PROSITE entry PS51977
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General information about the entry
| Entry name [info] | WGR |
| Accession [info] | PS51977 |
| Entry type [info] | MATRIX |
| Date [info] |
29-SEP-2021 CREATED;
29-SEP-2021 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51977 |
| Associated ProRule [info] | PRU01321 |
Name and characterization of the entry
| Description [info] | WGR domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=98; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=93; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4080639; R2=0.0084141; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=1140; N_SCORE=12.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=487; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-21; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='T'; M= -38, -58, 6, -14, -47, 9, -33, -46, 8, -55, -63, 17, -18, -16, -7, 11, 17, -19, -20, -55; /M: SY='Y'; M= 20, 6, -61, -50, -20, 4, 35, -49, -27, -27, -20, -35, -44, -41, -37, -15, -11, -15, -12, 42; /M: SY='H'; M= -38, -41, -29, 7, -13, -54, 83, -51, -1, -33, -23, -38, -18, 3, 4, -19, -26, -32, -35, -5; /M: SY='V'; M= -39, -43, -79, -51, -52, -83, -70, 39, -82, -5, 4, -71, -43, -61, -67, -39, -33, 67, -90, -49; /M: SY='Y'; M= -34, -49, -73, -69, 40, -58, 11, -15, -55, 12, 21, -78, -44, -59, -57, -61, -27, -2, -3, 80; /M: SY='Q'; M= -21, 0, -9, 23, -67, -51, 0, -25, 14, -48, 2, -28, -18, 34, -4, 3, -2, 6, -39, -9; /M: SY='D'; M= -50, -58, 80, 29, -87, -36, -11, -64, -1, -63, -45, 1, -28, 6, -23, -16, -30, -55, -95, -60; /I: I=-9; MD=-23; /M: SY='G'; M= -15, -72, 17, 1, -64, 24, -37, -80, -3, -70, -26, 5, 3, 1, -25, 0, -32, -60, -92, -33; D=-9; /I: I=-9; MD=-23; /M: SY='D'; M= -25, -46, 25, -5, -64, 0, -36, -69, -14, -68, -42, 17, -43, -22, -26, 5, -3, -47, -35, -52; D=-9; /I: I=-9; MI=0; MD=-23; IM=0; DM=-23; /M: SY='D'; M= -32, -26, 18, -7, -14, -40, -19, -19, -17, -30, -35, -33, -45, -19, -37, -21, 5, -11, -62, -55; D=-9; /I: I=-9; DM=-23; /M: SY='V'; M= -8, -23, -69, -48, -32, -76, -27, 18, -40, -16, -11, -61, 12, -55, -37, -54, -14, 24, -36, -14; D=-9; /I: I=-9; DM=-23; /M: SY='Y'; M= -52, -35, -50, -47, 17, -64, -24, -53, -66, -17, 14, -52, -48, -39, -47, -30, -24, -55, 69, 87; D=-9; /I: I=-9; DM=-23; /M: SY='D'; M= -45, -54, 53, -26, -52, -64, 8, -61, -27, -18, -16, 29, -20, 4, -24, 23, -2, -49, -64, -43; D=-9; /I: I=-9; DM=-23; /M: SY='A'; M= 43, 42, -80, -49, -35, -66, -71, -1, -55, -12, 1, -48, -54, -47, -67, -24, 1, 33, -33, -59; D=-9; /I: I=-9; DM=-23; /M: SY='M'; M= -32, -37, -43, -31, -37, -60, 10, -25, 4, -10, 57, -18, -57, -26, -15, -16, 40, 13, -63, 23; D=-9; /I: I=-9; DM=-23; /M: SY='L'; M= -59, -30, -72, -57, -12, -75, -41, -18, -47, 70, 18, -74, -63, -45, -43, -71, -17, -4, -40, -34; D=-9; /I: I=-9; DM=-23; /M: SY='N'; M= -16, -16, 2, 7, -36, -21, 5, -35, -36, -42, -29, 60, -75, -5, -4, -2, 21, -8, -88, -18; D=-9; /I: I=-9; DM=-23; /M: SY='Q'; M= -34, -22, -46, -48, -3, -56, -23, -32, 22, 13, -4, -29, -60, 53, 44, -31, -56, -25, -48, 16; D=-9; /I: I=-9; DM=-23; /M: SY='T'; M= -13, 0, -55, -30, -43, -47, -25, 21, -18, -34, -52, -32, -32, -11, -10, 6, 58, 25, -60, -51; D=-9; /I: I=-9; DM=-23; /M: SY='D'; M= -51, -30, 80, 3, -30, -42, -20, -61, -19, -40, -60, 52, -59, -11, -25, -14, -44, -52, -56, -12; D=-9; /I: I=-9; MI=0; MD=-23; IM=0; DM=-23; /M: SY='P'; M= -11, -52, -22, -39, -44, -21, -29, 34, -34, 13, -6, -34, 45, -16, -41, -12, -19, 16, -29, -42; D=-9; /I: I=-9; MI=0; MD=-23; IM=0; DM=-23; /M: SY='Q'; M= 12, -77, 12, 8, -58, 16, 2, -45, -4, -38, -18, -26, -30, 30, -19, 29, -1, -19, -50, -42; D=-9; /I: I=-9; MI=0; MD=-23; IM=0; DM=-23; /M: SY='R'; M= -4, -14, 3, -1, -13, -1, 16, -42, 20, -48, -32, 25, -34, 11, 26, 4, 20, -41, -12, 8; /M: SY='N'; M= -40, -47, -12, -30, -64, 36, -16, -72, 12, -63, -69, 92, -61, -29, -9, -14, -10, -45, -86, -52; /M: SY='M'; M= -14, -21, -30, -24, -32, -53, -12, -14, 17, -24, 56, 47, -43, -5, 1, 40, 6, -20, -80, -39; /M: SY='N'; M= -1, -34, 18, -25, -51, -38, 32, -59, -14, -65, -59, 94, -60, -14, -1, -10, -36, -61, 3, 8; /M: SY='K'; M= -30, -58, -22, 2, -44, -48, -30, -44, 72, -70, -25, -5, -60, -18, 45, 28, -35, -42, -50, -24; /M: SY='F'; M= -55, -42, -69, -70, 98, -81, -58, -32, -27, -29, -42, -50, -67, -64, -14, -56, -66, -30, -9, 78; /M: SY='Y'; M= -61, -7, -65, -68, 16, -73, 2, -44, -46, -44, -41, -56, -72, -33, -41, -54, -49, -43, 86, 117; /M: SY='K'; M= -13, -36, -34, 8, -38, -48, 6, 25, 38, -11, -28, -10, -58, 15, 37, -12, -7, 1, -77, -29; /M: SY='M'; M= -34, -72, -65, -67, -34, -53, -57, 56, -43, 51, 67, -47, -54, -38, -58, -65, -38, 14, -58, -46; /M: SY='Q'; M= -27, -64, -11, 26, -81, -44, -32, -51, -3, -58, -24, -51, -44, 103, -16, 10, 6, -63, -23, -35; /M: SY='L'; M= -30, -31, -68, -70, -30, -59, -29, 49, -75, 54, -19, -60, -79, -26, -64, -63, -33, 46, -56, -28; /M: SY='L'; M= -33, -44, -35, 1, -9, -54, -3, 27, -30, 50, -14, -28, -56, 17, -31, -19, -17, 8, -33, 4; /M: SY='E'; M= -17, -32, -13, 52, -37, 4, 13, -38, 24, -37, -44, -41, 29, 40, 0, -24, -32, -14, -58, -22; /M: SY='D'; M= -20, -29, 52, -8, -58, -16, 35, -51, -13, -40, -43, 29, -18, -19, -13, 36, 28, -23, -27, -15; /M: SY='D'; M= -29, -62, 58, 5, -49, -7, -5, -38, 15, 18, -53, 26, -2, -27, -20, -4, 2, -35, -82, -40; /I: I=-12; MD=-29; /M: SY='F'; M= -8, -33, 20, -24, 39, -7, -42, -44, 5, -45, -48, 7, -31, -19, -41, 3, -3, -21, -52, -59; D=-12; /I: I=-12; MD=-29; /M: SY='G'; M= -23, -52, -25, -14, -71, 8, -41, -70, 3, -60, -55, -4, -39, -17, -21, -7, -11, -59,-103, -71; D=-12; /I: I=-12; MI=0; MD=-29; IM=0; DM=-29; /M: SY='G'; M= -55, -86, 12, -7, -69, 39, 20, -70, 3, -77, -80, 28, -18, -32, -13, 4, -22, -66, -92, -44; D=-12; /I: I=-12; DM=-29; /M: SY='T'; M= -28, -24, 4, 9, -43, -13, -9, -37, 12, -18, -24, 6, -31, 8, 9, -1, 24, -39, -64, -63; D=-12; /I: I=-12; DM=-29; /M: SY='Y'; M= -33, 8, -82, -81, 47, -84, 12, -24, -76, -32, -43, -53, -69, -52, -75, -51, -36, -7, 65, 91; D=-12; /I: I=-12; DM=-29; /M: SY='W'; M= 3, 31, -63, -55, -8, -53, 18, 9, -36, -33, 5, -39, -80, -34, -23, 13, -13, 3, 69, 45; D=-12; /I: I=-12; DM=-29; /M: SY='V'; M= -35, 10, -73, -69, 13, -81, -49, 9, -55, 51, -1, -58, -79, -53, -73, -47, 11, 55, -74, -22; /M: SY='W'; M= -31, -38, -68, -39, 69, -74, 2, -8, -46, -12, -17, -28, -65, -35, -30, -47, 16, 13, 98, 43; /M: SY='R'; M= -26, 7, -55, -50, 2, -63, -23, -16, -15, -29, -4, -1, -71, -14, 60, -6, 55, 14, -35, -15; /M: SY='R'; M= -9, -11, -42, 5, -55, -63, 32, -48, 24, -64, -45, 21, -70, 6, 76, 14, -8, -45, -80, -55; /M: SY='W'; M= -74, -69, -90, -51, 11, -75, -63, -62, -39, -61, -48, -69, -79, -60, -53, -51, -54, -79, 164, 60; /M: SY='G'; M= -36, -76, -64, -68, -74, 98, -70, -87, -68, -70, -42, -43, -68, -66, -57, -10, -32, -73, -74, -64; /M: SY='R'; M= -57, -63, -38, -43, -64, -47, -18, -73, 17, -59, -40, -41, -41, -26, 107, -45, -58, -63, -76, -63; /M: SY='V'; M= -35, -55, -71, -73, -38, -68, -50, 65, -72, -7, -32, -38, -38, -66, -49, -28, 17, 65, -44, -46; /M: SY='G'; M= -47, -77, -32, -55, -74, 98, -55, -88, -48, -67, -47, -17, -69, -66, -66, -23, -64, -71, -53, -76; /M: SY='T'; M= -7, -31, 24, 28, -49, -28, -19, -44, -4, -36, -20, -19, -59, -4, -17, 13, 67, -18, -38, -20; /M: SY='S'; M= -1, -53, 14, 4, -46, -19, -1, -29, 23, -32, -27, 13, 7, -6, 21, 26, 20, -12, -47, -45; /M: SY='G'; M= -22, -32, -25, -37, -70, 79, -48, 5, -32, -35, -49, -17, -18, -11, -19, -32, -17, -21, -38, -49; /M: SY='Q'; M= -22, -64, -44, -18, -49, 30, -21, -31, 11, -54, -24, -18, -15, 85, 22, -7, -10, -35, -75, -32; /I: I=-10; MD=-26; /M: SY='G'; M= -32, -50, -23, -18, -76, 14, -19, -75, -54, -73, -68, -1, -52, 4, -46, -8, -36, -66, -31, -47; D=-10; /I: I=-10; MI=0; MD=-26; IM=0; DM=-26; /M: SY='S'; M= -32, -7, -25, 5, -3, -25, 14, -18, 12, -22, -4, 12, -51, 21, 13, 26, 25, -17, -8, 11; D=-10; /I: I=-10; DM=-26; /M: SY='Q'; M= -30, -27, -27, -13, -52, -55, -20, -21, 47, 13, 11, -2, -44, 54, 35, -16, -5, -25, -76, -45; /M: SY='T'; M= -4, -11, -27, 7, -15, -42, -8, 8, 3, 14, 0, -21, -56, -13, -1, -7, 33, 23, -32, -13; /M: SY='E'; M= -28, -35, 25, 34, -30, -1, 14, -27, 31, -22, -52, -29, 21, -1, -15, -5, 25, -25, -79, -25; /M: SY='P'; M= -24, 9, -12, 21, -4, 3, -3, -30, -7, -18, -24, -13, 54, 11, -26, 5, 14, -32, 20, -1; /M: SY='F'; M= -43, 19, -18, -26, 80, 11, 20, -51, -31, -29, -17, -41, 9, -19, -45, -26, -33, -33, -6, 50; /M: SY='S'; M= 13, -24, 29, 9, -23, 6, -7, -56, -24, -25, -4, -1, 19, -3, -23, 37, 11, -31, -20, -23; /M: SY='S'; M= -34, -33, 50, -16, -51, -15, -30, -59, -18, -54, -61, 38, -20, -26, -29, 57, 42, -48, -56, -63; /M: SY='L'; M= 6, -34, -38, 27, -10, -53, -20, -9, 16, 32, -20, -42, 7, 3, 10, -25, -37, 1, -4, -14; /M: SY='E'; M= 17, -57, 53, 56, -71, -15, -13, -51, -5, -48, -46, -4, -13, 9, -21, 7, -23, -44, -43, -26; /M: SY='E'; M= 16, -49, 36, 49, -49, -19, -36, -50, 18, -30, -33, -10, -51, 21, -15, 12, 2, -26, -54, -48; /M: SY='A'; M= 89, 27, -55, -58, -65, -25, -53, -39, -42, -43, -39, -55, -58, -55, -68, -24, -31, -27, -77, -71; /M: SY='I'; M= -16, -45, -43, 13, -5, -56, -58, 44, 23, 7, 17, -42, -64, 15, 0, -29, -9, 23, -74, -29; /M: SY='K'; M= 17, -29, 16, 15, -52, -38, -13, -40, 51, -43, -36, -1, -67, 17, 25, 8, 1, -35, -20, -36; /M: SY='E'; M= 37, -38, 0, 63, -28, -41, 2, -35, -4, -15, -15, -18, -65, -1, -9, -11, -16, -35, -41, -29; /M: SY='F'; M= -4, -40, -72, -67, 103, -63, -59, -39, -44, 3, 2, -44, -71, -58, -54, -64, -45, -31, 2, 21; /M: SY='E'; M= 1, 17, 16, 51, -50, -27, -26, -58, 32, -22, -11, 2, -66, 31, 9, -17, -15, -31, -80, -52; /M: SY='K'; M= -9, -76, 6, 9, -65, -45, -17, -71, 73, -46, -35, -11, -67, 7, 40, 3, -22, -49, -45, -59; /M: SY='K'; M= -46, -45, -56, -52, 2, -79, -38, 26, 49, 41, 7, -40, -56, 1, -6, -63, -28, 8, 8, -30; /M: SY='F'; M= -29, -58, -81, -44, 94, -68, -48, 14, -41, -4, -28, -61, -55, -57, -47, -58, -33, 3, -17, 42; /M: SY='R'; M= 5, -52, -34, 14, -10, -31, 3, -48, 45, -10, -31, -7, -70, 13, 51, -9, -30, -42, -32, -3; /M: SY='E'; M= 13, -75, 42, 62, -63, -40, -57, -56, 3, -56, -51, -22, -64, 30, -10, 27, -21, -54, -81, -42; /M: SY='K'; M= -48, -63, -44, -37, -51, -71, -23, -67, 100, -43, -38, -42, -52, -13, 2, -44, -46, -44, -41, -38; /M: SY='T'; M= -35, -5, -56, -33, -66, -61, -41, -22, -29, -12, -5, -34, -48, -19, 11, 11, 90, -19, -84, -47; /M: SY='G'; M= -20, -57, -35, -40, -62, 67, -25, -73, 40, -55, -51, -14, -46, -16, 38, -15, -29, -46, -76, -50; /M: SY='N'; M= -51, -55, -26, -38, -36, -32, -9, -29, 46, -20, -53, 83, -44, -14, 28, -29, -31, -27, -53, -46; /M: SY='G'; M= -6, -58, 17, 26, -61, 55, 0, -61, -4, -44, -60, 16, -21, -13, -18, 6, -10, -30, -60, -41; /M: SY='W'; M= -58, -42, -44, -71, 26, -67, -57, -59, -60, -52, -57, -67, -62, -69, -58, -71, -69, -57, 148, 88; /M: SY='E'; M= 13, -17, 9, 41, -39, -1, -12, -33, -5, -38, -30, -9, -34, 18, 11, 6, -3, -4, -5, -21; /M: SY='D'; M= -2, -26, 45, 42, -50, -49, -20, -42, -8, -24, -26, 32, 22, 7, -21, -10, -9, -23, -64, -31; /M: SY='R'; M= -2, -17, -21, -18, -39, -35, -10, -8, 7, -22, -24, -43, -35, -19, 72, -19, -20, 1, 34, -28; /I: I=-24; MD=-60; /M: SY='D'; M= -5, -49, 24, 17, -13, -4, 22, -35, 5, -25, -26, -7, 2, -4, -20, -13, -10, -28, -42, -35; D=-24; /I: I=-24; MI=0; MD=-60; IM=0; DM=-60; /M: SY='N'; M= -11, -61, 35, 9, -44, -13, -2, -65, 26, -58, -28, 38, 18, -11, -10, 15, -7, -59, -39, -45; /M: SY='F'; M= -13, -65, -30, -31, 83, -29, -46, -24, -42, -16, -4, -31, -25, -54, -33, -40, -12, -16, -39, 15; /M: SY='V'; M= -8, -36, -8, 19, -59, -32, -24, -26, 16, -46, -26, -15, -7, 21, 6, -16, 9, 21, -86, -42; /M: SY='K'; M= -12, -35, -35, -2, -21, -42, -22, -36, 52, -36, -25, -22, 29, 2, 5, -6, -22, -33, -81, -19; /M: SY='K'; M= -21, -42, -32, -18, -46, -43, 18, -4, 37, -15, 7, -16, -18, 31, -5, -30, -38, 8, -82, -12; /M: SY='P'; M= -4, -49, -19, -5, -54, -36, -23, -62, -6, -69, -64, -31, 89, -38, -24, -20, -17, -48, -55, -74; /M: SY='G'; M= -24, -65, -18, -19, -55, 55, -26, -60, 19, -41, -37, 13, -41, -31, -1, -14, -30, -42, -85, -51; /M: SY='K'; M= -27, -38, -31, -11, -62, -46, -1, -64, 71, -50, -26, -35, -51, 0, 22, -20, -30, -53, -83, -25; /M: SY='Y'; M= -27, -84, -25, -44, 36, -63, -37, -41, -38, -27, 14, -62, -45, -42, -42, -38, -16, -18, -43, 91; /I: E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 32 in 32 different sequences |
| Number of true positive hits | 32 in 32 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Feature key [info] | DOMAIN |
| Feature description [info] | WGR |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
32 sequences
PARP1_ARATH (Q9ZP54), PARP1_BOVIN (P18493), PARP1_CAEEL (Q9N4H4), PARP1_CHICK (P26446), PARP1_CRIGR (Q9R152), PARP1_DANRE (Q5RHR0), PARP1_HUMAN (P09874), PARP1_MAIZE (Q9ZSV1), PARP1_MOUSE (P11103), PARP1_ORYSJ (Q7EYV7), PARP1_RAT (P27008), PARP1_XENLA (P31669), PARP2_ARATH (Q11207), PARP2_CAEEL (Q09525), PARP2_HUMAN (Q9UGN5), PARP2_MAIZE (O50017), PARP2_MOUSE (O88554), PARP3_ARATH (Q9FK91), PARP3_CHICK (E1BSI0), PARP3_HUMAN (Q9Y6F1), PARP3_MEDTR (Q1SGF1), PARP3_MOUSE (Q3ULW8), PARP3_ORYSJ (Q0E0Q3), PARP3_SOYBN (Q9SWB4), PARP_DROME (P35875), PARP_SARPE (Q11208), PRP2A_ORYSJ (Q5Z8Q9), PRP2B_ORYSJ (Q0JMY1), TNKS1_CAEEL (Q9TXQ1), Y4DW_SINFN (P55422), YEHF_ECOLI (P33345), YFES_ECOLI (P78271)» more
|
| PDB [Detailed view] |
18 PDB
2CR9; 2EOC; 4DQY; 4OPX; 4OQA; 4OQB; 6F1K; 6F5B; 6F5F; 6USJ; 6X0L; 6X0M; 6X0N; 7AEO; 7S68; 7S6H; 7S6M; 7S81 » more |