 |
|
| Entry: PS51450 |
| General information about the entry | |
|---|---|
| Entry name | LRR |
| Accession number | PS51450 |
| Entry type | MATRIX |
| Date | DEC-2009 (CREATED); DEC-2009 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC51450 |
| Associated ProRule | PRU00785 |
| Name and characterization of the entry | |
| Description | Leucine-rich repeat profile. |
| Matrix / Profile | /GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=22;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=22;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.4886985; R2=0.0077007; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=1041; N_SCORE=7.0; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=781; N_SCORE=4.5; MODE=1; TEXT='R?';
/DEFAULT: M0=-18; D=-80; I=-80; B0=-55; E0=-55; B1=-200; E1=-200; MI=-55; MD=-55; IM=-55; DM=-55;
A C D E F G H I K L M N P Q R S T V W Y
/I: B1=0; BI=-55; BD=-55;
/M: SY='N'; M= -22, -20, 2, 8, -34, -14, 24, -49, 30, -42, -29, 61, -32, 13, 3, 31, -2, -41, -47, -27;
/I: B1=-50; BI=-105; BD=-105;
/M: SY='L'; M= -63, -59, -88, -69, -39, -97, -81, 13, -88, 119, -20, -79, -92, -91, -90, -87, -57, -24, -79, -46;
/I: B1=-140; BI=-105; BD=-105;
/M: SY='R'; M= -31, -12, -4, 40, -49, -39, 2, -37, 34, -37, -31, -5, -34, 36, 43, -11, 21, -21, -53, -36;
/M: SY='T'; M= -20, -3, -7, 20, -8, -47, 29, -1, 8, -34, -26, 6, -47, -2, -15, 12, 30, 12, 10, 25;
/M: SY='L'; M= -74, -83, -89, -74, -10, -98, -82, 25, -88, 116, -12, -90, -92, -92, -80, -87, -63, -14, -79, -48;
/M: SY='D'; M= -42, -26, 68, -9, -9, -37, 8, -32, -28, -35, -34, 60, -48, -21, -25, 12, -14, -39, 38, 27;
/M: SY='L'; M= -18, -60, -88, -83, 8, -94, -82, 28, -80, 105, 21, -88, -91, -91, -89, -75, -66, 8, -80, -59;
/M: SY='S'; M= 4, -39, 14, -6, -32, -5, 21, -39, -25, -55, -45, 11, -34, 12, -1, 66, -4, -29, -59, -18;
/M: SY='H'; M= -33, 2, 27, -4, -7, 22, 61, -57, -19, -39, -43, 56, -47, 5, -7, 15, -38, -53, -23, 19;
/M: SY='N'; M= -63, 7, -41, -43, -70, -45, -48, -78, -38, -86, -81, 172, -74, -31, -65, -43, -35, -63,-100, -60;
/M: SY='N'; M= -26, 5, -4, 2, -32, -15, 28, -44, 30, -14, -16, 38, -3, 37, 36, -7, -29, -46, -39, -6;
/M: SY='I'; M= -78, -71, -86, -89, 2, -98, -87, 110, -88, 71, -16, -84, -86, -85, -74, -79, -77, 9, -60, -60;
/M: SY='T'; M= -11, -22, -3, 18, -26, -21, -8, -35, 24, -31, -35, -5, -20, 10, 15, 33, 40, -27, -31, -22;
/M: SY='D'; M= -48, -9, 57, 33, -47, -33, 29, -71, 35, -75, -47, 34, -54, 14, 6, 56, 9, -31, -85, -37;
/M: SY='I'; M= -67, -62, -83, -69, 14, -87, -78, 95, -73, 66, 6, -68, -50, -73, -91, -70, -43, 27, 8, -53;
/M: SY='P'; M= 0, -10, 18, 41, -60, -5, -12, -39, -7, -46, -34, -8, 60, -5, -17, 26, 0, -41, -39, -43;
/M: SY='N'; M= -15, -25, 37, 20, -42, 23, -5, -41, -7, -39, -40, 46, 22, -8, -27, 17, -7, -20, -58, -34;
/M: SY='L'; M= -47, -49, -16, -5, 14, -40, -34, 26, -34, 73, -19, -26, -40, -37, -63, -9, -41, 5, -39, 11;
/M: SY='E'; M= 8, -13, 13, 28, -23, -21, -12, -2, -11, -9, -20, 9, 6, 10, -8, 23, 3, -17, -40, -22;
/M: SY='F'; M= -9, 0, 3, 9, 27, -6, 24, -36, 11, -8, -29, 19, 1, -10, 0, 14, 1, -23, -32, -10;
/I: E1=-90; IE=-55; DE=-55;
/M: SY='L'; M= -27, 33, -49, -14, -16, -63, -3, -26, -27, 79, 15, -22, -51, 6, -25, -7, -23, -21, 2, -4;
/I: E1=-30; IE=-55; DE=-55;
/M: SY='P'; M= -13, 4, -15, -5, -28, -13, -11, -23, 23, 7, -4, 3, 26, 8, 4, 4, 16, -9, -27, -8;
/I: E1=0; IE=-55; DE=-55;
|
| Numerical results | |
|
|
| Comments | |
|
|
| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:A2GL_HUMAN (P02750), ALP21_SCHPO (Q10303), ALS_HUMAN (P35858), ALS_PAPHA (O02833), AMGO1_HUMAN (Q86WK6), AMGO1_MOUSE (Q80ZD8), AMGO1_RAT (Q80ZD7), AMGO2_HUMAN (Q86SJ2), AMGO2_MOUSE (Q80ZD9), AMGO2_PONAB (Q5R7M3), AMGO2_RAT (Q7TNJ4), AMGO3_HUMAN (Q86WK7), AMGO3_MOUSE (Q8C2S7), AN321_ORYSJ (Q6YSF3), AN322_ORYSJ (Q7Y180), AN32A_BOVIN (P51122), AN32A_CANFA (Q8HY67), AN32A_DANRE (Q7ZUP0), AN32A_DROME (Q9V895), AN32A_DROPS (Q28XE2), AN32A_HUMAN (P39687), AN32A_MOUSE (O35381), AN32A_RAT (P49911), AN32A_XENLA (Q6PAF6), AN32B_BOVIN (Q3SZC6), AN32B_CHICK (Q5ZMN0), AN32B_HUMAN (Q92688), AN32B_MOUSE (Q9EST5), AN32B_RAT (Q9EST6), AN32B_SHEEP (Q6A1I3), AN32B_XENLA (Q8AVC1), AN32B_XENTR (Q6P1U7), AN32C_HUMAN (O43423), AN32C_MOUSE (Q64G17), AN32D_HUMAN (O95626), AN32E_CHICK (Q5F4A3), AN32E_DANRE (Q6NUW5), AN32E_HUMAN (Q9BTT0), AN32E_MOUSE (P97822), AN32E_RAT (Q5XIE0), AN32E_XENLA (Q7ZY40), AN32_ARATH (Q9SCQ7), AN32_SCHMA (Q86QS6), ASPN_BOVIN (Q3ZBN5), ASPN_HUMAN (Q9BXN1), ASPN_MOUSE (Q99MQ4), BAME2_ARATH (Q9M2Z1), BAME3_ARATH (O65440), BRI1_SOLPE (Q8L899), BRL1_ARATH (Q9ZWC8), BRL2_ARATH (Q9ZPS9), C2TA_HUMAN (P33076), CC135_CHLRE (A8JAM0), CCR4_ASHGO (Q75BI3), CCR4_ASPCL (A1CIJ6), CCR4_ASPFU (Q4WQG5), CCR4_ASPNC (A2Q9L0), CCR4_ASPOR (Q2UUI3), CCR4_ASPTN (Q0CT27), CCR4_CANAL (Q5A761), CCR4_CANGA (Q6FRT2), CCR4_COCIM (Q1EA11), CCR4_DEBHA (Q6BMM5), CCR4_EMENI (Q5B778), CCR4_ENCCU (Q8SU52), CCR4_ENTBH (B7XK66), CCR4_KLULA (Q6CJU4), CCR4_NEOFI (A1CW67), CCR4_NEUCR (Q9C2R2), CCR4_NOSCE (C4V7I7), CCR4_PHANO (Q0U7W4), CCR4_SCHPO (O74874), CCR4_USTMA (Q4P9T3), CCR4_YARLI (Q6CEJ6), CCR4_YEAST (P31384), CD14_BOVIN (Q95122), CD14_HUMAN (P08571), CD14_MOUSE (P10810), CD14_RAT (Q63691), CD180_HUMAN (Q99467), CDC11_SCHPO (O74473), CEP72_DANRE (Q501X2), CEP72_HUMAN (Q9P209), CEP72_MOUSE (Q9D3R3), CEP97_HUMAN (Q8IW35), CEP97_MOUSE (Q9CZ62), CEP97_XENLA (Q6GPJ8), CHADL_HUMAN (Q6NUI6), CHAD_BOVIN (Q27972), CHAD_HUMAN (O15335), CHAD_MOUSE (O55226), CHAD_RAT (O70210), CHAO_DROME (P12024), CHAO_TRICA (P82963), CJ011_HUMAN (Q9H2I8), CJ011_MOUSE (Q9D9B4), CLV2_ARATH (O80809), CN6LA_XENLA (Q6IR85), CN6LB_XENLA (Q5XH73), CNO6L_DANRE (A2BHJ4), CNO6L_HUMAN (Q96LI5), CNO6L_MOUSE (Q8VEG6), CNOT6_HUMAN (Q9ULM6), CNOT6_MOUSE (Q8K3P5), CNOT6_RAT (Q6AXU9), CNOT6_XENLA (Q5BJ41), CNTRL_HUMAN (Q7Z7A1), CNTRL_MOUSE (A2AL36), CONN_DROME (Q01819), CPN2_HUMAN (P22792), CPN2_MOUSE (Q9DBB9), CU002_HUMAN (O43822), CU002_MOUSE (Q8C6G1), CYAA_LACKL (P23466), CYAA_NEUCR (Q01631), CYAA_PODAS (Q01513), CYAA_SCHPO (P14605), CYAA_USTMA (P49606), CYAA_YEAST (P08678), DAAF1_AEDAE (Q16RY9), DAAF1_ANOGA (Q7PK92), DAAF1_BOVIN (Q3SYS4), DAAF1_CHLRE (Q09JZ4), DAAF1_DANRE (Q7ZV84), DAAF1_DROER (B3NLX1), DAAF1_DROME (Q8INT5), DAAF1_DROPE (B4GT53), DAAF1_DROPS (Q29KL8), DAAF1_DROYA (B4P6W7), DAAF1_HUMAN (Q8NEP3), DAAF1_MOUSE (Q9D2H9), DAAF1_PERCA (B6D5P6), DAAF1_PERLE (B6D5P3), DAAF1_PERPL (B6D5P1), DAAF1_RAT (Q6AYH9), DIA2_YEAST (Q08496), DNAL1_BOVIN (Q2KID4), DNAL1_CHLRE (Q9XHH2), DNAL1_CIOIN (Q8T888), DNAL1_DANRE (Q6DHB1), DNAL1_HUMAN (Q4LDG9), DNAL1_MOUSE (Q05A62), DNAL1_XENLA (Q641R9), DNAL1_XENTR (Q28G94), DRKD_DICDI (Q54TM7), DRL27_ARATH (Q9T048), DRL37_ARATH (Q9LVT4), ECM2_BOVIN (Q3MHH9), ECM2_HUMAN (O94769), ECM2_MOUSE (Q5FW85), ELFN1_HUMAN (P0C7U0), ELFN1_MOUSE (Q8C8T7), EPYC_BOVIN (P79119), EPYC_CHICK (Q90944), EPYC_HUMAN (Q99645), EPYC_MOUSE (P70186), ERECT_ARATH (Q42371), ERL2_ARATH (Q6XAT2), ESC1_YEAST (Q03661), FBX39_HUMAN (Q8N4B4), FEA2_MAIZE (Q940E8), FLII_CAEEL (P34268), FLII_DROME (Q24020), FLII_HUMAN (Q13045), FLII_MOUSE (Q9JJ28), FLRT1_HUMAN (Q9NZU1), FLRT3_HUMAN (Q9NZU0), FLRT3_PONAB (Q5R6T0), FLRT3_RAT (B1H234), FMOD_BOVIN (P13605), FMOD_CHICK (P51887), FMOD_HUMAN (Q06828), FMOD_MOUSE (P50608), FMOD_PIG (Q9TTB4), FMOD_RABIT (O46378), FMOD_RAT (P50609), FSHR_EQUAS (Q95179), FSHR_HORSE (P47799), FSHR_RAT (P20395), FUMC_SULSO (P39461), GBPC_DICDI (Q8MVR1), GEFL_DICDI (B0M0P8), GEFN_DICDI (Q8IS12), GEFV_DICDI (Q55FD8), GLHR_ANTEL (P35409), GP124_HUMAN (Q96PE1), GP124_MOUSE (Q91ZV8), GP125_HUMAN (Q8IWK6), GP125_MOUSE (Q7TT36), GP1BA_CANFA (Q28256), GP1BA_HUMAN (P07359), GP1BA_MOUSE (O35930), GPV_HUMAN (P40197), GPV_MOUSE (O08742), GPV_RAT (O08770), GR101_LYMST (P46023), GSO2_ARATH (Q9FIZ3), H2AY_TETTS (Q5Y2C3), HFW1_DROPS (P84329), IGS10_MOUSE (Q3V1M1), IMK3_ARATH (C0LGP9), INLA_LISM4 (G2K3G6), INLA_LISMF (Q723K6), INLA_LISMO (P0DJM0), INLB_LISMO (P25147), INLI_LISMF (Q723X5), INLI_LISMO (Q8YA32), IPA3_SHIFL (Q83RJ4), IPA4_SHIFL (P18009), IPA7_SHIFL (P18014), ISLR2_HUMAN (Q6UXK2), ISLR2_MOUSE (Q5RKR3), ISLR_BOVIN (A4IFA6), ISLR_HUMAN (O14498), ISLR_MOUSE (Q6GU68), ISLR_PONAB (Q5NVQ6), KERA_BOVIN (O62702), KERA_CHICK (O42235), KERA_COTJA (Q9DE66), KERA_HUMAN (O60938), KERA_MOUSE (O35367), L37A1_HUMAN (A6NMS7), L37A2_HUMAN (A6NM11), L37A3_HUMAN (O60309), LAP1_CAEEL (O61967), LAP1_DROME (Q9V780), LAP2_HUMAN (Q96RT1), LAP2_MOUSE (Q80TH2), LAP4_DROME (Q7KRY7), LFN1L_DANRE (A8WGA3), LGI3_HUMAN (Q8N145), LGI3_MACFA (Q4R4H3), LGI3_MOUSE (Q8K406), LGI3_PANTR (Q1EGL0), LGI4_HUMAN (Q8N135), LGR4_HUMAN (Q9BXB1), LGR4_MOUSE (A2ARI4), LGR4_RAT (Q9Z2H4), LGR5_HUMAN (O75473), LGR5_MOUSE (Q9Z1P4), LGR6_HUMAN (Q9HBX8), LGR6_MOUSE (Q3UVD5), LIGO1_CHICK (Q50L44), LIGO1_HUMAN (Q96FE5), LIGO1_MACFA (Q9N008), LIGO1_MOUSE (Q9D1T0), LIGO1_PONAB (Q5RDJ4), LIGO1_XENTR (A4IIW9), LIGO2_HUMAN (Q7L985), LIGO2_MOUSE (Q3URE9), LIGO3_HUMAN (P0C6S8), LIGO3_MOUSE (Q6GQU6), LIGO4_HUMAN (Q6UY18), LIGO4_MOUSE (Q149C3), LLR1_HUMAN (Q96L50), LR10B_HUMAN (A6NIK2), LR37B_HUMAN (Q96QE4), LRC10_BOVIN (Q24K06), LRC10_HUMAN (Q5BKY1), LRC10_MOUSE (Q8K3W2), LRC14_XENLA (Q640Z9), LRC15_HUMAN (Q8TF66), LRC15_MOUSE (Q80X72), LRC15_RAT (Q8R5M3), LRC17_HUMAN (Q8N6Y2), LRC17_MOUSE (Q9CXD9), LRC18_HUMAN (Q8N456), LRC18_MOUSE (Q9CQ07), LRC18_RAT (Q66HD6), LRC23_BOVIN (Q32KP2), LRC23_HUMAN (Q53EV4), LRC23_MOUSE (O35125), LRC23_XENTR (Q28CU0), LRC24_HUMAN (Q50LG9), LRC24_MOUSE (Q8BHA1), LRC26_MOUSE (Q91W20), LRC26_RAT (Q6P7C4), LRC27_HUMAN (Q9C0I9), LRC27_MOUSE (Q80YS5), LRC28_BOVIN (Q32KX5), LRC28_MOUSE (Q3TX51), LRC28_XENTR (Q6GLE8), LRC30_HUMAN (A6NM36), LRC30_MOUSE (Q3UV48), LRC32_HUMAN (Q14392), LRC32_PONAB (Q5RF01), LRC33_BOVIN (Q3ZBI5), LRC33_DANRE (Q6AXL3), LRC33_HUMAN (Q86YC3), LRC33_MOUSE (Q8BMT4), LRC33_RAT (Q5BK65), LRC36_HUMAN (Q1X8D7), LRC36_MOUSE (Q3V0M2), LRC38_HUMAN (Q5VT99), LRC39_BOVIN (Q3ZC49), LRC39_HUMAN (Q96DD0), LRC39_MOUSE (Q8BGI7), LRC3B_BOVIN (A6H789), LRC3B_DANRE (A3KNN3), LRC3B_HUMAN (Q96PB8), LRC3B_MOUSE (Q8VCH9), LRC40_CHICK (Q5ZLN0), LRC40_DANRE (Q7SXW3), LRC40_HUMAN (Q9H9A6), LRC40_MACFA (Q4R3P6), LRC40_MOUSE (Q9CRC8), LRC40_PONAB (Q5RFE9), LRC40_XENLA (Q6GPJ5), LRC40_XENTR (Q5M8G4), LRC42_DANRE (Q6P5J6), LRC43_HUMAN (Q8N309), LRC43_MACFA (Q95JT3), LRC46_HUMAN (Q96FV0), LRC46_MACFA (Q4R747), LRC46_MOUSE (Q9DAP0), LRC46_RAT (Q6AXZ2), LRC47_HUMAN (Q8N1G4), LRC47_MOUSE (Q505F5), LRC48_HUMAN (Q9H069), LRC48_MACFA (Q4R6X9), LRC48_MOUSE (Q9D5E4), LRC48_RAT (Q5XI54), LRC49_HUMAN (Q8IUZ0), LRC49_MOUSE (Q91YK0), LRC4B_HUMAN (Q9NT99), LRC4B_MOUSE (P0C192), LRC4B_RAT (P0CC10), LRC4C_HUMAN (Q9HCJ2), LRC4C_MOUSE (Q8C031), LRC51_BOVIN (Q5EAD8), LRC51_HUMAN (Q96E66), LRC51_MACMU (B6CZ45), LRC51_MOUSE (Q9DAK8), LRC51_PANTR (B6CZ40), LRC51_PROCO (B6CZ54), LRC51_RAT (B6CZ61), LRC52_HUMAN (Q8N7C0), LRC52_MOUSE (Q5M8M9), LRC53_HUMAN (A6NM62), LRC53_MACFA (Q9BGY6), LRC55_HUMAN (Q6ZSA7), LRC55_MOUSE (Q3UY51), LRC55_RAT (Q4KLL3), LRC56_HUMAN (Q8IYG6), LRC56_MOUSE (Q8K375), LRC56_RAT (Q4V8C9), LRC57_DANRE (Q6DHL5), LRC57_HUMAN (Q8N9N7), LRC57_MOUSE (Q9D1G5), LRC57_RAT (Q5FVI3), LRC57_XENLA (Q6INV3), LRC58_HUMAN (Q96CX6), LRC58_MOUSE (Q3UGP9), LRC58_XENLA (Q32NT4), LRC58_XENTR (A4IHG1), LRC59_BOVIN (Q5E9X4), LRC59_DANRE (Q6NWG1), LRC59_HUMAN (Q96AG4), LRC59_MOUSE (Q922Q8), LRC59_RAT (Q5RJR8), LRC59_XENLA (Q8AVS8), LRC61_BOVIN (Q2T9T5), LRC61_HUMAN (Q9BV99), LRC61_MOUSE (Q8R2R5), LRC63_HUMAN (Q05C16), LRC63_MOUSE (A6H694), LRC63_RAT (Q4V8G0), LRC66_HUMAN (Q68CR7), LRC66_MOUSE (Q8K0B3), LRC69_HUMAN (Q6ZNQ3), LRC69_MOUSE (Q9D9Q0), LRC69_XENLA (Q3KQF4), LRC72_BOVIN (A6H759), LRC72_HUMAN (A6NJI9), LRC8A_HUMAN (Q8IWT6), LRC8A_MOUSE (Q80WG5), LRC8A_RAT (Q4V8I7), LRC8B_HUMAN (Q6P9F7), LRC8B_MOUSE (Q5DU41), LRC8C_BOVIN (A5PK13), LRC8C_HUMAN (Q8TDW0), LRC8C_MOUSE (Q8R502), LRC8C_RAT (Q498T9), LRC8D_HUMAN (Q7L1W4), LRC8D_MOUSE (Q8BGR2), LRC8D_RAT (Q5U308), LRC8E_HUMAN (Q6NSJ5), LRC8E_MOUSE (Q66JT1), LRC8E_RAT (Q3KRC6), LRC8E_XENLA (Q6NU09), LRC8E_XENTR (Q68F79), LRCC1_HUMAN (Q9C099), LRCC1_MOUSE (Q69ZB0), LRCC1_XENLA (Q6NRC9), LRCH1_HUMAN (Q9Y2L9), LRCH1_MOUSE (P62046), LRCH2_HUMAN (Q5VUJ6), LRCH2_MOUSE (Q3UMG5), LRCH4_HUMAN (O75427), LRCH4_MOUSE (Q921G6), LRFN1_DANRE (Q6PGX3), LRFN1_HUMAN (Q9P244), LRFN1_MOUSE (Q2WF71), LRFN1_RAT (P0C7J6), LRFN2_HUMAN (Q9ULH4), LRFN2_MACFA (Q9BE71), LRFN2_MOUSE (Q80TG9), LRFN2_RAT (Q460M5), LRFN5_HUMAN (Q96NI6), LRFN5_MOUSE (Q8BXA0), LRFN5_RAT (D4A1J9), LRGUK_HUMAN (Q96M69), LRGUK_MOUSE (Q9D5S7), LRIG1_HUMAN (Q96JA1), LRIG1_MOUSE (P70193), LRIG2_HUMAN (O94898), LRIG2_MOUSE (Q52KR2), LRIG3_HUMAN (Q6UXM1), LRIG3_MOUSE (Q6P1C6), LRIQ1_HUMAN (Q96JM4), LRIQ1_MOUSE (Q0P5X1), LRIQ3_HUMAN (A6PVS8), LRIQ3_MOUSE (Q14DL3), LRIQ3_RAT (Q6AYL8), LRIQ4_HUMAN (A6NIV6), LRIQ4_MOUSE (A6H6A4), LRIT1_HUMAN (Q9P2V4), LRIT1_MOUSE (Q8K099), LRIT1_RAT (Q9JMH2), LRIT2_DANRE (Q504C1), LRIT2_HUMAN (A6NDA9), LRIT2_MOUSE (Q6PFC5), LRIT3_HUMAN (Q3SXY7), LRK1_CAEEL (Q9TZM3), LRR3C_HUMAN (A6NJW4), LRR70_HUMAN (Q7Z2Q7), LRRA_DICDI (Q54AX5), LRRC1_HUMAN (Q9BTT6), LRRC1_MOUSE (Q80VQ1), LRRC2_HUMAN (Q9BYS8), LRRC2_MOUSE (Q8VDB8), LRRC3_BOVIN (A6H793), LRRC3_DANRE (A8WHP9), LRRC3_HUMAN (Q9BY71), LRRC3_MOUSE (P59034), LRRC3_RAT (P59035), LRRC4_HUMAN (Q9HBW1), LRRC4_MOUSE (Q99PH1), LRRC4_RAT (Q45R42), LRRC7_BOVIN (F1MCA7), LRRC7_HUMAN (Q96NW7), LRRC7_MOUSE (Q80TE7), LRRC7_RAT (P70587), LRRC9_HUMAN (Q6ZRR7), LRRC9_MOUSE (Q8CDN9), LRRC9_XENTR (A0JM56), LRRD1_HUMAN (A4D1F6), LRRD1_MACFA (Q4R6F0), LRRD1_MOUSE (Q8C0R9), LRRK1_HUMAN (Q38SD2), LRRK1_MOUSE (Q3UHC2), LRRK2_HUMAN (Q5S007), LRRK2_MOUSE (Q5S006), LRRN1_BOVIN (A0N0X6), LRRN1_HUMAN (Q6UXK5), LRRN1_MOUSE (Q61809), LRRN1_RAT (Q32Q07), LRRN2_HUMAN (O75325), LRRN3_HUMAN (Q9H3W5), LRRN3_MOUSE (Q8CBC6), LRRN3_PONAB (Q5R482), LRRN3_RAT (Q9ESY6), LRRN4_MOUSE (P59383), LRRT1_BOVIN (A1A4H9), LRRT1_HUMAN (Q86UE6), LRRT1_MOUSE (Q8K377), LRRT1_PONAB (Q5R6B1), LRRT1_RAT (D4A6D8), LRRT2_HUMAN (O43300), LRRT2_MOUSE (Q8BGA3), LRRT2_RAT (D4A7P2), LRRT3_HUMAN (Q86VH5), LRRT3_MACFA (Q9BGP6), LRRT3_MOUSE (Q8BZ81), LRRT3_RAT (D3ZAL8), LRRT4_HUMAN (Q86VH4), LRRT4_MOUSE (Q80XG9), LRRT4_RAT (B4F7C5), LRSM1_HUMAN (Q6UWE0), LRSM1_MOUSE (Q80ZI6), LRTM1_HUMAN (Q9HBL6), LRTM1_MOUSE (Q8BXQ3), LRTM2_HUMAN (Q8N967), LRTM2_MOUSE (Q8BGX3), LRWD1_DANRE (B0R160), LRWD1_HUMAN (Q9UFC0), LRWD1_MOUSE (Q8BUI3), LRWD1_XENLA (Q6GM71), LRWD1_XENTR (B0JZ65), LUM_BOVIN (Q05443), LUM_CHICK (P51890), LUM_COTJA (Q9DE67), LUM_HUMAN (P51884), LUM_MOUSE (P51885), LUM_RABIT (O46379), LUM_RAT (P51886), L_MABVA (Q1PD54), MEE39_ARATH (C0LGP2), MEX67_CANAL (P84149), MEX67_SCHPO (Q9Y8G3), MEX67_YEAST (Q99257), MFHA1_HUMAN (Q9Y4C4), MFHA1_MOUSE (Q3V1N1), MFHA1_XENTR (A4IIK1), MIME_BOVIN (P19879), MIME_CHICK (Q9W6H0), MIME_COTJA (Q9DE65), MIME_HUMAN (P20774), MIME_MOUSE (Q62000), MIME_PONAB (Q5RBL2), MIME_RABIT (Q8MJF1), MLP1_YEAST (Q02455), MPL1_DICDI (Q55CS7), MPL2_DICDI (Q55CS8), MPL3_DICDI (Q54Y32), MUTS_ALISL (B6ENH6), NAL12_HUMAN (P59046), NAL12_MOUSE (E9Q5R7), NAL4B_MOUSE (Q8C6J9), NAL4C_MOUSE (Q3TKR3), NAL4E_MOUSE (Q66X19), NALP1_HUMAN (Q9C000), NALP3_MOUSE (Q8R4B8), NISCH_HUMAN (Q9Y2I1), NISCH_MOUSE (Q80TM9), NISCH_RAT (Q4G017), NLRC5_HUMAN (Q86WI3), NOD2_BOVIN (Q6E804), NOD2_HUMAN (Q9HC29), NOD2_HYLLA (Q53B88), NOD2_PANTR (Q53B87), NTRK2_CHICK (Q91987), NTRK3_CHICK (Q91044), NTRK3_HUMAN (Q16288), NTRK3_MACFA (Q5IFJ9), NTRK3_MOUSE (Q6VNS1), NTRK3_PANTR (Q5IS37), NTRK3_PIG (P24786), NTRK3_RAT (Q03351), NTRK3_SAIBB (Q5IS82), NUD1_YEAST (P32336), NXF1_BOVIN (Q1RMS5), NXF1_COTJA (P58797), NXF1_DROME (Q9U1H9), NXF1_HUMAN (Q9UBU9), NXF1_MOUSE (Q99JX7), NXF1_PONAB (Q5R752), NXF1_RAT (O88984), NXF2_DROME (Q9VV73), NXF2_HUMAN (Q9GZY0), NXF5_HUMAN (Q9H1B4), OMD_BOVIN (O77742), OMD_HUMAN (Q99983), OMD_MOUSE (O35103), OMD_RAT (Q9Z1S7), OMGP_HUMAN (P23515), OMGP_MOUSE (Q63912), OPT_BOVIN (P58874), OPT_CANFA (P83286), OPT_HUMAN (Q9UBM4), OPT_MOUSE (Q920A0), PATS1_DICDI (Q55E58), PEPR1_ARATH (Q9SSL9), PEPR2_ARATH (Q9FZ59), PGIP_VITVI (A7PW81), PGS1_BOVIN (P21809), PGS1_CANFA (O02678), PGS1_HORSE (O46403), PGS1_HUMAN (P21810), PGS1_MOUSE (P28653), PGS1_PIG (Q9GKQ6), PGS1_RABIT (O46377), PGS1_RAT (P47853), PGS1_SHEEP (O46390), PGS2_BOVIN (P21793), PGS2_CANFA (Q29393), PGS2_CHICK (P28675), PGS2_COTJA (Q9DE68), PGS2_HORSE (O46542), PGS2_HUMAN (P07585), PGS2_MOUSE (P28654), PGS2_PANTR (Q5R1V9), PGS2_PIG (Q9XSD9), PGS2_RABIT (Q28888), PGS2_RAT (Q01129), PGS2_SHEEP (Q9TTE2), PGTA_HUMAN (Q92696), PGTA_PONAB (Q5NVK5), PHLP1_HUMAN (O60346), PHLP1_MOUSE (Q8CHE4), PHLP1_RAT (Q9WTR8), PHLP2_HUMAN (Q6ZVD8), PHLP2_MOUSE (Q8BXA7), PHLPP_CAEEL (Q09564), PHLPP_DROME (Q9VJ07), PIDD_HUMAN (Q9HB75), PIDD_MOUSE (Q9ERV7), PKD1_HUMAN (P98161), PKD1_MOUSE (O08852), PLIB_GLOBS (O93233), PODN_HUMAN (Q7Z5L7), PODN_MOUSE (Q7TQ62), PONL1_HUMAN (Q6PEZ8), PONL1_MOUSE (Q6P3Y9), PP1R7_BOVIN (Q3T0W4), PP1R7_DANRE (Q32PL1), PP1R7_DICDI (Q54Q39), PP1R7_HUMAN (Q15435), PP1R7_MOUSE (Q3UM45), PP1R7_PONAB (Q5RFS7), PP1R7_RAT (Q5HZV9), PP1R7_XENTR (Q6DIQ3), PPR29_HUMAN (Q5R3F8), PPR29_MOUSE (Q68FM6), PPR37_BOVIN (A7Z026), PPR37_DANRE (Q1L994), PPR37_HUMAN (O75864), PPR37_MOUSE (Q8BKR5), PPR37_RAT (B2RYF1), PPR42_DANRE (Q6GQN5), PPR42_HUMAN (Q7Z4L9), PPR42_MACFA (Q4R803), PPR42_MOUSE (Q8R1Z4), PPR42_XENLA (Q5PPX0), PRELP_BOVIN (Q9GKN8), PRELP_HUMAN (P51888), PRELP_MOUSE (Q9JK53), PRELP_RAT (Q9EQP5), PSKR1_ARATH (Q9ZVR7), PSKR1_DAUCA (Q8LPB4), PSKR2_ARATH (Q9FN37), PSYR1_ARATH (Q9C7S5), PXDNL_HUMAN (A1KZ92), PXDN_CAEBR (A8WQH2), PXDN_HUMAN (Q92626), PXDN_MOUSE (Q3UQ28), PXDN_XENTR (A4IGL7), QKGA_DICDI (Q8SSS9), R13L2_ARATH (Q9STE5), R4RL1_HUMAN (Q86UN2), R4RL1_MOUSE (Q8K0S5), R4RL1_RAT (Q80WD0), RCH1_ARATH (C0LGV1), RGA1_SOLBU (Q7XA42), RGA3_SOLBU (Q7XA40), RGA4_SOLBU (Q7XA39), RIMM_DEHE1 (Q3Z8Z0), RINI_PIG (P10775), RINI_RAT (P29315), RLK5_ARATH (P47735), RLP2_ARATH (Q9SHI3), ROC10_DICDI (Q6XHA6), ROC11_DICDI (Q6XHA5), ROCO4_DICDI (Q6XHB2), ROCO5_DICDI (Q1ZXD6), ROCO6_DICDI (Q54WS5), ROCO8_DICDI (Q54M77), ROCO9_DICDI (Q6XHA7), RPK1_IPONI (P93194), RSU1_BOVIN (Q5E9C0), RSU1_HUMAN (Q15404), RSU1_MOUSE (Q01730), RTN4R_HUMAN (Q9BZR6), RTN4R_MACFA (Q9N0E3), RTN4R_MOUSE (Q99PI8), RTN4R_RAT (Q99M75), RU2A_ASPFU (Q4WV66), RU2A_CAEEL (Q9BLB6), RU2A_CANAL (Q5A449), RU2A_CANGA (Q6FV04), RU2A_DROME (Q9V4Q8), RU2A_EMENI (Q5BGW9), RU2A_HUMAN (P09661), RU2A_MACFA (Q4R8Y8), RU2A_MOUSE (P57784), RU2A_NEUCR (Q7S9P4), RU2A_SCHPO (Q9USX8), RU2A_USTMA (Q4P5F9), RU2A_YARLI (Q6C417), RU2A_YEAST (Q08963), RXFP1_HUMAN (Q9HBX9), RXFP1_MOUSE (Q6R6I7), RXFP1_PONAB (Q5R5V8), RXFP1_RAT (Q6R6I6), RXFP2_CANFA (Q5XM32), RXFP2_HUMAN (Q8WXD0), RXFP2_MOUSE (Q91ZZ5), S11IP_CHICK (Q5F479), S11IP_HUMAN (Q8N1F8), S11IP_XENLA (Q6IRN0), S11IP_XENTR (Q6P4K6), SBIR1_ARATH (Q9SKB2), SCRIB_DANRE (Q4H4B6), SCRIB_HUMAN (Q14160), SCRIB_MOUSE (Q80U72), SDS22_SCHPO (P22194), SDS22_YEAST (P36047), SHOC2_BOVIN (A6QLV3), SHOC2_CAEBR (A8XWW4), SHOC2_CAEEL (Q22875), SHOC2_CHICK (Q5F4C4), SHOC2_DANRE (Q1L8Y7), SHOC2_HUMAN (Q9UQ13), SHOC2_MOUSE (O88520), SHOC2_NEMVE (A7SFP1), SHOC2_PONAB (Q5RAV5), SHOC2_RAT (Q6AYI5), SHOC2_XENLA (Q8AVI4), SLIK1_HUMAN (Q96PX8), SLIK1_MOUSE (Q810C1), SLIK1_PONAB (Q5RAC4), SLIK2_HUMAN (Q9H156), SLIK2_MOUSE (Q810C0), SLIK4_HUMAN (Q8IW52), SLIK4_MOUSE (Q810B8), SLIK5_HUMAN (O94991), SLIK5_MOUSE (Q810B7), SLIK6_HUMAN (Q9H5Y7), SLIK6_MOUSE (Q8C110), SLIT1_CAEEL (G5EFX6), SLIT1_HUMAN (O75093), SLIT1_MOUSE (Q80TR4), SLIT1_RAT (O88279), SLIT2_HUMAN (O94813), SLIT2_MOUSE (Q9R1B9), SLIT2_RAT (Q9WVC1), SLIT3_HUMAN (O75094), SLIT3_MOUSE (Q9WVB4), SLIT3_RAT (O88280), SLIT_DROME (P24014), SLRA_DICDI (Q54T74), SLRP_SALT1 (D0ZRB2), SLRP_SALTY (Q8ZQQ2), SOG2_SCHPO (O94294), SOG2_YEAST (Q08817), SRF2_ARATH (Q9FG24), SRF7_ARATH (Q9LUL4), SSPH1_SALT1 (D0ZVG2), SSPH2_SALT1 (D0ZPH9), SSPH2_SALTY (P0CE12), SUR8_CULQU (B0W6M9), SUR8_DROAN (B3LWU3), SUR8_DROER (B3P3E8), SUR8_DROGR (B4JTV9), SUR8_DROME (Q9VEK6), SUR8_DROPS (B5DX45), SUR8_DROSE (B4IBI9), SUR8_DROSI (B4QVR7), SUR8_DROVI (B4LXW1), SUR8_DROWI (B4N9T4), SUR8_DROYA (B4PU77), TBCE_BOVIN (Q32KS0), TBCE_DICDI (Q55CN0), TILB_BOVIN (Q1RMR5), TILB_DANRE (B3DH20), TILB_DROME (Q9VR52), TILB_HUMAN (Q86X45), TILB_MACFA (Q4R3F0), TILB_MOUSE (O88978), TILB_TRYBB (Q9NJE9), TILB_XENTR (Q28FY0), TLR10_BOVIN (Q6GV17), TLR10_HUMAN (Q9BXR5), TLR11_MOUSE (Q6R5P0), TLR12_MOUSE (Q6QNU9), TLR13_MOUSE (Q6R5N8), TLR1_HUMAN (Q15399), TLR1_MOUSE (Q9EPQ1), TLR21_CHICK (Q9DD78), TLR22_CHICK (Q9DGB6), TLR2_BISBI (B2LT61), TLR2_BOSIN (B5T267), TLR2_BOSTR (Q2V897), TLR2_BOVIN (Q95LA9), TLR2_BUBBU (Q2PZH4), TLR2_CANFA (Q689D1), TLR2_CAPHI (Q0GC71), TLR2_CAPIB (B2LT62), TLR2_CRIGR (Q9R1F8), TLR2_GIRCA (B2LT64), TLR2_GORGO (B3Y615), TLR2_HORSE (Q6T752), TLR2_HUMAN (O60603), TLR2_MACFA (Q95M53), TLR2_MACMU (B3Y618), TLR2_MOUSE (Q9QUN7), TLR2_PANPA (B3Y614), TLR2_PANTR (B3Y613), TLR2_SHEEP (B2LT65), TLR3_BOSTR (Q0PV50), TLR3_BOVIN (Q5TJ59), TLR3_HUMAN (O15455), TLR3_MOUSE (Q99MB1), TLR4_BOSTR (Q2V898), TLR4_BOVIN (Q9GL65), TLR4_CRIGR (Q9WV82), TLR4_FELCA (P58727), TLR4_GORGO (Q8SPE8), TLR4_HORSE (Q9MYW3), TLR4_HUMAN (O00206), TLR4_PANPA (Q9TTN0), TLR4_PAPAN (Q9TSP2), TLR4_PIG (Q68Y56), TLR4_PONPY (Q8SPE9), TLR4_RAT (Q9QX05), TLR5_HUMAN (O60602), TLR5_MOUSE (Q9JLF7), TLR6_BOVIN (Q704V6), TLR6_DASNO (Q0ZUL9), TLR6_HUMAN (Q9Y2C9), TLR6_MOUSE (Q9EPW9), TLR7_HUMAN (Q9NYK1), TLR7_MOUSE (P58681), TLR8_HUMAN (Q9NR97), TLR8_MOUSE (P58682), TLR9_BOVIN (Q5I2M5), TLR9_CANFA (Q5I2M8), TLR9_FELCA (Q5I2M7), TLR9_HUMAN (Q9NR96), TLR9_MOUSE (Q9EQU3), TLR9_PIG (Q5I2M3), TLR9_SHEEP (Q5I2M4), TMK1_ARATH (P43298), TMVRN_NICGU (Q40392), TOLL_DROME (P08953), TPBG_HUMAN (Q13641), TPBG_MACFA (Q4R8Y9), TPBG_MOUSE (Q9Z0L0), TPBG_RAT (Q5PQV5), TRIL_HUMAN (Q7L0X0), TRIL_MOUSE (Q9DBY4), TRIL_RAT (Q496Z2), TRK1_LYMST (O76997), TSK_CHICK (Q65Z91), TSK_DANRE (Q58A48), TSK_HUMAN (Q8WUA8), TSK_MOUSE (Q8CBR6), TSK_RAT (Q6QMY6), TSK_XENTR (Q5M7S9), VASN_HUMAN (Q6EMK4), VASN_MOUSE (Q9CZT5), VASN_XENTR (Q6DF55), XRRA1_BOVIN (Q7PCK7), XRRA1_HUMAN (Q6P2D8), XRRA1_MACFA (Q95LL2), XRRA1_MOUSE (Q3U3V8), Y0124_DICDI (Q54XI9), Y0138_DICDI (Q54XZ5), Y1061_ARATH (Q9LPT1), Y1341_ARATH (C0LGF5), Y1571_ARATH (Q9LP24), Y1680_ARATH (Q9M9C5), Y1743_ARATH (C0LGJ1), Y1848_ARATH (Q9LP77), Y2010_ARATH (P0C895), Y2144_ARATH (Q9ZQQ7), Y2165_ARATH (C0LGK4), Y2239_ARATH (Q0WVM4), Y2241_ARATH (Q9ZUI0), Y2242_ARATH (C0LGK9), Y2278_ARATH (C0LGJ9), Y3359_ARATH (Q9LFG1), Y3804_ARATH (Q9LRT1), Y4052_ARATH (Q8VYT3), Y4374_ARATH (Q9SUQ3), Y4885_ARATH (Q8VZG8), Y5371_ARATH (Q8W4S5), Y5487_ARATH (C0LGV0), Y5815_ARATH (Q9LVN2), Y5977_ARATH (Q9LT96), Y6386_DICDI (Q54NK3), YDDK_ECOLI (P76123), YFT6_SCHPO (Q9UUG2), YKW2_YEAST (P35995), YLS5_CAEEL (P34390), YNZ9_CAEEL (P45969), YOD3_CAEEL (P34595), YOPM_YERPE (P17778), YR380_MIMIV (Q5UQX3), YV012_MOUSE (Q14BP6), ZY11B_HUMAN (Q9C0D3), ZY11B_MOUSE (Q3UFS0)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): ATP5S_BOVIN (P22027), ATP5S_HUMAN (Q99766), ATP5S_MACFA (Q4R5S4), ATP5S_MOUSE (Q9CRA7), ATP5S_PONAB (Q5R9E6), ATP5S_RAT (Q5XIM4), BAME1_ARATH (O49545), CD180_MOUSE (Q62192), CLMP1_CRYNB (P0CP19), CLMP1_CRYNJ (P0CP18), FBXL3_HUMAN (Q9UKT7), FBXL3_MOUSE (Q8C4V4), FBXL7_DANRE (A1A5X2), FBXL7_HUMAN (Q9UJT9), FBXL7_MOUSE (Q5BJ29), FDL44_ARATH (Q9LJF9), FXL15_BOVIN (E1BNS0), FXL15_CANFA (E2RKN7), FXL15_DANRE (Q6NW95), FXL15_DICLA (E6ZHJ8), FXL15_HUMAN (Q9H469), FXL15_MOUSE (Q91W61), FXL15_RAT (D4ABB4), FXL15_SALSA (B5X441), FXL15_XENLA (Q7SZ73), FXL15_XENTR (Q5XGC0), FXL21_BOVIN (Q3ZBA7), FXL21_HUMAN (Q9UKT6), FXL21_MOUSE (Q8BFZ4), FXL21_SHEEP (B3FL73), IPA9_SHIB3 (B2TT54), IPA9_SHIBS (Q31SH3), IPA9_SHIDS (Q326Z6), IPA9_SHIF2 (D2AJU0), IPA9_SHIFL (Q8VSC3), IPA9_SHISS (Q3YTH5), LR14B_HUMAN (A6NHZ5), LRX1_ARATH (O65375), LRX2_ARATH (O48809), LRX3_ARATH (Q9T0K5), LRX4_ARATH (Q9LHF1), LRX5_ARATH (Q9SN46), LRX6_ARATH (Q9LUI1), LRX7_ARATH (Q4PSE6), LUCB_OPLGR (Q9GV46), MICAL_DROME (Q86BA1), NIK1_ARATH (Q9LFS4), NIK2_ARATH (Q8RY65), NIK3_ARATH (Q93ZS4), NLRC4_BOVIN (F1MHT9), NLRC4_HUMAN (Q9NPP4), NLRC4_MOUSE (Q3UP24), NLRC4_RAT (F1M649), NLRC4_XENTR (F6R2G2), NLRC5_ICTPU (C6FG12), NLRC5_MOUSE (C3VPR6), PLRX1_ARATH (Q9LJ64), PLRX2_ARATH (Q9XIB6), PLRX3_ARATH (Q9XIL9), PLRX4_ARATH (O81765), TONSL_BOVIN (Q0P5G1), TONSL_DANRE (A9JR78), TONSL_DROME (Q9VSA4), TONSL_HUMAN (Q96HA7), TONSL_MOUSE (Q6NZL6), TONSL_RAT (D4A615), TONS_ARATH (Q6Q4D0), TPBGL_HUMAN (P0DKB5), TPBGL_MOUSE (Q8C013), UNC22_CAEEL (Q23551), Y1723_ARATH (Q9SHI2), Y1931_DICDI (Q54T82), Y2182_ARATH (O22938), Y2923_ARATH (O64556), Y5410_ARATH (Q9FL63), Y5524_ARATH (C0LGX1), Y6689_DICDI (Q551A3), Y8328_DICDI (Q55GD2)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
|
| PDB [Detailed view] |
1A9N; 1D0B; 1DFJ; 1DS9; 1FO1; 1FT8; 1G9U; 1GWB; 1H6T; 1JL5; 1K13; 1K14; 1K15; 1KOH; 1KOO; 1M0Z; 1M10; 1M9L; 1M9S; 1O6S; 1O6T; 1O6V; 1OOK; 1OTM; 1OTN; 1OTO; 1OZN; 1P8T; 1P8V; 1P9A; 1QYY; 1SQ0; 1U0N; 1W8A; 1WWL; 1XCD; 1XEC; 1XKU; 1ZIW; 2A0Z; 2BNH; 2ELL; 2FT3; 2ID5; 2JE0; 2JE1; 2JQD; 2OMT; 2OMU; 2OMV; 2OMW; 2OMX; 2OMY; 2OMZ; 2RR6; 2UZX; 2UZY; 2V70; 2V9S; 2V9T; 2WFH; 2WQU; 2WQV; 2WQW; 2WQX; 2XOT; 2Y5Q; 2Z62; 2Z63; 2Z65; 2Z7X; 2Z80; 2Z81; 2Z82; 3A79; 3A7B; 3A7C; 3B2D; 3CIG; 3CIY; 3CVR; 3FXI; 3G06; 3J0A; 3KJ4; 3P72; 3PMH; 3RW6; 3RW7; 3UL7; 3UL8; 3UL9; 3ULA; 3ULU; 3ULV; 3ZYI; 3ZYJ; 3ZYN; 3ZYO; 4ARN; 4ARR; 4AW4; 4B8C; 4G8A; 4GLP; |
View entry in original PROSITE format
View entry in raw text format (no links)
If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)