Entry: PS60004

General information about the entry

Entry name [info] OMEGA_CONOTOXIN
Accession [info] PS60004
Entry type [info] PATTERN
Date [info] OCT-2004 (CREATED); OCT-2004 (DATA UPDATE); MAR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC60004

Name and characterization of the entry

Description [info] Omega-conotoxin family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_05 which contains 548'454 sequence entries.

Total number of hits 66 in 66 different sequences
Number of true positive hits 58 in 58 different sequences
Number of 'unknown' hits
Number of false positive hits 8 in 8 different sequences
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 87.88 %
Recall (true positives / (true positives + false negatives)) 95.08 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 13
Site [info] disulfide at position 14
Site [info] disulfide at position 18
Site [info] disulfide at position 23
Version [info] 1

Cross-references [info]

True positive sequences
58 sequences

CM7J_CONCN  (P0DKQ6), CO111_CONTE (Q9U648), CO112_CONST (Q5K0D6), 
CO115_CONST (Q5K0D5), CO12A_CONPL (Q9XYZ1), CO12_CONIM  (Q5K0B9), 
CO12_CONST  (Q5K0D8), CO12_CONTE  (Q9XZK9), CO13_CONIM  (Q5K0C0), 
CO13_CONST  (Q9XZK2), CO13_CONTE  (Q9XZL0), CO14_CONST  (Q9XZK3), 
CO14_CONTE  (Q9XZL1), CO15B_CONTE (Q9U654), CO15_CONST  (Q9XZK4), 
CO15_CONTE  (Q9XZL2), CO161_CONST (Q9XZL4), CO161_CONTE (Q3YEF3), 
CO162_CONST (Q9XZL5), CO164_CONAH (P0C8V8), CO164_CONVC (P69761), 
CO165_CONAH (P0C8V9), CO166_CONST (P0C831), CO167_CONMR (Q3YED6), 
CO16A_CONCT (P58917), CO16A_CONGE (P01522), CO16A_CONPL (Q9XYZ0), 
CO16A_CONST (P28880), CO16B_CONST (P28881), CO16D_CONCT (P58920), 
CO16_CONST  (Q5K0D3), CO16_CONTE  (Q9XZL3), CO17A_CONMA (P05484), 
CO194_CONTE (Q9U647), CO19_CONST  (Q5K0D2), CO1X1_CONTE (Q9XZK8), 
CO6A_CONPE  (P56712), CO6A_CONRA  (P58914), CO6A_CONTU  (P58915), 
CO6B_CONCT  (P58918), CO6B_CONPE  (P56713), CO6C_CONCT  (P58919), 
CO7AB_CONGE (P05483), CO7A_CONCN  (P58916), CO7B_CONMA  (P05485), 
CO7C_CONMA  (P37300), CO7D_CONMA  (Q26350), CO7_CONTE   (P56714), 
CO8_CONBU   (P0CY66), CU6B_CONPB  (P0DMA2), O1618_CONAE (Q9BP78), 
O162_CONAE  (Q9BH84), O163_CONAE  (Q9BP99), O164_CONTE  (Q9U645), 
O168_CONVE  (Q9BPA5)
» More

False negative sequences
3 sequences

CO141_CONTE (Q9U651), CO142_CONTE (Q9U650), CO67_CONST  (P0C832)

False positive sequences
8 sequences

CO163_CONAH (P0C8V7), CO16E_CONST (Q9XZK5), CO6A_CONCN  (P69750), 
CO6A_CONMA  (P69753), CO6A_CONSE  (P69757), CO6B_CONMA  (P69754), 
CO6C_CONMA  (P69755), CO6D_CONMA  (P69756)
» More

[Detailed view]
12 PDB

1CNN; 1DW4; 1DW5; 1F3K; 1FEO; 1FYG; 1MVI; 1MVJ; 1OMG; 1OMN; 1TT3; 1TTK

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