Entry: PS60004

General information about the entry

Entry name [info] OMEGA_CONOTOXIN
Accession [info] PS60004
Entry type [info] PATTERN
Date [info] OCT-2004 (CREATED); OCT-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC60004

Name and characterization of the entry

Description [info] Omega-conotoxin family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.

Total number of hits 66 in 66 different sequences
Number of true positive hits 58 in 58 different sequences
Number of 'unknown' hits 0
Number of false positive hits 8 in 8 different sequences
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 87.88 %
Recall (true positives / (true positives + false negatives)) 95.08 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 13
Site [info] disulfide at position 14
Site [info] disulfide at position 18
Site [info] disulfide at position 23
Version [info] 1

Cross-references [info]

True positive sequences
58 sequences

CM7J_CONCN  (P0DKQ6), CO111_CONTE (Q9U648), CO112_CONST (Q5K0D6), 
CO115_CONST (Q5K0D5), CO12A_CONPL (Q9XYZ1), CO12_CONIM  (Q5K0B9), 
CO12_CONST  (Q5K0D8), CO12_CONTE  (Q9XZK9), CO13_CONIM  (Q5K0C0), 
CO13_CONST  (Q9XZK2), CO13_CONTE  (Q9XZL0), CO14_CONST  (Q9XZK3), 
CO14_CONTE  (Q9XZL1), CO15B_CONTE (Q9U654), CO15_CONST  (Q9XZK4), 
CO15_CONTE  (Q9XZL2), CO161_CONST (Q9XZL4), CO161_CONTE (Q3YEF3), 
CO162_CONST (Q9XZL5), CO164_CONAH (P0C8V8), CO164_CONVC (P69761), 
CO165_CONAH (P0C8V9), CO166_CONST (P0C831), CO167_CONMR (Q3YED6), 
CO16A_CONCT (P58917), CO16A_CONGE (P01522), CO16A_CONPL (Q9XYZ0), 
CO16A_CONST (P28880), CO16B_CONST (P28881), CO16D_CONCT (P58920), 
CO16_CONST  (Q5K0D3), CO16_CONTE  (Q9XZL3), CO17A_CONMA (P05484), 
CO194_CONTE (Q9U647), CO19_CONST  (Q5K0D2), CO1X1_CONTE (Q9XZK8), 
CO6A_CONPE  (P56712), CO6A_CONRA  (P58914), CO6A_CONTU  (P58915), 
CO6B_CONCT  (P58918), CO6B_CONPE  (P56713), CO6C_CONCT  (P58919), 
CO7AB_CONGE (P05483), CO7A_CONCN  (P58916), CO7B_CONMA  (P05485), 
CO7C_CONMA  (P37300), CO7D_CONMA  (Q26350), CO7_CONTE   (P56714), 
CO8_CONBU   (P0CY66), CU6B_CONPB  (P0DMA2), O1618_CONAE (Q9BP78), 
O162_CONAE  (Q9BH84), O163_CONAE  (Q9BP99), O164_CONTE  (Q9U645), 
O168_CONVE  (Q9BPA5)
» More

False negative sequences
3 sequences

CO141_CONTE (Q9U651), CO142_CONTE (Q9U650), CO67_CONST  (P0C832)

False positive sequences
8 sequences

CO163_CONAH (P0C8V7), CO16E_CONST (Q9XZK5), CO6A_CONCN  (P69750), 
CO6A_CONMA  (P69753), CO6A_CONSE  (P69757), CO6B_CONMA  (P69754), 
CO6C_CONMA  (P69755), CO6D_CONMA  (P69756)
» More

[Detailed view]
12 PDB

1CNN; 1DW4; 1DW5; 1F3K; 1FEO; 1FYG; 1MVI; 1MVJ; 1OMG; 1OMN; 1TT3; 1TTK

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