PROSITE entry PS51090
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General information about the entry
| Entry name [info] | CORTACTIN |
| Accession [info] | PS51090 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAR-2005 CREATED;
01-OCT-2013 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51090 |
| Associated ProRule [info] | PRU00413 |
Name and characterization of the entry
| Description [info] | Cortactin repeat profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=37; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=37; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.8901668; R2=0.0124620; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=611; N_SCORE=8.5; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=443; N_SCORE=6.4; MODE=1; TEXT='RR'; /DEFAULT: M0=-8; D=-20; I=-20; B1=*; E1=*; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='Y'; M= 6,-14,-21,-17,-14, 8,-17, 3, -6,-10, -7, -6,-13,-21, -9,-13, -3, -3, -7, 5, 35,-14; /M: SY='S'; M= 9,-11,-13,-12, -9,-15,-13,-18, -5, -3,-15, -8, -7,-16, -9, -8, 12, 6, 8,-31,-15, -9; /M: SY='R'; M=-14, -3,-27, -5, 1,-21,-20, 12,-27, 22,-21, -8, 2,-15, 7, 32, -5, -2,-19,-23, -5, 1; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='F'; M=-20,-28,-22,-36,-28, 71,-30,-13, 0,-26, 8, 0,-20,-30,-35,-18,-20,-10, -2, 14, 39,-28; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='K'; M=-12, -2,-30, -2, 8,-28,-20, -8,-30, 46,-28,-10, 0,-12, 10, 38,-10,-10,-20,-20,-10, 8; /M: SY='F'; M=-20,-27,-23,-33,-27, 63,-30, -6, 0,-23, 7, 0,-20,-30,-30,-17,-20,-10, -3, 17, 47,-27; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='V'; M= 0,-30,-10,-30,-30, 0,-30,-30, 30,-20, 10, 10,-30,-30,-30,-20,-10, 0, 50,-30,-10,-30; /M: SY='E'; M=-10, 5,-30, 10, 41,-35,-20, 5,-25, 10,-20,-10, 0, -5, 39, 5, 0,-10,-30,-25,-15, 40; /M: SY='R'; M= -6, -4,-22, -7, 1,-21,-17, -6,-16, 12,-17, 0, -1,-13, 12, 13, 4, 6,-13,-25,-10, 6; /M: SY='D'; M=-18, 43,-30, 62, 27,-38,-12, 0,-38, 2,-28,-28, 17, -8, 3, -8, 0,-10,-30,-38,-20, 15; /M: SY='R'; M=-18, -8,-30, -8, 2,-22,-20, -2,-30, 34,-22,-10, 0,-18, 10, 62,-10,-10,-20,-20,-10, 2; /M: SY='W'; M= -3,-17,-27,-21, -8,-14,-19,-10, -5, -7, -7, 7,-17,-19, 11, -8,-12,-12, -8, 14, -1, 2; /M: SY='D'; M=-20, 50,-30, 70, 20,-40,-10, 0,-40, 0,-30,-30, 20,-10, 0,-10, 0,-10,-30,-40,-20, 10; /M: SY='K'; M= -7, 0,-27, 0, 10,-30,-17, -7,-27, 35,-29,-10, 2,-10, 15, 21, 0, -5,-20,-23,-12, 12; /M: SY='A'; M= 21, -7, 13,-13, -9,-20, -5,-17,-18,-14,-21,-16, -3,-15, -9,-17, 20, 7, -6,-34,-22, -9; /M: SY='A'; M= 50,-10,-10,-20,-10,-20, 0,-20,-10,-10,-10,-10,-10,-10,-10,-20, 10, 0, 0,-20,-20,-10; /M: SY='V'; M= -4,-30,-14,-30,-26, 4,-30,-26, 26,-24, 26, 14,-30,-30,-26,-20,-18, -4, 34,-26, -6,-26; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='F'; M=-20,-24,-29,-29,-22, 39,-26, 8, -9,-20, -3, -4,-18,-28,-21,-14,-22,-15,-13, 32, 39,-21; /I: E1=0; IE=-105; DE=-105; /M: SY='D'; M=-17, 37,-30, 54, 33,-37,-13, 0,-37, 3,-27,-27, 14, -7, 6, -7, 0,-10,-30,-37,-20, 19; /M: SY='Y'; M=-20,-16,-30,-16,-16, 21,-28, 34, -5,-10, -4, 0,-15,-28, -6, -8,-18,-12,-14, 19, 69,-16; /M: SY='Q'; M=-10, 0,-30, 0, 15,-35,-20, 0,-25, 30,-25, -5, 0,-10, 35, 20, -5,-10,-25,-20,-10, 25; /M: SY='G'; M= -2, -1,-26, 2, 11,-28, 27,-11,-33, -8,-27,-20, 2,-11, -3,-11, 7, -9,-26,-27,-25, 4; /M: SY='K'; M=-10, 3,-30, 7, 27,-30,-20, -7,-30, 36,-27,-13, 0, -7, 13, 20, -7,-10,-23,-23,-13, 20; /M: SY='L'; M= -5,-20,-15,-23,-18, 2,-27,-21, 11,-22, 24, 8,-20,-23,-18,-17,-10, 12, 12,-25, -5,-18; /M: SY='E'; M= 3, 3,-23, 6, 31,-28,-13, -3,-23, 3,-20,-15, 0, -5, 19, -3, 9, -3,-21,-28,-18, 25; /M: SY='K'; M=-10, -5,-28, -5, 5,-23,-22,-12,-21, 36,-16, -5, -5,-14, 5, 21,-14,-10,-15,-20, -8, 5; /M: SY='H'; M=-20, 0,-30, 0, 0,-20,-20,100,-30,-10,-20, 0, 10,-20, 10, 0,-10,-20,-30,-30, 20, 0; /M: SY='E'; M= -1, 1, 2, 2, 25,-24,-19,-11,-25, -3,-17,-17, -5,-10, 3, -9, 2, -1,-18,-32,-20, 14; /M: SY='S'; M= 10, 0,-10, 0, 0,-20, 0,-10,-20,-10,-30,-20, 10,-10, 0,-10, 40, 20,-10,-40,-20, 0; /M: SY='Q'; M=-10, 0,-30, 0, 20,-40,-20, 10,-20, 10,-20, 0, 0,-10, 60, 10, 0,-10,-30,-20,-10, 40; /M: SY='K'; M=-10, -8,-26, -8, 2,-24,-22, -8,-18, 27,-19, -5, -5,-16, 11, 26, -8, -8, -9,-22,-10, 6; /M: SY='D'; M=-20, 50,-30, 70, 20,-40,-10, 0,-40, 0,-30,-30, 20,-10, 0,-10, 0,-10,-30,-40,-20, 10; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 35 in 6 different sequences |
| Number of true positive hits | 35 in 6 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 7 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | PS_Langendijk_Genevaux |
| Feature key [info] | REPEAT |
| Feature description [info] | Cortactin |
| Version [info] | 4 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
6 sequences
HCLS1_HUMAN (P14317), HCLS1_MOUSE (P49710), SRC8_CHICK (Q01406), SRC8_HUMAN (Q14247), SRC8_MOUSE (Q60598), SRC8_RAT(Q66HL2)» more
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| PDB [Detailed view] |
1 PDB
8P94 |