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Entry: PS51266

General information about the entry

Entry name [info] ZF_CHY
Accession [info] PS51266
Entry type [info] MATRIX
Date [info] 01-NOV-2006 CREATED; 10-MAY-2017 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC51266
Associated ProRule [info] PRU00601

Name and characterization of the entry

Description [info] Zinc finger CHY-type profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=68;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=63;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4746594; R2=0.0057403; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=10424.9931641; R2=3.1954856; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=1172; H_SCORE=14170; N_SCORE=9.2; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=702; H_SCORE=12668; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-17; D=-80; I=-80; B1=-400; E1=-400; MI=-255; MD=-255; IM=-255; DM=-255;
...
                A   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y
/I:         B1=0; BI=-255; BD=-255;
/M: SY='P'; M=-31,-49, 14,  7,  3, -7,-10,  4,-14,-15,  8,-29, 67, 18, -9,-17,-14,-10,-44,-32;
/M: SY='E'; M= -5,-43, -8, 47,-36, 26, 14,-12, -8, 15,-25,-11, -2,-21,-30,-18,-16,-11,-47,-34;
/M: SY='P'; M=-18,-46,-25, 26,-40,-37,-30,-21, 13,-11,-28, -5, 60, 26, -6, 12,-24,  8,-46,-21;
/M: SY='M'; M= -3,-42,  6,  2,-24, 17,-27,-33, 27, -2, 35, 12,-14, 21,  9, -1,-13,-33,-45,-32;
/M: SY='N'; M=-30,  0, 19, 13,-38,-19, 18, 20, 11,-21,-26, 28,  1, 24, 14,-16,-26,  5,-51,-32;
/M: SY='G'; M=-30,-42,-41,-41, 38, 40, 11,-22,-34, 21, 11,-32,-45,-34,  5,-30, -9, -7,-28, 36;
/M: SY='G'; M= 22,-40,-32,-39,-48, 77,-38,-50,-35,-48,-39,-20,-35,-33,-42, -1, 11,-41,-44,-44;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/M: SY='E'; M= -4,-46,-17, 50,-49,-36,-26,-45, 43,-44,-36, -8, 27, 21, 18,  6,-15,-32,-46,-38;
/M: SY='H'; M=-38,-50,-22,-22,-36,-40,132,-55,-27,-37,-22,-11,-38,-16,-21,-27,-36,-54,-72, -5;
/M: SY='Y'; M=-40,-50,-40,-43, 33,-47, -7,-24,-35,-21,-18,-41,-52,-31,-32,-35,-34,-30,  4,114;
/M: SY='K'; M=-20,-47, -3, -6,-43,-39,-26,-43, 61,-41, -6,-21,-12, 16, 53, -8,-17,-27, 36,-31;
/M: SY='R'; M=-34,-49,-28,-17,-45,-42,  6,-49, 40,-44,-32,  1,-40, 10, 85,-26, -7,-43,-45,-31;
/M: SY='N'; M= -7,-38,-19,-25,-45, 12,-21,-46, -3,-48,-37, 62,-38,-17, 41, 46,-17,-41,-52,-37;
/M: SY='C'; M=  2,118,-43,-42,  6,-42, 52,-31,-40,-30,-29,-32,-52,-42,-42,-30,-29,  9,-54, -4;
/M: SY='K'; M=-33, -2,-31,-18, -6,-43, -9,-36, 65,  3, -2,-24,-39, -4, 54,-30,-29,-35,-40,-28;
/M: SY='W'; M=-35,-44,-56,-48, 20,-53,-47, 46,-46, 45, -6,-51,-49,-43,-46,-44,-32, 14, 90,-14;
/I:         I=-21; MI=0; MD=-65; IM=0; DM=-65;
/M: SY='R'; M=-44,-59,-43,-18,-50,-57,-38,-31, 28,-25,-38,-38,-53,-25, 66,-42,-41, -2,-56,-43; D=-21;
/I:         I=-21; DM=-65;
/M: SY='F'; M= 47,-45,-54,-48, 56,-41,-49,-38,-48,-35,-37,-46,-53,-49,-50,-31, -7,-33,-39,-23; D=-21;
/I:         I=-21; DM=-65;
/M: SY='P'; M=  5,-50,-31,  4,-48,-34,-33,-36,-26,-26,-32,-34, 91, 36,-34,  1,-25,-17,-47,-43;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/I:         I=-22; MI=0; MD=-71; IM=0; DM=-71;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/M: SY='N'; M= -9,-41, 35,-13,-47, 44,  3,-48,  1,-37,-39, 64,-37,-23,-29,  4,-23,-45,-54,-39;
/M: SY='K'; M=-30,-46, -9, 35,-46,-39,  0,-46, 63,-25,-33,-20,-33, 18, 37,  2,-26,-42,-44,-33;
/M: SY='W'; M= -8,-44,-56,-47, 18,-49,-50, 41,-44, 31,-11,-50,-47,-42,-45,-41,-32, 25,102,-14;
/M: SY='Y'; M=-41,-45,-47,-46, 78,-49,-18,-19,-40,-15,-18,-43,-53,-41,-37,-38,-34,-11, -2, 91;
/M: SY='P'; M=-17,-43, 18,-24,-43,-12,-10,-31,-16,-38, -4,-24, 74,-30,-36,  0, 49, -4,-53,-39;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/M: SY='R'; M=-36,-52, 38,-16,-45,-43,  3,-19, -1,-42,-34,-21, 15,-14, 84,-29,-32,-41,-49,-32;
/M: SY='H'; M=-18,-42,-35,-14, 43,-45, 76, 16,-13, 16,-16,-28,-42,-29, -5,-30, 13,-21,-37,  6;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/M: SY='H'; M=-38,-50,-22,-22,-36,-40,132,-55,-27,-37,-22,-11,-38,-16,-21,-27,-36,-54,-72, -5;
/M: SY='D'; M=-23,-46, 91, -5,-50,-29,-19,-51,-22,-51,-47, 52,-37,-22,-30,-21,-23,-49,-65,-13;
/M: SY='E'; M=  8,-44, 33, 63,-45,-22,-24,-42, 10,-12,-34, 21,-31,  3,-22,-22,-13,-38,-50,-38;
/I:         I=-13; MI=0; MD=-42; IM=0; DM=-42;
/M: SY='N'; M=  8,-40, 16, 12,-36, -2, 12,  4,  2,-31,-28, 42,-39,-25,-29, -5,-23, 26,-51, -9; D=-13;
/I:         I=-13; DM=-42;
/M: SY='E'; M=-16, 15, 29, 55,-22,-35,  1,-42, -6,-30,-36,-20,  2, 27,-24, 29, -8,-26,-50,-35;
/M: SY='D'; M=-14,-44, 65, -4,-48,  6,-23,-46,  3,-45, -1, 33,-37,-20, 34,-12,  7,-42,-56,-37;
/M: SY='H'; M=-38,-50,-22,-22,-36,-40,132,-55,-27,-37,-22,-11,-38,-16,-21,-27,-36,-54,-72, -5;
/M: SY='H'; M= -7,-41, 22, 35,-16,-37, 41,-33, -7,-13,-29, -7,-34, 16,  5,  6, 31, -7,-51,-29;
/M: SY='C'; M= -4, 46,-50,-44, 30,-48,-36, 28,-42, 41, 44,-43,-48,-13,-42,-37,-29,  2,-36,  5;
/M: SY='D'; M=-32, -6, 62, 34,-47,-36,-26, -5,-22,-40,-36, 26, 43, 15,-30,-25,-25, -8,-57,-39;
/M: SY='R'; M=-36,-49,-34,-24,-34,-46, 29,-15,  0, -2,  3,-27,-44,-13, 88,-32,-34,-34,-43, -3;
/M: SY='H'; M= 31,-42,-29, -5, 20,-34, 59,-39, 31,-35,-28,-24, 11, 18,  7,-22,-16,-35,-38,  6;
/M: SY='K'; M= 17,-41, 19, 24,-45,-32,-24,-41, 34,-24,-32, 34,-34, 29, 11,-18, 12,-36,-49,-36;
/M: SY='V'; M=-25,-37,-39,-34, -8,-46,-40, 18,-10,-11,-18,-31,-40,-31, 33,-24, 48, 49,-50,-29;
/M: SY='K'; M=-17,-42,-26, 21,-38,-39,-28,  0, 44,-27, 43,-24,-33, 29,  2,  1, 18,  5,-46,-31;
/I:         I=-22; MD=-71;
/M: SY='E'; M=-43,-60,-25, 41,-58,-49, 21,-60, 13,-46,-47, 26,-45, 31,-16,-25,-40,-58, 28,-43; D=-22;
/I:         I=-22; MI=-71; MD=-71; IM=-71; DM=-71;
/M: SY='M'; M=-39,-50,-65,-58,-33,-63,-51, 16,-53, -2, 75,-56,-57,-49,-53,-51,-37, 41,-61,-37; D=-22;
/I:         I=-22; DM=-71;
/M: SY='I'; M=-31,-41,-49,-41,  5,-53,-41, 53,-24, 34, 35,-43,-45,  7,-21,-39,-28, 29,-41,-22;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/M: SY='M'; M=-13,-38,-38,-39,-30, 44,-32, -5,-35,  6, 75,-26,-37,-30,-38, 20, 15,-22,-44,-30;
/M: SY='Y'; M= -9,-41,-35, -6, 14,-43,  0,  4, -8, 27,-15, -5,-43,-16, -1,-11,  8,  2,-29, 49;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/M: SY='N'; M= -1,-41, 29,  4, -7, 22,-24,-37,-25, -9, -7, 37,-38,  3,-16, 21,-12,-36,-42, 18;
/M: SY='T'; M=-28, -3,-28,-23,-36,-40, 31,-20, 43, -5,  4,  2,-35,-20, 27,-19, 54,-28,-49,-29;
/M: SY='E'; M= -4,-45,-19, 60,-32,-45,-30, 13,-21,  3,-23,-33,  8,  1, -1,-29,-18, 13,-44, -2;
/M: SY='Q'; M=-27,-51,-25, -6,  5,-12,-18,-42,-11,-37,-26,-20,-36,105,-12, -5,-30,-44,-38,-25;
/M: SY='P'; M= -5,-48, 22, 13,-16,-17, 12,-43, 13,-45,-37,-24, 73,-22,  7,  2,  2,-41,-48,-37;
/M: SY='V'; M= 36,-38,  6,-33,-26,-38,-40, 26,-14,-19,-19,-35, -5,-35,-37,-26,-22, 49,-43, 16;
/M: SY='Q'; M= 11, 12, 12,-19,-48, 28,-27,-44,  2,-44,-35,  9,-35, 53,-16, 27, 12,-38,-48,-37;
/I:         I=-21; MI=0; MD=-65; IM=0; DM=-65;
/M: SY='Q'; M=  8,-46, 20, 12,-11,-34,  2,-43, 29,-40,-31,-19,  3, 76,-13,-15, -8,-40,-43,-30;
/M: SY='T'; M=-21,-41, -5, 17,-11,-40,  9,  7,-24,-26, -4, 13, -3,  7,  3, -4, 30, 26,-44, 14;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/M: SY='I'; M=-27,-44,  9, 25,-32,-41,-33, 37,  5,-11,  7,-27, 11, -5, -6, 19, -4,  5,-46,-15;
/I:         I=-21; MI=0; MD=-65; IM=0; DM=-65;
/M: SY='H'; M=-30,-46,  2, -7,-16, 13, 44,-50,  1,-47,-39, 39,-42, 13,-28, 30,-26,-47,-48, 14; D=-21;
/I:         I=-21; DM=-65;
/M: SY='C'; M=-30,142,-50,-50,-40,-45,-50,-47,-45,-38,-38,-36,-61,-53,-52,-32,-30,-34,-70,-51;
/M: SY='G'; M=-21,-43,-14,-15,-47, 65, -4,-49, -5,-27,-36, 25,-36, 32,-30, 17,-27,-46,-46,-39;
/M: SY='V'; M=  2,-39,-31, -1,-31,-14,-33,  1, 21,-24,  7,  9,-39,  3,  0,-12,  8, 42,-46,  1;
/I:         E1=0; IE=-255; DE=-255;
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 15 in 15 different sequences
Number of true positive hits 15 in 15 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] N_Hulo
Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Feature key [info] ZN_FING
Feature description [info] CHY-type
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
15 sequences

BTSL1_ARATH (F4IDY5    ), BTSL2_ARATH (F4HVS0    ), BTS_ARATH   (Q8LPQ5    ), 
HOT13_KLULA (Q6CIK2    ), HOT13_YEAST (P36078    ), MIEL1_ARATH (Q8VZK0    ), 
SRFP1_ORYSJ (Q10LI1    ), YEMC_SCHPO  (O14033    ), YERG_SCHPO  (O14099    ), 
YGU5_SCHPO  (O43034    ), YNS9_SCHPO  (O60140    ), ZFP34_ARATH (Q9FFB6    ), 
ZFP34_ORYSJ (Q5JL96    ), ZN363_HUMAN (Q96PM5    ), ZN363_MOUSE (Q9CR50    )
» more

PDB
[Detailed view]
2 PDB

2DKT; 2K2C

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