,-25, 19,-11,  4, -9,  2, -8,-27,-37,-19, 10;
/M: SY='V'; M=  3,-15,-16,-16,-15, -6,-22,-19,  6,-12,  6,  2,-17,-22,-16,-14, -8,  0, 14,-23, -6,-16;
/M: SY='A'; M= 42, -8,-12,-17, -7,-21, -2,-18,-13, -5,-13,-11, -8,-10, -7,-15, 11,  1, -3,-22,-19, -7;
/M: SY='A'; M= 24,-14,-15,-20,-11, -9,-11,-19, -6, -4, -5, -5,-13,-15,-12,-12, -1, -3,  2,-18,-12,-11;
/M: SY='L'; M=-10,-27,-24,-30,-21, 16,-27,-17,  8,-21, 22,  7,-24,-27,-19,-13,-23,-11,  2,  4, 11,-20;
/M: SY='K'; M= -6, -3, -4, -4, 12,-26,-20,-10,-28, 18,-22,-14, -4,-14,  4, 15, -6, -9,-19,-27,-17,  7;
/M: SY='F'; M=-16,-28,-23,-32,-24, 36,-31,-12, 12,-25, 22,  9,-23,-29,-24,-19,-23,-10,  4,  1, 28,-24;
/M: SY='R'; M=-18, -4,-34, -1, -5,-18,-10,  8,-31,  3,-23,-15, -3,-20, -1, 18,-14,-17,-26, 10,  0, -4;
/M: SY='G'; M=  4, -8,-27, -8, -7,-28, 35,-14,-32, -9,-24,-16, -2,-16, -5, -7,  1,-14,-24,-21,-24, -6;
/M: SY='R'; M=-10,-16,-26,-14, -7,-16,-13,-12,-14,  0, -9, -7,-10, -2, -5, 15, -7, -7,-11,-25,-14, -9;
/M: SY='D'; M= -4, 15,-23, 19,  4,-25,-10, -6,-25,  3,-19,-16,  9,-14, -1,  4,  2, -5,-18,-31,-16,  1;
/M: SY='A'; M= 15, -8,-20,-12, -8,-21,  3, -4,-20, -8,-18,-12, -3, -6, -7, -7,  6, -1,-13,-25,-16, -9;
/M: SY='V'; M=  2,-20, -7,-23,-15,-12,-24,-21,  5,-13,  3,  2,-19,-14,-11,-15,-10, -6,  9,-26,-12,-14;
/I:         I=-6; MI=0; MD=-29; IM=0; DM=-29;
/M: SY='L'; M= -5,-19,-18,-23,-19, -1,-20,-22, 10,-22, 20,  7,-18,-22,-18,-18,-10,  8,  9,-24, -6,-19;
/M: SY='N'; M= -8, 33,-20, 17,  1,-21, -2,  7,-21,  3,-30,-19, 51,-18,  1,  2, 11,  1,-27,-38,-19,  1;
/M: SY='F'; M=-12,-23,-21,-31,-21, 46,-19,-16, -8,-20,  1, -3,-15,-25,-24,-11,-14,-10, -6,  0, 15,-20;
/M: SY='P'; M=  1, -5,-29,  1, 11,-29,-14,-12,-21, -4,-24,-17, -7, 33,  3,-12,  1, -5,-23,-29,-23,  5;
/I:         E1=0; IE=-105; DE=-105;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 209 in 194 different sequences
Number of true positive hits 209 in 194 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.52 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Feature key [info] DNA_BIND
Feature description [info] AP2/ERF
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
194 sequences

ABI4_ARATH  (A0MES8    ), ABI4_ORYSJ  (C7J2Z1    ), ABR1_ARATH  (Q9FGF8    ), 
AIL1_ARATH  (Q1PFE1    ), AIL5_ARATH  (Q6PQQ3    ), AIL6_ARATH  (Q52QU2    ), 
AIL7_ARATH  (Q6J9N8    ), ANT_ARATH   (Q38914    ), AP2L1_ARATH (Q94AN4    ), 
AP2L3_ARATH (A0JPZ8    ), AP2L4_ARATH (Q8GWK2    ), AP2_ARATH   (P47927    ), 
BBM1_BRANA  (Q8L3U3    ), BBM2_BRANA  (Q8LSN2    ), BBM_ARATH   (Q6PQQ4    ), 
CRF1_ARATH  (O82503    ), CRF2_ARATH  (Q9SUQ2    ), CRF3_ARATH  (Q9FK12    ), 
CRF4_ARATH  (Q9SUE3    ), CRF5_ARATH  (O82339    ), CRF6_ARATH  (Q9M374    ), 
DRE1A_ARATH (Q9M0L0    ), DRE1A_ORYSI (A2Z389    ), DRE1A_ORYSJ (Q64MA1    ), 
DRE1B_ARATH (P93835    ), DRE1B_ORYSI (Q8GUW4    ), DRE1B_ORYSJ (Q3T5N4    ), 
DRE1C_ARATH (Q9SYS6    ), DRE1C_ORYSI (A2Y8S6    ), DRE1C_ORYSJ (Q9LWV3    ), 
DRE1D_ARATH (Q9FJ93    ), DRE1D_ORYSI (Q6REU5    ), DRE1D_ORYSJ (Q6J1A5    ), 
DRE1E_ARATH (Q9SGJ6    ), DRE1E_ORYSI (A2XWL6    ), DRE1E_ORYSJ (Q8H273    ), 
DRE1F_ARATH (Q9LN86    ), DRE1F_ORYSI (A2WZI4    ), DRE1F_ORYSJ (Q8S9Z5    ), 
DRE1G_ORYSI (A2X899    ), DRE1G_ORYSJ (Q6EP77    ), DRE1H_ORYSI (A2Z388    ), 
DRE1H_ORYSJ (Q0J090    ), DRE1I_ORYSJ (Q0J3Y6    ), DRE1J_ORYSI (A2YXQ7    ), 
DRE1J_ORYSJ (Q0J3Y7    ), DRE1_PSEMZ  (P85955    ), DRE2A_ARATH (O82132    ), 
DRE2A_ORYSI (A2WL19    ), DRE2A_ORYSJ (Q0JQF7    ), DRE2B_ARATH (O82133    ), 
DRE2B_ORYSJ (Q5W6R4    ), DRE2C_ARATH (Q8LFR2    ), DRE2C_ORYSJ (Q84ZA1    ), 
DRE2D_ARATH (Q9LQZ2    ), DRE2D_ORYSJ (Q65WX1    ), DRE2E_ARATH (O80917    ), 
DRE2E_ORYSJ (Q10R18    ), DRE2F_ARATH (Q9SVX5    ), DRE2G_ARATH (P61827    ), 
DRE2H_ARATH (Q9SIZ0    ), DREB3_ARATH (Q9LYD3    ), EF100_ARATH (O80337    ), 
EF101_ARATH (O80338    ), EF102_ARATH (O80341    ), EF103_ARATH (Q8VZ91    ), 
EF104_ARATH (Q9FKG1    ), EF105_ARATH (Q8VY90    ), EF106_ARATH (Q9LY05    ), 
EF107_ARATH (Q9FKG2    ), EF109_ARATH (Q9SZ06    ), EF110_ARATH (Q70II3    ), 
EF112_ARATH (P93007    ), EF113_ARATH (Q9LYU3    ), EF114_ARATH (Q9FH54    ), 
EF115_ARATH (Q9LY29    ), EF116_ARATH (Q8GW17    ), EF117_ARATH (Q9M9B2    ), 
EF118_ARATH (Q9CA27    ), EF119_ARATH (Q9LUA2    ), EF120_ARATH (Q9SK67    ), 
EF121_ARATH (Q9FGC9    ), EF122_ARATH (Q38Q40    ), ERF03_ARATH (Q94AW5    ), 
ERF08_ARATH (O22174    ), ERF10_ARATH (Q9FH94    ), ERF11_ARATH (Q9SNE1    ), 
ERF12_ARATH (Q9SFE4    ), ERF13_ARATH (Q9CAP4    ), ERF14_ARATH (Q9LPE8    ), 
ERF15_ARATH (Q6NLD5    ), ERF16_ARATH (Q9C591    ), ERF17_ARATH (Q84QC2    ), 
ERF18_ARATH (Q9S7L5    ), ERF19_ARATH (O80542    ), ERF1_ORYSJ  (Q6K7E6    ), 
ERF1_SOLLC  (Q84XB3    ), ERF1_TOBAC  (Q40476    ), ERF20_ARATH (Q9C9I8    ), 
ERF21_ARATH (Q9C9I2    ), ERF22_ARATH (Q9LQ28    ), ERF23_ARATH (Q1ECI2    ), 
ERF24_ARATH (Q9SJR0    ), ERF25_ARATH (Q9FJ90    ), ERF26_ARATH (Q9CAN9    ), 
ERF27_ARATH (Q38Q39    ), ERF2_NICSY  (Q9LW50    ), ERF2_TOBAC  (Q40479    ), 
ERF34_ARATH (Q8LBQ7    ), ERF35_ARATH (Q9M210    ), ERF36_ARATH (Q9LU18    ), 
ERF37_ARATH (O80654    ), ERF38_ARATH (Q9ZQP3    ), ERF39_ARATH (Q9SUK8    ), 
ERF3_TOBAC  (Q9SXS8    ), ERF42_ARATH (Q52QU1    ), ERF43_ARATH (Q9M080    ), 
ERF4_NICSY  (Q9LW49    ), ERF4_TOBAC  (Q40477    ), ERF53_ARATH (Q9SKT1    ), 
ERF54_ARATH (Q9M0J3    ), ERF55_ARATH (Q9SKW5    ), ERF56_ARATH (Q9SIE4    ), 
ERF57_ARATH (Q9FJQ2    ), ERF5_NICSY  (Q9LW48    ), ERF5_TOBAC  (Q40478    ), 
ERF60_ARATH (O65665    ), ERF61_ARATH (Q9C7W2    ), ERF62_ARATH (Q9SVQ0    ), 
ERF69_ARATH (Q8W4I5    ), ERF70_ARATH (Q9C995    ), ERF71_ARATH (O22259    ), 
ERF73_ARATH (Q8H0T5    ), ERF76_ARATH (Q9C5I3    ), ERF77_ARATH (Q9ZWA2    ), 
ERF78_ARATH (O80340    ), ERF79_ARATH (Q9MAI5    ), ERF80_ARATH (Q9FE67    ), 
ERF81_ARATH (Q94ID6    ), ERF82_ARATH (O80339    ), ERF83_ARATH (Q9LDE4    ), 
ERF84_ARATH (Q9M8M5    ), ERF86_ARATH (Q6J9Q2    ), ERF87_ARATH (Q9FZ90    ), 
ERF88_ARATH (Q3E703    ), ERF91_ARATH (O49515    ), ERF92_ARATH (Q8LDC8    ), 
ERF93_ARATH (Q8VYM0    ), ERF94_ARATH (Q9LND1    ), ERF95_ARATH (Q9LTC6    ), 
ERF96_ARATH (Q9LSX0    ), ERF97_ARATH (P93822    ), ERF98_ARATH (Q9LTC5    ), 
ERF99_ARATH (Q8L9K1    ), ERFL1_ARATH (Q56XP9    ), ESR1_ARATH  (Q9SAD4    ), 
ESR2_ARATH  (Q9FYK5    ), FZP_ORYSJ   (Q8H3Q1    ), LEP_ARATH   (Q9M644    ), 
PLET1_ARATH (Q5YGP8    ), PLET2_ARATH (Q5YGP7    ), PTI5_SOLLC  (O04681    ), 
PTI6_SOLLC  (O04682    ), PZ02_LUPPO  (P16146    ), RA210_ARATH (Q9SW63    ), 
RA211_ARATH (Q6J9S1    ), RA212_ARATH (Q9SSA8    ), RA213_ARATH (Q9LM15    ), 
RAP21_ARATH (Q8LC30    ), RAP22_ARATH (Q9LUM4    ), RAP23_ARATH (P42736    ), 
RAP24_ARATH (Q8H1E4    ), RAP26_ARATH (Q7G1L2    ), RAP27_ARATH (Q9SK03    ), 
RAP29_ARATH (Q8W3M3    ), RAV1_ARATH  (Q9ZWM9    ), RAV2_ARATH  (P82280    ), 
RAVL1_ARATH (Q9C6M5    ), RAVL2_ARATH (Q9C6P5    ), RAVL3_ARATH (Q9C688    ), 
RAVL4_ARATH (Q9LS06    ), SHN2_ARATH  (Q9LFN7    ), SHN3_ARATH  (Q3E958    ), 
SMZ_ARATH   (Q6PV68    ), SNZ_ARATH   (Q6PV67    ), TINY_ARATH  (Q39127    ), 
TOE2_ARATH  (Q9LVG2    ), TOE3_ARATH  (Q9FH95    ), WIN1_ARATH  (Q9XI33    ), 
WRI1_ARATH  (Q6X5Y6    ), Y1407_ORYSJ (Q9AWS7    ), Y1410_ORYSJ (Q9AWS0    ), 
Y1934_ORYSJ (Q8RZX9    ), Y5498_ORYSJ (Q6L4H4    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

AP2A_PLAF7  (Q8I1N6    )

		
PDB
[Detailed view]
3 PDB

1GCC; 2GCC; 3GCC

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission