Due to maintenance work, this service will be unavailable from
Mon Nov 11 17:30 until
Tue Nov 12 09:00
CET.
Apologies for the inconvenience.
PROSITE entry PS51090
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | CORTACTIN |
| Accession [info] | PS51090 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAR-2005 CREATED;
01-OCT-2013 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51090 |
| Associated ProRule [info] | PRU00413 |
Name and characterization of the entry
| Description [info] | Cortactin repeat profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=37; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=37; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.8901668; R2=0.0124620; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=611; N_SCORE=8.5; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=443; N_SCORE=6.4; MODE=1; TEXT='RR'; /DEFAULT: M0=-8; D=-20; I=-20; B1=*; E1=*; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='Y'; M= 6,-14,-21,-17,-14, 8,-17, 3, -6,-10, -7, -6,-13,-21, -9,-13, -3, -3, -7, 5, 35,-14; /M: SY='S'; M= 9,-11,-13,-12, -9,-15,-13,-18, -5, -3,-15, -8, -7,-16, -9, -8, 12, 6, 8,-31,-15, -9; /M: SY='R'; M=-14, -3,-27, -5, 1,-21,-20, 12,-27, 22,-21, -8, 2,-15, 7, 32, -5, -2,-19,-23, -5, 1; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='F'; M=-20,-28,-22,-36,-28, 71,-30,-13, 0,-26, 8, 0,-20,-30,-35,-18,-20,-10, -2, 14, 39,-28; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='K'; M=-12, -2,-30, -2, 8,-28,-20, -8,-30, 46,-28,-10, 0,-12, 10, 38,-10,-10,-20,-20,-10, 8; /M: SY='F'; M=-20,-27,-23,-33,-27, 63,-30, -6, 0,-23, 7, 0,-20,-30,-30,-17,-20,-10, -3, 17, 47,-27; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='V'; M= 0,-30,-10,-30,-30, 0,-30,-30, 30,-20, 10, 10,-30,-30,-30,-20,-10, 0, 50,-30,-10,-30; /M: SY='E'; M=-10, 5,-30, 10, 41,-35,-20, 5,-25, 10,-20,-10, 0, -5, 39, 5, 0,-10,-30,-25,-15, 40; /M: SY='R'; M= -6, -4,-22, -7, 1,-21,-17, -6,-16, 12,-17, 0, -1,-13, 12, 13, 4, 6,-13,-25,-10, 6; /M: SY='D'; M=-18, 43,-30, 62, 27,-38,-12, 0,-38, 2,-28,-28, 17, -8, 3, -8, 0,-10,-30,-38,-20, 15; /M: SY='R'; M=-18, -8,-30, -8, 2,-22,-20, -2,-30, 34,-22,-10, 0,-18, 10, 62,-10,-10,-20,-20,-10, 2; /M: SY='W'; M= -3,-17,-27,-21, -8,-14,-19,-10, -5, -7, -7, 7,-17,-19, 11, -8,-12,-12, -8, 14, -1, 2; /M: SY='D'; M=-20, 50,-30, 70, 20,-40,-10, 0,-40, 0,-30,-30, 20,-10, 0,-10, 0,-10,-30,-40,-20, 10; /M: SY='K'; M= -7, 0,-27, 0, 10,-30,-17, -7,-27, 35,-29,-10, 2,-10, 15, 21, 0, -5,-20,-23,-12, 12; /M: SY='A'; M= 21, -7, 13,-13, -9,-20, -5,-17,-18,-14,-21,-16, -3,-15, -9,-17, 20, 7, -6,-34,-22, -9; /M: SY='A'; M= 50,-10,-10,-20,-10,-20, 0,-20,-10,-10,-10,-10,-10,-10,-10,-20, 10, 0, 0,-20,-20,-10; /M: SY='V'; M= -4,-30,-14,-30,-26, 4,-30,-26, 26,-24, 26, 14,-30,-30,-26,-20,-18, -4, 34,-26, -6,-26; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='F'; M=-20,-24,-29,-29,-22, 39,-26, 8, -9,-20, -3, -4,-18,-28,-21,-14,-22,-15,-13, 32, 39,-21; /I: E1=0; IE=-105; DE=-105; /M: SY='D'; M=-17, 37,-30, 54, 33,-37,-13, 0,-37, 3,-27,-27, 14, -7, 6, -7, 0,-10,-30,-37,-20, 19; /M: SY='Y'; M=-20,-16,-30,-16,-16, 21,-28, 34, -5,-10, -4, 0,-15,-28, -6, -8,-18,-12,-14, 19, 69,-16; /M: SY='Q'; M=-10, 0,-30, 0, 15,-35,-20, 0,-25, 30,-25, -5, 0,-10, 35, 20, -5,-10,-25,-20,-10, 25; /M: SY='G'; M= -2, -1,-26, 2, 11,-28, 27,-11,-33, -8,-27,-20, 2,-11, -3,-11, 7, -9,-26,-27,-25, 4; /M: SY='K'; M=-10, 3,-30, 7, 27,-30,-20, -7,-30, 36,-27,-13, 0, -7, 13, 20, -7,-10,-23,-23,-13, 20; /M: SY='L'; M= -5,-20,-15,-23,-18, 2,-27,-21, 11,-22, 24, 8,-20,-23,-18,-17,-10, 12, 12,-25, -5,-18; /M: SY='E'; M= 3, 3,-23, 6, 31,-28,-13, -3,-23, 3,-20,-15, 0, -5, 19, -3, 9, -3,-21,-28,-18, 25; /M: SY='K'; M=-10, -5,-28, -5, 5,-23,-22,-12,-21, 36,-16, -5, -5,-14, 5, 21,-14,-10,-15,-20, -8, 5; /M: SY='H'; M=-20, 0,-30, 0, 0,-20,-20,100,-30,-10,-20, 0, 10,-20, 10, 0,-10,-20,-30,-30, 20, 0; /M: SY='E'; M= -1, 1, 2, 2, 25,-24,-19,-11,-25, -3,-17,-17, -5,-10, 3, -9, 2, -1,-18,-32,-20, 14; /M: SY='S'; M= 10, 0,-10, 0, 0,-20, 0,-10,-20,-10,-30,-20, 10,-10, 0,-10, 40, 20,-10,-40,-20, 0; /M: SY='Q'; M=-10, 0,-30, 0, 20,-40,-20, 10,-20, 10,-20, 0, 0,-10, 60, 10, 0,-10,-30,-20,-10, 40; /M: SY='K'; M=-10, -8,-26, -8, 2,-24,-22, -8,-18, 27,-19, -5, -5,-16, 11, 26, -8, -8, -9,-22,-10, 6; /M: SY='D'; M=-20, 50,-30, 70, 20,-40,-10, 0,-40, 0,-30,-30, 20,-10, 0,-10, 0,-10,-30,-40,-20, 10; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 35 in 6 different sequences |
| Number of true positive hits | 35 in 6 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 7 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | PS_Langendijk_Genevaux |
| Feature key [info] | REPEAT |
| Feature description [info] | Cortactin |
| Version [info] | 4 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
6 sequences
HCLS1_HUMAN (P14317), HCLS1_MOUSE (P49710), SRC8_CHICK (Q01406), SRC8_HUMAN (Q14247), SRC8_MOUSE (Q60598), SRC8_RAT(Q66HL2)» more
|
| PDB [Detailed view] |
1 PDB
8P94 |