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Entry: PS51693

General information about the entry

Entry name [info] HCV_NS2_PRO
Accession [info] PS51693
Entry type [info] MATRIX
Date [info] 01-NOV-2013 CREATED; 10-MAY-2017 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC51693
Associated ProRule [info] PRU01030

Name and characterization of the entry

Description [info] Hepacivirus nonstructural protein 2 (NS2) protease domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=124;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=119;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2870798; R2=0.0075819; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=23255.1875000; R2=7.8712730; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=886; H_SCORE=30229; N_SCORE=9.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=556; H_SCORE=27632; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-34; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-255; BD=-255;
/M: SY='D'; M=  -4, -74,  74, -46,   4,  -9, -58,  -2, -57,   0, -60,   8, -69,  53, -62,  -4,   4, -62, -80, -61;
/M: SY='M'; M=  34,  32, -70, -11,  12, -68, -61,  -6,  -7, -17,  65, -66, -72,  14, -62,  -1, -58,  -8,  59,  45;
/M: SY='A'; M=  40, -69, -67, -68,  -1,  16, -65,  17, -63,  33, -49,  36, -73, -62,  -4,   0, -56,  -9, -75, -61;
/M: SY='L'; M=  -9,  22, -83, -78, -47, -83, -75,  56, -77,  63, -35, -79, -80, -73, -77, -71, -59,  29, -75, -57;
/M: SY='E'; M=  13, -72, -48,  73,   4, -69, -60, -64, -51, -25, -61, -56, -62,  36, -57,   6,  42,  -9, -77, -63;
/M: SY='R'; M=  19,  32,   4,   2, -66, -70, -64,  21,  25,   2, -55, -58, -69, -54,  40,   0,  20, -10, -79, -64;
/M: SY='L'; M= -65,  25,   7, -72,  37, -82, -69,  24, -74,  64,  24, -73, -80, -71, -74, -70,  -1,  -4, -70, -50;
/M: SY='F'; M= -63,  44, -77, -75,  49,   7, -68,  -4, -73,  47, -45, -70,   7, -72, -74, -64,  24,  -2, -64,  24;
/M: SY='Y'; M= -62,  25,  -5, -69,  11,  17, -62,  -7, -69,  32, -49, -66,  33, -68, -72, -61,  25,  -2, -61,  63;
/I:         I=-24; MD=-61;
/M: SY='T'; M=  -9,  35, -62, -65,  15, -66, -67, -71,  -7, -73, -69,  32,  11, -63, -67,  44,  63, -65, -84, -67; D=-24;
/I:         I=-24; MI=0; MD=-61; IM=0; DM=-61;
/M: SY='S'; M= -15, -73,   1, -53,   4, -66, -57,   4,  38, -19, -58,   8, -69,  34,  33,  39,  -3, -60, -70,  17;
/M: SY='P'; M=  21, -75, -66, -61, -70, -66,  40,  -1, -61, -63, -58,  10,  82, -62,  -1,  -1, -54,  40, -82, -67;
/M: SY='R'; M=   9, -72,  25, -51, -77,  -7, -58, -75,  23, -74, -66, -49, -66,  11,  56,  46,  34, -68, -80, -66;
/M: SY='P'; M=  36, -70, -72, -64,   8,  -4, -69, -48, -66,  31, -50, -67,  50,  15, -70,   6, -56,  26, -74, -61;
/M: SY='H'; M=  10,  32, -61,  -2, -72, -12,  75, -14,  -1, -68, -60, -55,   3, -50,  69,  -9, -60, -13, -82, -60;
/M: SY='R'; M=  -9, -77,  14, -54, -71, -70, -58, -64, -38, -21, -60, -57,  11, -48,  91,  20, -58,  12, -79, -64;
/M: SY='L'; M=  25, -66, -77, -71, -50, -74, -68, -37, -71,  64,  55, -72, -75, -67, -71, -61,  27,  17, -75, -57;
/M: SY='A'; M=  59, -66, -74, -68, -53, -65, -67, -42, -69,  47, -44, -70, -74, -65, -70,  -1, -55,  31, -71,  23;
/M: SY='R'; M= -17, -77, -61,  -3, -68, -71, -58, -57, -41, -62,  29,  35, -73,  45,  74, -58, -60,  31,  68, -59;
/M: SY='W'; M= -62, -74, -78, -70,   6, -77, -71, -44, -59,  45, -46, -72, -78, -63,  42,   0,   3,  33, 102, -49;
/M: SY='C'; M=  24,  73, -82, -75, -50, -76, -74,  10, -75,  62, -40, -77, -80, -71, -75, -67, -61,   1,  62, -57;
/M: SY='D'; M= -12, -71,  50,  35, -70,  12, -59, -65,  -2,   7,  23,  10, -65, -53, -60,  -2,  44, -63, -83, -67;
/M: SY='R'; M= -60,  35, -60, -57,   1, -18, -60, -61,  50, -21, -59,  35, -71, -52,  52,  -9,  24,  11, -77, -62;
/M: SY='C'; M=  25,  88, -80, -73, -54, -75, -72,  20, -69,  46,  20, -73, -79, -69,   1, -65, -60,  -6,  46, -60;
/M: SY='H'; M=  30, -71, -61, -60, -65,   9,  57, -66,   0, -68, -61,  10, -68, -55,  23,   6,  40,  -7,  49,  18;
/M: SY='R'; M=  -8, -73,  23, -57,  -2,  11, -61, -58,   3, -10,  30, -56, -71, -54,  58,  18,  -5,  15, -77, -61;
/M: SY='W'; M=  25,  32, -77, -73,   8, -72, -73,   0, -70,  45, -46,  10, -77, -69, -73, -63,  -4,  11, 100, -50;
/I:         I=-24; MD=-61;
/M: SY='G'; M= -62, -76, -73, -74,   8,  51, -66, -10, -65,  29, -53, -65, -77, -67,  18, -61,  18, -12, -66,  42; D=-24;
/I:         I=-24; MI=0; MD=-61; IM=0; DM=-61;
/M: SY='S'; M=  26, -69,  -2,   1, -77,  50, -63, -77, -57, -77, -70, -49, -65, -54,   1,  65,   7, -68, -79, -70;
/M: SY='H'; M=   8, -75,  29,  -1, -73, -64,  58,  -6,  18, -24, -62,   5,  49, -52,   6,  33, -54, -65, -83, -63;
/M: SY='Y'; M= -10, -79,  -5, -10, -45, -70, -57, -12,   4,   1, -56, -66,  50, -59, -62,  15, -59, -62,  80,  81;
/M: SY='V'; M=   8, -68, -73,  -5,  28, -77, -71,   6, -66,  21,  23, -69, -74, -66,  -8, -60,  27,  57, -74, -54;
/M: SY='Q'; M= -61, -75, -65, -50, -62, -74, -57, -50, -52,  44,  29, -60, -71,  96,  -1, -56,  23, -14, -74, -58;
/M: SY='M'; M=  29, -75,  -2, -56, -66, -17,  24,  -3,  34, -16,  52, -59,   4, -52,  51, -58, -61, -59,  51, -59;
/M: SY='W'; M=  45,  28, -78, -68,  33, -69, -72, -51, -60,  10, -53, -71, -76, -64,  38, -60, -61,  24,  97, -49;
/M: SY='L'; M= -12, -70, -83, -78,  47, -22, -74,  43, -76,  50, -38, -77, -79, -75, -76, -69, -60,  39, -68, -49;
/M: SY='L'; M= -63, -70, -84, -78, -45, -86, -73,  45, -77,  67,  33, -80, -80, -72, -76, -74, -59,  41, -75, -55;
/M: SY='W'; M= -60, -78, -68,  -6, -56, -70, -66, -60,   0, -15, -60, -64, -72,  16,  41,  32,  -4,  15, 119,  16;
/M: SY='R'; M=   9,  30, -73, -65,  -2, -75, -67,  22,   1,  24, -48, -66, -76, -59,  56,  -9, -58,  31, -75, -59;
/M: SY='C'; M=  57,  71, -73, -69,  28,  33, -69, -62, -65,   2,  30, -64, -74, -65,  -1, -53, -60, -57, -72, -60;
/M: SY='G'; M=  30,  35, -64, -10, -76,  72, -67, -81, -58, -78, -70, -55, -69,   5,  19,  -4, -62, -73,  55, -69;
/M: SY='W'; M=   3, -76,  35,  48, -63, -68,  29, -67, -50,  16, -59, -56, -68, -49,  36,  23, -58, -65,  51,  13;
/M: SY='R'; M= -65,  32, -60, -56,  26, -72,  34, -74,   3, -69, -62,  32, -74, -48,  90, -57,  22, -70, -75, -55;
/M: SY='G'; M= -50, -76, -59,   4, -83,  98, -68, -89, -66, -85, -75,   8, -67, -63, -73, -49, -66, -83, -75, -77;
/M: SY='T'; M=  -7, -68, -68,  -4, -58, -76,  32,  36, -66, -11,  37, -63, -69, -64, -69, -55,  58,  53, -83, -59;
/M: SY='W'; M= -72, -80, -81, -77,  68, -78, -57, -54, -71,   3, -52, -77, -82, -70, -70, -70,  -8, -60, 114,  94;
/M: SY='W'; M= -69, -73, -87, -79,  51, -85, -73,  35, -78,  69, -36, -82, -82, -74, -76, -77, -65, -40,  81, -42;
/M: SY='Y'; M= -72, -80, -73, -75,  51, -79, -40, -55, -67, -51, -50, -73, -84, -64, -64, -67, -66, -60, -29, 127;
/M: SY='Q'; M= -62, -78,  64,  21, -82, -65,  26, -80,  52, -78, -68,  35, -65,  65, -44,  -9, -56, -78, -83, -65;
/M: SY='H'; M= -69, -81, -53, -53, -68, -71, 149, -86, -58, -68, -54, -43, -70, -47, -52, -59, -68, -86,-103, -37;
/M: SY='M'; M= -13,  24, -78, -68, -49, -78, -63, -40,  -5,  67,  79, -72, -78,   9,  -7, -69, -61, -46, -73, -56;
/M: SY='G'; M= -12, -73,  26, -59, -78,  71,  32, -78, -60, -77, -69,  12, -66,  18, -66, -46,  49, -72, -81, -69;
/I:         I=-20; MD=-50;
/M: SY='Q'; M= -73, -96,  24, -54, -97, -77,  24, -88, -62, -88, -76, -64,  69,  81, -66,  -3, -69, -90, -91, -78; D=-20;
/I:         I=-20; MD=-50;
/M: SY='V'; M= -79, -87,-103, -96,   8,-103, -92,  -3, -94,  37,  24, -98, -99, -92, -93, -90, -76,  43, -91, -69; D=-20;
/I:         I=-20; MI=-50; MD=-50; IM=-50; DM=-50;
/M: SY='S'; M=   7, -81,  27,  -3, -87,  -8, -68, -84,  -3, -84, -77, -58,  28,  10,   2,  42,   5, -77, -89, -78; D=-20;
/I:         I=-20; DM=-50;
/M: SY='W'; M=   9, -83,  59, -54, -67, -73,  26, -76, -55, -21, -68, -58, -76,  16,  40, -61,  -3, -74,  81,  22; D=-20;
/I:         I=-20; DM=-50;
/M: SY='W'; M=   9, -82, -75, -70, -63, -17,  32, -68, -63, -12, -66,  -1,   6, -64,  18,  19, -66,  -9, 120, -54; D=-20;
/I:         I=-20; DM=-50;
/M: SY='A'; M=  62, -70, -81, -73, -61, -70, -76,  -2, -75,  45, -48, -76, -79, -71, -76, -60, -60,  19, -80, -67; D=-20;
/I:         I=-20; DM=-50;
/M: SY='A'; M=  65, -73, -67,   6, -76, -65,  29, -67,  -1, -19, -63, -65,  12, -59,   1, -53,  -1, -16, -83, -71; D=-20;
/I:         I=-20; DM=-50;
/M: SY='P'; M=  44, -74,  14,  37, -81,  13, -61, -75, -56, -77, -69,  12,  60,  11, -63,  18, -54, -69, -80, -73;
/M: SY='R'; M= -10, -79,  33,  22,  -4,  46, -59, -16, -49, -72, -66, -54,  18,  10,  51, -56, -63, -70, -71,  12;
/M: SY='L'; M= -64, -69, -76,   4,  12, -84, -69,   5, -72,  74, -35, -77, -78, -68, -73, -70,   5,  18, -71, -53;
/M: SY='R'; M=  -8, -77, -63,   2, -71, -14, -62, -61,  32, -15, -59, -60,  43, -50,  70, -58,  -5,  17, -77, -66;
/M: SY='E'; M=  11, -74,  54,  67, -77,  12, -59, -74,  -1, -18, -68, -50, -62, -47, -58,   1,  10, -69, -82, -70;
/M: SY='W'; M=  13, -70, -71,  -8,   9, -73, -66, -47,  -2,  59,  20, -68, -74,  14, -63,  -6,   5, -50,  59, -53;
/M: SY='W'; M=  26, -72,  40, -10, -57,   6, -69, -48, -67,  39,  24, -64, -73, -63, -70, -61, -60,  22,  81, -57;
/M: SY='V'; M=  -7,  23,  -6,  -3, -67,  35,  24, -48, -10, -16, -56, -62,  42, -64, -68, -59, -58,  56, -82, -67;
/M: SY='W'; M=  55,  32, -69, -65,  27, -60, -63, -62, -65, -14, -58, -61, -71, -61, -67,  45,   1, -57,  57,  48;
/M: SY='L'; M= -58, -70, -73, -65, -53, -76, -65,  -4, -63,  54,  33, -67, -75,  41,  -4,  18,  -1,  35, -76, -58;
/M: SY='E'; M= -62, -81,  69,  98, -85, -72, -53, -85, -45, -79, -76, -49, -58, -39, -54, -56, -60, -78, -86, -73;
/M: SY='P'; M= -66, -92, -67, -55, -86, -68, -70, -74, -63, -84, -70, -73, 128, -66, -75, -64, -59, -79, -79, -83;
/M: SY='Y'; M=  34,  55, -77, -73,  13, -73, -63,  -2, -71,  22, -46, -73, -79, -69, -71, -62, -58,  37, -59,  72;
/M: SY='S'; M= -56,  23, -67, -66,  38, -68, -60,  18, -58, -55,  28, -57, -70, -59,  21,  52,  49, -52, -65,  43;
/M: SY='P'; M= -11,  35, -78, -70,  31, -77, -73,  -4, -71,  20,  28, -75,  67, -72, -75, -66, -58,  51, -74, -57;
/M: SY='H'; M= -56, -68, -63, -64,  58, -17,  71, -61, -63,  -9, -56, -52, -69, -60, -65,  52,  59, -59, -71, -46;
/M: SY='P'; M=   3, -81,   7,  52, -82, -10, -61, -76, -50, -78, -69, -59,  83,  14,  24, -55,   5, -73, -80, -74;
/M: SY='M'; M= -55, -69, -63,  17, -63,  -8, -63,  -7, -57, -50,  80, -58, -66,  10,  -6,   1,  61,  30, -81, -62;
/M: SY='E'; M= -12, -79,  61,  80, -84, -68, -53, -82,   3, -77, -72,  15, -61,  46, -51, -53, -58, -76, -84, -70;
/M: SY='C'; M=  12,  85, -71,  -4, -61, -74, -71,  -3, -61,  15, -51, -66, -76, -64,  26, -12,   3,  43, -83, -66;
/M: SY='R'; M= -12, -79, -51,  55, -72, -73, -55, -13,  55, -71, -63, -55, -66,  18,  66, -57, -61, -68, -72,   8;
/M: SY='I'; M= -62, -74, -78,  -6,  35, -85, -77,  68, -66, -41, -44, -74, -76, -69,  18, -69, -58,  58,  49, -51;
/M: SY='I'; M=   9, -71, -79, -75, -51, -80,  37,  68, -73, -41, -42, -72, -75, -71, -74, -65, -55,  66, -75,  20;
/M: SY='R'; M= -62, -78, -55,  35, -58, -73, -51, -73,  24, -69, -62, -55, -69,  12,  72,  -2,  24, -69, -63,  64;
/M: SY='W'; M=  -9,  31,  98, -43, -74,  -6, -61, -82, -59, -80, -78,  15, -70, -59, -67, -57, -61, -80,  99, -61;
/M: SY='A'; M=  42, -71,  25,   2, -75,  28,  38, -66, -54, -70, -64,   2, -68, -54,  27,  21, -55,  11, -82, -66;
/M: SY='A'; M=  80, -65, -65, -61, -77,  43, -68, -70, -62, -71, -64, -57, -66,  10, -67,  -5,   2, -59, -76, -72;
/M: SY='R'; M= -64, -79,   7,   1,  28,  11, -56, -67, -40, -19,  51, -57, -73,  22,  83, -61, -64, -67, -71, -55;
/M: SY='T'; M=  16, -69, -58,   3, -72, -67, -63,  -7,  47, -65, -60, -52, -64,  26,   9,   1,  67, -13, -79, -65;
/M: SY='L'; M=  10, -68, -79, -72, -47, -78,  37, -35, -73,  75,  32, -75, -79, -67, -71, -69, -60,  17, -75, -54;
/M: SY='A'; M=  89, -63, -61,  16, -76, -52, -67, -67, -59, -68, -62, -59, -65, -55, -65,   4,   3, -54, -77, -71;
/M: SY='C'; M= -60, 151, -79, -79, -71, -74, -79, -78, -75, -69, -69, -65, -90, -81, -82,  -2, -59, -66,-100, -81;
/M: SY='G'; M= -50, -77, -64, -74, -82, 100, -69, -90, -64, -85, -74, -50, -69, -65,   8, -50, -68, -84, -74, -77;
/M: SY='D'; M= -63, -79,  97, -36, -84, -65, -53, -81,  -6, -79, -73, -40, -67,  53,  25,   5,  -5, -78, -90, -67;
/M: SY='C'; M= -59,  64, -62,  19,   0, -71, -67,  40, -59, -56, -56,  31, -72,  10,  -5,  18,   7,  19,  57, -59;
/M: SY='V'; M= -60,  32, -80, -76,   2, -84, -73,  56,  -6,   7, -42, -75, -78, -72, -71, -69, -57,  63, -68,  41;
/M: SY='R'; M= -14,  28,  45,  -6, -72, -10,  30, -69, -46, -17,  52,  40, -71,  12,  57, -56, -59, -68, -83, -63;
/M: SY='G'; M= -49, -77, -64, -76, -83, 103, -71, -91, -70, -86, -75, -50, -68, -67, -77, -49, -68, -84, -74, -78;
/M: SY='L'; M= -66, -71, -71, -63, -49, -79, -64, -42,  52,  76, -37,   7, -77, -59, -54, -69, -60, -48, -72, -57;
/M: SY='P'; M= -15, -90, -67, -55, -85, -67, -70, -73, -63, -83, -70, -73, 125, -66, -75, -62, -59, -77, -79, -83;
/M: SY='V'; M= -52, -66, -83, -77, -54, -84, -86, -19, -75, -39, -42, -78, -79, -77, -76, -66, -50, 103, -88, -62;
/M: SY='V'; M= -15, -67, -73, -70,  16, -70, -70,   4, -68, -47,  26, -65, -74, -66, -70,  52, -48,  71, -73,  17;
/M: SY='A'; M=  94,  63, -69, -62, -75, -51, -71, -66, -64, -67, -62, -63, -69, -61, -69, -43, -53, -53, -78, -72;
/M: SY='R'; M= -67, -83, -63, -51, -76, -77, -52, -83, -24, -75, -64, -56, -75, -40, 117, -61, -66, -76, -76, -62;
/M: SY='R'; M= -65,  60, -73, -66, -54, -79, -61, -48, -52,  57,  56,   3, -80, -58,  65, -68, -62, -52, -76, -59;
/M: SY='G'; M= -51, -76,   4, -70, -83,  98, -67, -89, -67, -86, -75,  17, -68, -65, -75, -49, -66, -84, -76, -77;
/M: SY='D'; M= -64, -80,  88,  38, -83, -12, -55, -83,   1, -80, -74, -44, -66, -47,  52, -55,  -4, -78, -88, -69;
/M: SY='E'; M= -58, -71, -54,  62,  10, -72, -60, -55, -56,  40,  26, -60, -67,   8, -61,  33,  21, -56, -74, -58;
/M: SY='V'; M= -54, -68, -83, -78, -53, -85, -86,  40, -75, -38, -41, -78, -78, -77, -77, -67, -52,  96, -86, -61;
/M: SY='M'; M=  -5,  28, -77, -68,  35, -77,  28,  16, -63,  45,  68, -69, -77,   8,  21, -67, -62, -46, -70, -49;
/M: SY='A'; M=  47,  33, -79, -72, -54, -72, -75,  34, -73,  46, -41, -74, -76, -69, -74, -61, -56,  38, -77, -61;
/M: SY='G'; M= -49, -77, -64, -76, -83, 103, -71, -91, -70, -86, -75, -50, -68, -67, -77, -49, -68, -84, -74, -78;
/M: SY='P'; M=   8,  32, -75, -68, -61, -71, -76,  21, -69, -10, -52, -71,  63, -69, -74,  17, -54,  54,  58, -63;
/M: SY='A'; M=  63, -66, -69, -67,  29,  22, -70, -50, -66, -19, -55,   9, -71, -66, -70, -50,   2,  35, -73, -60;
/M: SY='D'; M= -12, -79,  56, -46, -80,  -8, -56, -75,  14, -74,  28,  11,  52,  40,  36,  -3, -57, -73, -81, -68;
/M: SY='D'; M= -56, -72,  42, -57, -64,   8, -65,  -6,  -3,  20, -54, -56,  12, -59,  -2,  42, -53,  31, -81, -65;
/I:         I=-24; MI=0; MD=-61; IM=0; DM=-61;
/M: SY='H'; M=  -1,  24,  -9, -11, -83, -92,  30, -86, -87,  -1, -79, -82, -96, -82, -90,  -9,  -3, -84,-100,   9; D=-24;
/I:         I=-24; DM=-61;
/M: SY='L'; M= -82, -89, -85,  -6, -68, -95, -80, -61, -80,  57, -56,   5, -96, -78,  -6, -14, -77, -66, -93, -76; D=-24;
/I:         I=-24; DM=-61;
/M: SY='P'; M= -63, -87, -64,  -4, -82,  -8, -67, -72, -62, -78,  26, -68, 117, -63, -72,  -8, -58, -75, -79, -79;
/M: SY='P'; M= -60, -78,   9,  -2, -77, -69, -64, -63,  48, -72, -64, -57,  82,  11, -53,   0,  24,  14, -80, -71;
/M: SY='G'; M= -49, -77, -64, -76, -83, 103, -71, -91, -70, -86, -75, -50, -68, -67, -77, -49, -68, -84, -74, -78;
/M: SY='W'; M= -20, -87, -92, -79,  68, -75, -79, -63, -73, -59, -63, -86, -81, -74, -74, -75, -77, -72, 156,  43;
/M: SY='R'; M=  -8, -73, -60,  19, -70, -72, -61, -54,   2, -62, -58, -58, -69,  24,  68,   1,  22,  45, -80, -64;
/M: SY='P'; M= -67, -76, -74, -66, -51, -79,  51,   2, -63,  57,  33, -71,  58, -62,  22, -69, -63, -51, -71,  17;
/M: SY='T'; M= -56,  83, -64, -66, -61, -70, -68, -55, -64,  30, -53,   8, -70, -65, -70,   7,  84, -52, -86, -65;
/I:         E1=0; IE=-255; DE=-255;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 33 in 33 different sequences
Number of true positive hits 33 in 33 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Feature key [info] DOMAIN
Feature description [info] Peptidase C18
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
33 sequences

POLG_GBVB   (Q69422    ), POLG_HCV1   (P26664    ), POLG_HCV6A  (Q5I2N3    ), 
POLG_HCVBB  (Q68749    ), POLG_HCVBK  (P26663    ), POLG_HCVCO  (Q9WMX2    ), 
POLG_HCVED  (O39929    ), POLG_HCVEU  (O39927    ), POLG_HCVEV  (O39928    ), 
POLG_HCVH   (P27958    ), POLG_HCVH9  (Q81754    ), POLG_HCVIN  (Q913D4    ), 
POLG_HCVJ1  (Q03463    ), POLG_HCVJ4  (O92972    ), POLG_HCVJ6  (P26660    ), 
POLG_HCVJ8  (P26661    ), POLG_HCVJA  (P26662    ), POLG_HCVJF  (Q99IB8    ), 
POLG_HCVJK  (Q68801    ), POLG_HCVJL  (Q68798    ), POLG_HCVJP  (Q9DHD6    ), 
POLG_HCVJT  (Q00269    ), POLG_HCVK3  (Q81495    ), POLG_HCVNZ  (Q81258    ), 
POLG_HCVR6  (Q913V3    ), POLG_HCVSA  (O91936    ), POLG_HCVT5  (O92529    ), 
POLG_HCVTR  (Q81487    ), POLG_HCVTW  (P29846    ), POLG_HCVVA  (Q9QAX1    ), 
POLG_HCVVN  (O92530    ), POLG_HCVVO  (O92531    ), POLG_HCVVP  (O92532    )
» more

PDB
[Detailed view]
2 PDB

2HD0; 2MKB

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