Entry: PS60004

General information about the entry

Entry name [info] OMEGA_CONOTOXIN
Accession [info] PS60004
Entry type [info] PATTERN
Date [info] OCT-2004 (CREATED); OCT-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC60004

Name and characterization of the entry

Description [info] Omega-conotoxin family signature.
Pattern [info]
C-[SREYKLIMQVN]-x(2)-[DGWET]-x-[FYSPKV]-C-[GNDSRHTP]-x(1,5)-[NPGSMTAHF]-
[GWPNIYRSKLQ]-x-C-C-[STRHGD]-x(0,2)-[NFLWSRYIT]-C-x(0,3)-[VFGAITSNRKL]-
[FLIKRNGH]-[VWIARKF]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 66 in 66 different sequences
Number of true positive hits 58 in 58 different sequences
Number of 'unknown' hits 0
Number of false positive hits 8 in 8 different sequences
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 87.88 %
Recall (true positives / (true positives + false negatives)) 95.08 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 13
Site [info] disulfide at position 14
Site [info] disulfide at position 18
Site [info] disulfide at position 23
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
58 sequences

CM7E_CONCN  (P0DKQ3    ), CM7F_CONCN  (P0DKQ4    ), CM7G_CONCN  (P0DKQ5    ), 
CM7J_CONCN  (P0DKQ6    ), CO111_CONTE (Q9U648    ), CO112_CONST (Q5K0D6    ), 
CO115_CONST (Q5K0D5    ), CO12A_CONPL (Q9XYZ1    ), CO12_CONIM  (Q5K0B9    ), 
CO12_CONST  (Q5K0D8    ), CO12_CONTE  (Q9XZK9    ), CO13_CONIM  (Q5K0C0    ), 
CO13_CONST  (Q9XZK2    ), CO13_CONTE  (Q9XZL0    ), CO14_CONST  (Q9XZK3    ), 
CO14_CONTE  (Q9XZL1    ), CO15B_CONTE (Q9U654    ), CO15_CONST  (Q9XZK4    ), 
CO15_CONTE  (Q9XZL2    ), CO161_CONST (Q9XZL4    ), CO161_CONTE (Q3YEF3    ), 
CO162_CONST (Q9XZL5    ), CO164_CONAH (P0C8V8    ), CO164_CONVC (P69761    ), 
CO165_CONAH (P0C8V9    ), CO166_CONST (P0C831    ), CO167_CONMR (Q3YED6    ), 
CO16A_CONCT (P58917    ), CO16A_CONGE (P01522    ), CO16A_CONPL (Q9XYZ0    ), 
CO16A_CONST (P28880    ), CO16B_CONST (P28881    ), CO16D_CONCT (P58920    ), 
CO16_CONST  (Q5K0D3    ), CO16_CONTE  (Q9XZL3    ), CO17A_CONMA (P05484    ), 
CO194_CONTE (Q9U647    ), CO19_CONST  (Q5K0D2    ), CO1X1_CONTE (Q9XZK8    ), 
CO6A_CONPE  (P56712    ), CO6A_CONRA  (P58914    ), CO6A_CONTU  (P58915    ), 
CO6B_CONCT  (P58918    ), CO6B_CONPE  (P56713    ), CO6C_CONCT  (P58919    ), 
CO7AB_CONGE (P05483    ), CO7A_CONCN  (P58916    ), CO7B_CONMA  (P05485    ), 
CO7C_CONMA  (P37300    ), CO7D_CONMA  (Q26350    ), CO7_CONTE   (P56714    ), 
CO8_CONBU   (P0CY66    ), CU6B_CONPB  (P0DMA2    ), O1618_CONAE (Q9BP78    ), 
O162_CONAE  (Q9BH84    ), O163_CONAE  (Q9BP99    ), O164_CONTE  (Q9U645    ), 
O168_CONVE  (Q9BPA5    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CO141_CONTE (Q9U651    ), CO142_CONTE (Q9U650    ), CO67_CONST  (P0C832    )

		
UniProtKB/Swiss-Prot
False positive sequences
8 sequences

CO163_CONAH (P0C8V7    ), CO16E_CONST (Q9XZK5    ), CO6A_CONCN  (P69750    ), 
CO6A_CONMA  (P69753    ), CO6A_CONSE  (P69757    ), CO6B_CONMA  (P69754    ), 
CO6C_CONMA  (P69755    ), CO6D_CONMA  (P69756    )
» more

PDB
[Detailed view]
12 PDB

1CNN; 1DW4; 1DW5; 1F3K; 1FEO; 1FYG; 1MVI; 1MVJ; 1OMG; 1OMN; 1TT3; 1TTK

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