PROSITE entry PS51799
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General information about the entry
Entry name [info] | ZF_C2H2_AKAP95 |
Accession [info] | PS51799 |
Entry type [info] | MATRIX |
Date [info] |
01-MAY-2016 CREATED;
01-MAY-2016 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC51799 |
Associated ProRule [info] | PRU01140 |
Name and characterization of the entry
Description [info] | Zinc finger C2H2 AKAP95-type profile. |
Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=24; /DISJOINT: DEFINITION=PROTECT; N1=3; N2=22; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.5329590; R2=0.0056179; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=1152; N_SCORE=10.0; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=529; N_SCORE=6.5; MODE=1; TEXT='R?'; /DEFAULT: M0=-78; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='C'; M=-139, 161,-159,-159,-149,-154,-159,-156,-154,-146,-147,-145,-169,-162,-161,-141,-139,-143,-179,-160; /M: SY='S'; M= 46, 23, 17,-136, 8, -85,-140,-105,-139, -41, 28, -78,-145, -77,-143, 85, -78, -28,-156,-139; /M: SY='A'; M= 73,-143,-154,-147, 48,-143,-149, -12,-148, 34,-124,-149, -42,-146,-149,-133,-134, 30,-146,-131; /M: SY='C'; M=-139, 161,-159,-159,-149,-154,-159,-156,-154,-146,-147,-145,-169,-162,-161,-141,-139,-143,-179,-160; /M: SY='D'; M=-140,-156, 87, 1,-159, -92, -28,-159, 80,-157,-150, -47,-142, -33, 6, -1,-134,-155,-161,-145; /M: SY='F'; M= -59,-148,-157,-153, 69,-157,-141, -26,-150, 28, 44,-151,-157,-149,-149, -17, -23, 50,-133, 66; /M: SY='R'; M=-145,-155,-143, 10, 58,-156, 44,-137,-124, 28,-128,-140,-154, 42, 74,-142,-142,-140,-138, 44; /I: I=-30; MD=-77; /M: SY='I'; M=-170,-180,-192,-188, -63,-195,-188, 64,-185, 8,-142,-185,-184,-182,-186,-180,-165, 16,-182,-163; D=-30; /I: I=-30; MI=-77; IM=-77; DM=-77; /M: SY='P'; M=-133,-151,-140,-136,-150,-142,-144, -63,-138, -10,-139,-135, 98,-139,-147, 51, 72,-139,-159,-148; /M: SY='F'; M= 29, -33, 34, -15, 76,-145,-139,-131,-142, -18, 70, 12, -50,-141,-145, 0, 1, -43,-143, -77; /M: SY='Q'; M= -71,-152, 16, 40, -78,-145, 6,-136, -72, -16, -28, 48,-147, 67, -89, 18,-132, 24,-148, 53; /M: SY='H'; M= -18,-154, 18, 38, 42, -38, 51, -5, -38, -46,-137, 13, 7, 26, 32, -2,-136, -69,-149, -10; /M: SY='W'; M= -24,-154, 15, 58,-153, 7, 39, -66, 18,-151, -46, -90,-142, 40, -10, 42, -31, -77, 62,-139; /M: SY='E'; M= -69,-151, 27, 75, -62, -61, -16, -10,-131, 2, -68,-132,-142, 19,-137, 43, 3, 2,-158,-142; /M: SY='I'; M=-140,-150,-162,-157,-125,-164,-153, 82,-154, 44, 73,-155,-154,-149,-154,-150,-136, 38,-153,-133; /M: SY='Q'; M= -6,-155, -32, 51,-155, -51, -41, -56, 9, -22, -17, -7,-143, 102, -9, -21, -36,-146,-154,-142; /M: SY='Q'; M= 27,-152, 16, 25,-155,-142,-133,-150, 51, -43,-140, 1,-143, 70, 36, -11, -19, -79,-155,-143; /M: SY='H'; M=-147,-159,-131,-131,-145,-149, 158,-164,-136,-146,-131,-120,-147,-125,-130,-136,-145,-163,-181,-114; /M: SY='L'; M=-142,-146,-158,-153, 42,-161,-147, 0,-152, 79, 21,-153,-157,-149,-151,-146, 31, -8,-146,-126; /M: SY='R'; M= -14,-154, 33, 44,-154, -43, 14,-149, 47,-149,-142,-128,-143, 35, 51, -19, 14, -10,-157, -72; /M: SY='S'; M=-120,-141,-133,-135,-151, -52,-137,-149,-134,-153,-147, -38,-141,-128,-139, 112, 35,-142,-161,-144; /M: SY='Q'; M= -2,-152, -64, 2,-151,-145, -18, -80, 45, -36, -8, -49, 48, 51, 30, 11, 20, -7,-155,-143; /M: SY='F'; M= -58,-150, 65, 37, 65, -60,-137,-138,-137, -7, 34,-131,-146, -31,-142, 13, 36, -98,-147, -20; /M: SY='H'; M=-147,-159,-131,-131,-145,-149, 158,-164,-136,-146,-131,-120,-147,-125,-130,-136,-145,-163,-181,-114; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
Total number of hits | 28 in 14 different sequences |
Number of true positive hits | 28 in 14 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 0 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
Matrix type [info] | protein_domain |
Scaling database [info] | reversed |
Author [info] | CJA_Sigrist |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 2 |
Feature key [info] | ZN_FING |
Feature description [info] | C2H2 AKAP95-type |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
14 sequences
AKAP8_CANLF (Q5VK71), AKAP8_HUMAN (O43823), AKAP8_MOUSE (Q9DBR0), AKAP8_RAT (Q63014), AKP8L_HUMAN (Q9ULX6), AKP8L_MOUSE (Q9R0L7), ZN326_BOVIN (F1MJM0), ZN326_CHICK (Q5ZJ02), ZN326_DANRE (A2CEZ5), ZN326_HUMAN (Q5BKZ1), ZN326_MOUSE (O88291), ZN326_PONAB (Q5RCA4), ZN326_XENLA (A2RV70), ZN326_XENTR (Q28F29)» more
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