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| Entry: PS50016 |
General information about the entry
| Entry name [info] | ZF_PHD_2 |
| Accession [info] | PS50016 |
| Entry type [info] | MATRIX |
| Date [info] |
01-APR-2002 CREATED;
10-MAY-2017 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50016 |
| Associated ProRule [info] | PRU00146 |
Name and characterization of the entry
| Description [info] | Zinc finger PHD-type profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=54; /DISJOINT: DEFINITION=PROTECT; N1=4; N2=51; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.4800000; R2=0.0089000; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3510.1113281; R2=3.0049100; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=789; H_SCORE=5881; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=565; H_SCORE=5208; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: D=-20; I=-20; B1=-100; E1=-100; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='N'; M= -6, -2, -11, -4, -7, -14, -8, -8, -17, -6, -16, -11, 1, -19, -6, -4, 0, -2, -12, -25, -8, -7; /M: SY='N'; M= -4, -7, -24, -10, -8, -14, -15, -8, -7, -2, -9, -4, -4, -14, -6, -4, -6, -4, -6, -20, -6, -8; /M: SY='F'; M= -10, -19, -20, -23, -16, 17, -21, -12, 2, -16, 3, 3, -16, -23, -16, -13, -11, -4, 2, -9, 12, -16; /M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30; /I: I=-6; MI=-32; MD=-32; IM=-32; /M: SY='Y'; M= -6, -8, -11, -8, -5, -2, -13, -4, -9, -8, -6, -3, -7, -10, -6, -7, -5, -5, -9, -14, 2, -6; D=-6; /I: DM=-32; /M: SY='V'; M= -6, -20, -21, -24, -17, 6, -27, -21, 12, -13, 7, 5, -17, -21, -17, -14, -12, -4, 13, -18, 0, -18; /M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30; /M: SY='G'; M= -5, 2, -19, -1, -5, -17, 6, -8, -24, -6, -19, -14, 6, -18, -6, -5, 1, -8, -19, -26, -16, -5; /M: SY='E'; M= -6, 2, -24, 4, 8, -23, -9, -6, -23, 5, -19, -11, 2, -12, 6, 6, 3, -1, -18, -27, -14, 6; /I: MD=-15; /M: SY='S'; M= -1, -2, -12, -4, 1, -19, -8, -11, -16, -5, -17, -11, 0, -5, -3, -8, 7, 4, -11, -29, -17, -2; D=-2; /I: MD=-15; /M: SY='D'; M= -7, 1, -22, 3, 0, -13, -6, -3, -13, -6, -10, -9, 0, -15, -5, -5, -3, -6, -12, -18, -3, -4; D=-2; /I: MD=-15; /M: SY='D'; M= -6, 5, -17, 6, 6, -18, -8, -5, -17, 2, -15, -11, 4, -7, 2, 0, -1, -6, -15, -22, -13, 4; D=-2; /I: MD=-15; /M: M= -3, -1, -16, 0, -2, -10, -1, -8, -12, -4, -12, -8, -1, -3, -4, -7, -1, -3, -10, -10, -8, -3; D=-2; /I: I=-2; MI=0; IM=0; DM=-15; /M: SY='D'; M= -8, 6, -25, 12, 7, -23, -6, -2, -25, -5, -21, -17, 2, -2, -2, -9, 4, -1, -20, -30, -14, 2; /M: SY='G'; M= -2, 7, -25, 8, 4, -26, 12, -7, -27, -5, -22, -17, 8, -14, -4, -8, 2, -9, -21, -28, -20, 0; /M: SY='E'; M= -6, -1, -23, 1, 4, -18, -16, -11, -18, -1, -15, -12, -3, 0, -2, -5, -4, -6, -16, -24, -14, 1; /M: SY='L'; M= -10, -25, -14, -30, -22, 10, -27, -18, 14, -21, 18, 17, -21, -25, -17, -17, -18, -7, 9, -14, 1, -20; /M: SY='I'; M= -8, -27, -21, -30, -22, 3, -30, -19, 24, -22, 21, 19, -25, -25, -18, -19, -20, -9, 20, -15, -1, -21; /M: SY='Q'; M= -7, -9, -14, -11, -1, -8, -19, -7, -11, -8, -8, -5, -7, -18, 4, -7, -1, -1, -11, -20, -1, 1; /M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30; /M: SY='D'; M= -8, 22, -24, 28, 11, -32, -4, -2, -30, 0, -25, -20, 13, -12, 4, -5, 1, -8, -25, -32, -18, 7; /I: I=-8; MI=0; MD=-30; IM=0; DM=-30; /M: SY='B'; M= -7, 0, -21, 0, -4, -16, -4, -8, -18, -3, -13, -9, -1, -17, -7, -5, -4, -5, -13, -23, -8, -6; /M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30,-120, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30; /I: MD=-29; /M: SY='D'; M= -9, 6, -20, 9, 3, -24, -2, -6, -26, 1, -22, -15, 4, -10, 1, -1, -2, -9, -22, -25, -14, 1; D=-6; /I: I=-8; MI=-29; MD=-29; IM=-29; DM=-29; /M: SY='R'; M= -12, 2, -25, 3, 6, -21, -17, 1, -22, 11, -18, -11, 3, -15, 7, 21, -2, -4, -17, -25, -9, 5; D=-6; /I: DM=-29; /M: SY='W'; M= -2, -17, -30, -18, -14, -11, -5, -17, -18, -9, -20, -14, -14, -11, -11, -13, -8, -10, -17, 29, -3, -11; /M: SY='F'; M= -14, -25, -21, -29, -23, 30, -24, -9, 2, -19, 3, 2, -20, -28, -21, -16, -17, -10, 2, 7, 25, -21; /M: SY='H'; M= -20, 0, -30, 0, 0, -20, -20, 100, -30, -10, -20, 0, 10, -20, 10, 0, -10, -20, -30, -30, 20, 0; /M: SY='Q'; M= -6, -11, -24, -12, -3, -17, -16, -10, -7, -4, -8, -1, -8, -7, 4, -2, -3, -3, -8, -24, -11, -1; /M: M= -7, -2, -24, -3, -1, -11, -15, -6, -13, 0, -13, -8, -1, -16, -4, -4, -3, -3, -10, -21, -3, -3; /M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30; /M: SY='L'; M= -3, -21, -16, -24, -16, 3, -25, -14, 10, -19, 15, 8, -20, -24, -16, -17, -13, -3, 10, -18, 3, -17; /M: SY='G'; M= -5, -3, -25, -4, -3, -23, 2, -10, -17, -6, -15, -7, 0, -11, 2, -7, -1, -6, -16, -26, -16, -1; /M: SY='P'; M= -12, -11, -28, -10, -7, -6, -23, -9, -7, -9, -6, -5, -10, 3, -11, -9, -12, -8, -9, -19, -7, -10; /M: SY='P'; M= -2, -6, -25, -6, -1, -18, -10, -12, -17, -5, -21, -14, -3, 8, -5, -9, 3, 0, -16, -20, -14, -4; /M: M= -5, -8, -25, -7, -2, -13, -14, -10, -11, -3, -8, -5, -8, -7, -4, -6, -8, -8, -10, -21, -7, -4; /M: SY='E'; M= -8, -4, -25, -3, 4, -15, -20, -11, -11, 1, -10, -8, -3, -7, -3, 1, -4, -3, -9, -26, -12, -1; /I: I=-4; MI=0; MD=-15; IM=0; /M: SY='S'; M= -1, -1, -11, 0, 1, -10, -5, -6, -8, -3, -9, -6, -1, 1, -2, -5, 3, 1, -7, -16, -8, -1; D=-1; /I: DM=-15; /M: M= -2, -5, -16, -6, -3, -10, -7, -9, -6, -4, -5, -4, -4, -6, -2, -5, -4, -4, -7, -10, -7, -3; D=-1; /I: DM=-15; /M: SY='A'; M= 1, -4, -19, -5, 0, -15, -10, -10, -10, -3, -7, -5, -5, -8, -3, -5, -3, -4, -8, -18, -11, -2; D=-1; /I: DM=-15; /M: M= -2, -2, -22, -2, -2, -18, -13, -12, -6, -6, -11, -7, -2, 0, -7, -11, -3, -5, -6, -25, -15, -6; D=-1; /I: DM=-15; /M: SY='P'; M= -6, -9, -29, -7, 1, -20, -12, -10, -17, -1, -18, -11, -7, 9, -2, -5, -5, -8, -18, -16, -13, -2; /M: SY='D'; M= -10, 5, -27, 9, 9, -22, -11, -8, -23, 3, -20, -15, 3, -1, 1, 0, 0, -4, -21, -28, -16, 5; /M: SY='G'; M= -5, -4, -24, -3, 0, -17, 1, -10, -17, -6, -15, -10, -1, -16, -5, -5, 0, -6, -12, -25, -14, -3; /M: SY='B'; M= -6, -2, -25, -2, -3, -21, -4, -8, -16, -3, -15, -8, -2, -11, -5, -5, -4, -7, -12, -24, -14, -4; /M: SY='W'; M= -19, -33, -39, -35, -26, 25, -24, -20, -10, -19, -8, -10, -30, -29, -21, -17, -31, -21, -18, 86, 32, -20; /M: SY='L'; M= -9, -18, -16, -21, -14, -1, -25, -12, 2, -10, 3, 2, -14, -22, -9, -6, -9, -4, 2, -16, 3, -13; /M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30; /M: SY='P'; M= -8, -8, -29, -7, -1, -22, -13, -12, -16, -1, -19, -12, -6, 13, -4, -3, -4, -4, -15, -24, -17, -5; /M: SY='R'; M= -7, -6, -21, -8, -2, -12, -11, -5, -15, 1, -10, -7, -2, -19, -4, 5, -7, -8, -12, -22, -7, -4; /M: SY='C'; M= -10, -19, 115, -29, -29, -20, -30, -26, -30, -29, -20, -19, -19, -39, -29, -29, -10, -10, -11, -49, -28, -29; /M: SY='K'; M= -5, 0, -22, 0, 1, -19, -15, -9, -14, 2, -11, -5, -1, -15, 2, 1, -1, 1, -10, -27, -12, 1; /M: SY='K'; M= -8, -3, -14, -6, 0, -15, -18, -9, -15, 1, -17, -10, 1, -6, -3, 0, -2, -4, -14, -27, -12, -2; /M: SY='K'; M= -5, -7, -4, -9, -1, -19, -17, -6, -20, 2, -18, -9, -6, -12, -2, 2, -2, -5, -13, -29, -13, -3; /I: E1=0; IE=-105; DE=-105;» more |
Post-processing [info]
| COMPETES_HIT_WITH | PS51805 |
Numerical results [info]
| Total number of hits | 442 in 339 different sequences |
| Number of true positive hits | 437 in 334 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 5 in 5 different sequences |
| Number of false negative sequences | 135 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 98.87 % |
| Recall (true positives / (true positives + false negatives)) | 76.40 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | window20_shuffled |
| Author [info] | K_Hofmann |
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 6 |
| Feature key [info] | ZN_FING |
| Feature description [info] | PHD-type |
| Version [info] | 6 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
334 sequences
AF10_HUMAN (P55197 ), AF10_MOUSE (O54826 ), AF17_HUMAN (P55198 ), AIRE_HUMAN (O43918 ), AIRE_MOUSE (Q9Z0E3 ), ALFIN_MEDSA (Q40359 ), ALFL1_ARATH (Q9FFF5 ), ALFL1_ORYSI (A2Y0Q2 ), ALFL1_ORYSJ (Q75IR6 ), ALFL2_ARATH (Q9SRM4 ), ALFL2_ORYSI (B8B8I3 ), ALFL2_ORYSJ (Q8H383 ), ALFL3_ARATH (Q9M2B4 ), ALFL3_ORYSI (B8AMA8 ), ALFL3_ORYSJ (Q84TV4 ), ALFL4_ARATH (O81488 ), ALFL4_ORYSI (A2XTW9 ), ALFL4_ORYSJ (Q7XUW3 ), ALFL5_ARATH (Q5XEM9 ), ALFL5_ORYSI (A2Y4R8 ), ALFL5_ORYSJ (Q60DW3 ), ALFL6_ARATH (Q8S8M9 ), ALFL6_ORYSI (A2WXR5 ), ALFL6_ORYSJ (Q7F2Z1 ), ALFL7_ARATH (Q8LA16 ), ALFL7_ORYSI (B8ADZ3 ), ALFL7_ORYSJ (Q6Z7F4 ), ALFL8_ORYSI (B8BJV8 ), ALFL8_ORYSJ (Q2R837 ), ALFL9_ORYSI (B8B8C5 ), ALFL9_ORYSJ (Q6YTY3 ), ATG35_KOMPG (C4QVX6 ), ATX1_ARATH (Q9C5X4 ), ATX2_ARATH (P0CB22 ), ATX3_ARATH (Q9M364 ), ATX4_ARATH (Q9SUE7 ), ATX5_ARATH (Q8GZ42 ), ATXR5_ARATH (Q8VZJ1 ), ATXR5_RICCO (B9RU15 ), ATXR6_ARATH (Q9FNE9 ), BAZ1A_HUMAN (Q9NRL2 ), BAZ1A_MOUSE (O88379 ), BAZ1A_XENLA (Q8UVR5 ), BAZ1B_DANRE (A2BIL7 ), BAZ1B_HUMAN (Q9UIG0 ), BAZ1B_MOUSE (Q9Z277 ), BAZ1B_XENLA (A8DZJ1 ), BAZ2A_HUMAN (Q9UIF9 ), BAZ2A_MOUSE (Q91YE5 ), BAZ2A_XENLA (B7ZS37 ), BAZ2B_CHICK (Q9DE13 ), BAZ2B_HUMAN (Q9UIF8 ), BAZ2B_MOUSE (A2AUY4 ), BAZ2_CAEEL (Q23590 ), BPTF_HUMAN (Q12830 ), BRD1_HUMAN (O95696 ), BRD1_MOUSE (G5E8P1 ), BRDH_DROME (Q7JVP4 ), BRPF1_HUMAN (P55201 ), BRPF1_MOUSE (B2RRD7 ), BRPF3_HUMAN (Q9ULD4 ), BRPF3_MOUSE (B2KF05 ), BYE1_CANGB (Q6FJ00 ), BYE1_DEBHA (Q6BNY5 ), BYE1_PICGU (A5DDB7 ), BYE1_SCHPO (Q9Y7V2 ), BYE1_YEAS7 (A6ZZW1 ), BYE1_YEAST (P36106 ), C3H19_ARATH (Q9SIV5 ), C3H44_ARATH (Q9SD34 ), CHD3_CAEEL (Q22516 ), CHD3_DROME (O16102 ), CHD3_HUMAN (Q12873 ), CHD4_HUMAN (Q14839 ), CHD4_MOUSE (Q6PDQ2 ), CHD5_HUMAN (Q8TDI0 ), CHD5_MOUSE (A2A8L1 ), CHD5_RAT (D3ZD32 ), CHDM_DROME (O97159 ), CHR4_ARATH (F4KBP5 ), CTI6_YEAST (Q08923 ), CXXC1_BOVIN (Q5EA28 ), CXXC1_DROME (Q9W352 ), CXXC1_HUMAN (Q9P0U4 ), CXXC1_MOUSE (Q9CWW7 ), DIDO1_HUMAN (Q9BTC0 ), DIDO1_MOUSE (Q8C9B9 ), DPF1_CHICK (P58267 ), DPF1_HUMAN (Q92782 ), DPF1_MOUSE (Q9QX66 ), DPF1_RAT (P56163 ), DPF3_CHICK (P58270 ), DPF3_DANRE (A9LMC0 ), DPF3_HUMAN (Q92784 ), DPF3_MOUSE (P58269 ), DPFF1_CAEEL (Q09477 ), EBS_ARATH (F4JL28 ), ECM5_YEAST (Q03214 ), EHD3_ORYSJ (Q6ZJM9 ), FGT1_ARATH (F4IF36 ), FXL19_HUMAN (Q6PCT2 ), FXL19_MOUSE (Q6PB97 ), HAT31_ARATH (Q04996 ), HAZ1_ORYSJ (Q8H991 ), HOX1A_MAIZE (P46605 ), IDM1_ARATH (F4IXE7 ), ING1_ARATH (Q9LIQ6 ), ING1_DICDI (Q54PN9 ), ING1_HUMAN (Q9UK53 ), ING1_MOUSE (Q9QXV3 ), ING1_SCHPO (O42871 ), ING2_ARATH (B3H615 ), ING2_HUMAN (Q9H160 ), ING2_MOUSE (Q9ESK4 ), ING2_SCHPO (O74736 ), ING3_CHICK (Q5ZK36 ), ING3_HUMAN (Q9NXR8 ), ING3_MOUSE (Q8VEK6 ), ING3_PONAB (Q5RBA1 ), ING3_RAT (Q498T3 ), ING3_XENLA (Q7ZX31 ), ING3_XENTR (Q66KD5 ), ING4_BOVIN (Q3T095 ), ING4_CHICK (Q5ZKY4 ), ING4_HUMAN (Q9UNL4 ), ING4_MOUSE (Q8C0D7 ), ING5_DROME (Q9VJY8 ), ING5_HUMAN (Q8WYH8 ), ING5_MOUSE (Q9D8Y8 ), INT12_BOVIN (Q32LL5 ), INT12_DANRE (Q6IQU7 ), INT12_DROME (Q9VBB3 ), INT12_HUMAN (Q96CB8 ), INT12_MACFA (Q8WNV2 ), INT12_MOUSE (Q9D168 ), INT12_PONAB (Q5RCV7 ), INT12_RAT (Q68FR3 ), INT12_XENLA (Q6DJM6 ), INT12_XENTR (Q0V9U1 ), JADE1_BOVIN (Q5E9T7 ), JADE1_DANRE (Q803A0 ), JADE1_HUMAN (Q6IE81 ), JADE1_MOUSE (Q6ZPI0 ), JADE1_XENLA (Q6GQJ2 ), JADE2_HUMAN (Q9NQC1 ), JADE2_MOUSE (Q6ZQF7 ), JADE3_DANRE (Q7ZVP1 ), JADE3_HUMAN (Q92613 ), JADE3_MOUSE (Q6IE82 ), JADE3_XENTR (Q0P4S5 ), JHD1_ASPFU (Q4WHB7 ), JHD1_CANAL (Q5A847 ), JHD1_DEBHA (Q6BXJ4 ), JHD1_EMENI (Q5AW75 ), JHD1_YARLI (Q6C423 ), JHD2_YEAST (P47156 ), KAT6A_HUMAN (Q92794 ), KAT6A_MOUSE (Q8BZ21 ), KAT6A_RAT (Q5TKR9 ), KAT6B_HUMAN (Q8WYB5 ), KAT6B_MACFA (Q8WML3 ), KAT6B_MOUSE (Q8BRB7 ), KD5BB_DANRE (Q6IQX0 ), KDM2A_HUMAN (Q9Y2K7 ), KDM2A_MOUSE (P59997 ), KDM2A_XENTR (Q5U263 ), KDM2B_HUMAN (Q8NHM5 ), KDM2B_MOUSE (Q6P1G2 ), KDM2B_XENLA (Q640I9 ), KDM5A_HUMAN (P29375 ), KDM5A_MOUSE (Q3UXZ9 ), KDM5B_CHICK (Q5F3R2 ), KDM5B_HUMAN (Q9UGL1 ), KDM5B_MOUSE (Q80Y84 ), KDM5C_CANLF (Q38JA7 ), KDM5C_HUMAN (P41229 ), KDM5C_MOUSE (P41230 ), KDM5C_PIG (A1YVX4 ), KDM5D_CANLF (Q30DN6 ), KDM5D_HUMAN (Q9BY66 ), KDM5D_MOUSE (Q62240 ), KDM5D_PANTR (Q5XUN4 ), KDM5_CAEBR (Q61T02 ), KDM5_CAEEL (Q23541 ), KDM5_DROME (Q9VMJ7 ), KDM7A_DANRE (Q5RHD1 ), KDM7A_HUMAN (Q6ZMT4 ), KDM7A_MOUSE (Q3UWM4 ), KDM7A_XENTR (Q08D35 ), KDM7B_DANRE (P0CF52 ), KMT2A_HUMAN (Q03164 ), KMT2A_MOUSE (P55200 ), KMT2B_HUMAN (Q9UMN6 ), KMT2B_MOUSE (O08550 ), KMT2C_HUMAN (Q8NEZ4 ), KMT2C_MOUSE (Q8BRH4 ), KMT2D_HUMAN (O14686 ), KMT2D_MOUSE (Q6PDK2 ), KMT2E_HUMAN (Q8IZD2 ), KMT2E_MOUSE (Q3UG20 ), LE418_CAEEL (G5EBZ4 ), LID2_SCHPO (Q9HDV4 ), LIN49_CAEEL (Q20318 ), LIN59_CAEEL (O44757 ), MBD9_ARATH (Q9SGH2 ), MIT1_SCHPO (Q9P793 ), MLO2_SCHPO (Q09329 ), MSC1_SCHPO (Q9UT79 ), MTF2_HUMAN (Q9Y483 ), MTF2_MOUSE (Q02395 ), MTF2_PONAB (Q5R7T9 ), NFXL1_ARATH (Q9SY59 ), NSD1_HUMAN (Q96L73 ), NSD1_MOUSE (O88491 ), NSD2_HUMAN (O96028 ), NSD2_MOUSE (Q8BVE8 ), NSD3_HUMAN (Q9BZ95 ), NSD3_MOUSE (Q6P2L6 ), NSD_DROME (Q8MT36 ), NTO1_SCHPO (O74759 ), NTO1_YEAST (Q12311 ), NU301_CAEEL (Q6BER5 ), NU301_DROME (Q9W0T1 ), ORC1A_ARATH (Q710E8 ), ORC1B_ARATH (Q9SU24 ), ORC1_ORYSJ (Q5SMU7 ), ORTH2_ARATH (Q8VYZ0 ), PCL_DROME (Q24459 ), PF21A_HUMAN (Q96BD5 ), PF21A_MOUSE (Q6ZPK0 ), PF21B_HUMAN (Q96EK2 ), PF21B_MOUSE (Q8C966 ), PHF10_BOVIN (Q2T9V9 ), PHF10_DANRE (Q6NWE1 ), PHF10_HUMAN (Q8WUB8 ), PHF10_MOUSE (Q9D8M7 ), PHF10_RAT (Q4V7A6 ), PHF10_XENLA (Q63ZP1 ), PHF12_HUMAN (Q96QT6 ), PHF12_MOUSE (Q5SPL2 ), PHF14_DANRE (A0A286Y9D1), PHF14_HUMAN (O94880 ), PHF14_MOUSE (Q9D4H9 ), PHF19_MOUSE (Q9CXG9 ), PHF1_HUMAN (O43189 ), PHF1_MOUSE (Q9Z1B8 ), PHF1_SCHPO (P87233 ), PHF2_DANRE (Q6P949 ), PHF2_DICLA (E6ZGB4 ), PHF2_HUMAN (O75151 ), PHF2_MOUSE (Q9WTU0 ), PHF2_SCHPO (Q09908 ), PHF3_HUMAN (Q92576 ), PHF8_DANRE (P0CH95 ), PHF8_HUMAN (Q9UPP1 ), PHF8_MOUSE (Q80TJ7 ), PHO23_YEAST (P50947 ), PHRF1_HUMAN (Q9P1Y6 ), PHRF1_MOUSE (A6H619 ), PHRF1_RAT (Q63625 ), PKL_ARATH (Q9S775 ), PRH_ARATH (P48785 ), PRH_PETCR (P48786 ), PTM_ARATH (F4JYC8 ), PYGO1_HUMAN (Q9Y3Y4 ), PYGO1_MOUSE (Q9D0P5 ), PYGO2_HUMAN (Q9BRQ0 ), PYGO_DROME (Q9V9W8 ), RCO1_YEAST (Q04779 ), REQUA_XENLA (Q9W638 ), REQUB_XENLA (Q9W636 ), REQU_CHICK (P58268 ), REQU_HUMAN (Q92785 ), REQU_MOUSE (Q61103 ), RNO_DROME (Q7YZH1 ), RNO_DROPS (Q29EQ3 ), RSF1_HUMAN (Q96T23 ), SAYP_DROME (Q9VWF2 ), SCC2_ARATH (A5HEI1 ), SET1_PLAF7 (C6KTD2 ), SET3_YEAST (P36124 ), SET4_YEAST (P42948 ), SHL_ARATH (Q9FEN9 ), SNT2_YEAST (P53127 ), SP110_HUMAN (Q9HB58 ), SP140_HUMAN (Q13342 ), SP14L_HUMAN (Q9H930 ), SPP1_SCHPO (O74508 ), SPP1_YEAST (Q03012 ), TAF3_CHICK (Q5F489 ), TAF3_HUMAN (Q5VWG9 ), TAF3_MOUSE (Q5HZG4 ), TAF3_XENLA (Q5EAW9 ), TIF1A_HUMAN (O15164 ), TIF1A_MOUSE (Q64127 ), TIF1B_HUMAN (Q13263 ), TIF1B_MOUSE (Q62318 ), TIF1B_RAT (O08629 ), TRI33_DANRE (Q6E2N3 ), TRI33_HUMAN (Q9UPN9 ), TRI33_MOUSE (Q99PP7 ), TRI33_XENLA (Q56R14 ), TRI66_HUMAN (O15016 ), TRI66_MOUSE (Q924W6 ), TRX1_ORYSJ (Q6K431 ), TRX_DROME (P20659 ), TRX_DROVI (Q24742 ), UBR7_DICDI (Q54DV0 ), UHRF1_BOVIN (A7E320 ), UHRF1_DANRE (E7EZF3 ), UHRF1_HUMAN (Q96T88 ), UHRF1_MOUSE (Q8VDF2 ), UHRF1_RAT (Q7TPK1 ), UHRF1_XENLA (B6CHA3 ), UHRF1_XENTR (F6UA42 ), UHRF2_HUMAN (Q96PU4 ), UHRF2_MOUSE (Q7TMI3 ), Y3228_ARATH (Q5PNS0 ), Y8158_DICDI (Q55FD6 ), YA27_SCHPO (Q09698 ), YAC5_SCHPO (Q09819 ), YNG2_ASHGO (Q757W2 ), YNG2_CANAL (Q5AHB8 ), YNG2_CANGB (Q6FSB1 ), YNG2_DEBHA (Q6BNL6 ), YNG2_KLULC (Q6CXN0 ), YNG2_YARLI (Q6C5V7 ), YNG2_YEAST (P38806 ), YQF7_SCHPO (O94400 ), ZFP1_CAEEL (P34447 ), ZMY11_HUMAN (Q15326 ), ZMY11_MOUSE (Q8R5C8 ), ZMYD8_DROME (Q7KRS9 ), ZMYD8_HUMAN (Q9ULU4 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
135 sequences
ARID4_ARATH (Q6NQ79 ), ASH1L_HUMAN (Q9NR48 ), ASH1L_MOUSE (Q99MY8 ), ASH1_DROME (Q9VW15 ), ASH2L_HUMAN (Q9UBL3 ), ASH2L_MOUSE (Q91X20 ), ASH2_CAEEL (G5EFZ3 ), ASH2_DROME (Q94545 ), ASH2_SCHPO (O60070 ), ASHR3_ARATH (Q949T8 ), ASXL1_HUMAN (Q8IXJ9 ), ASXL1_MOUSE (P59598 ), ASXL2_CHICK (Q5ZM88 ), ASXL2_HUMAN (Q76L83 ), ASXL2_MOUSE (Q8BZ32 ), ASXL3_HUMAN (Q9C0F0 ), ASXL3_MOUSE (Q8C4A5 ), ASX_DROME (Q9V727 ), BYE1_YARLI (Q6C0K9 ), CBFA_DICDI (O97101 ), CTI6_SCHPO (Q1MTR4 ), EBSL_ARATH (F4JGB7 ), EDM2_ARATH (F4K3G5 ), G2E3_CHICK (Q5F4A1 ), G2E3_HUMAN (Q7L622 ), G2E3_MACFA (Q4R9C4 ), G2E3_MOUSE (Q5RJY2 ), HAC12_ARATH (Q9FWQ5 ), HAC1_ARATH (Q9C5X9 ), HAC2_ARATH (Q9FYH1 ), HAC4_ARATH (Q9LG11 ), HAC5_ARATH (Q9LE42 ), HACL1_ORYSJ (Q6YXY2 ), HACL2_ORYSJ (Q5Z8V7 ), HACL3_ORYSJ (Q9XHY7 ), HOP1_SCHPO (Q9P7P2 ), JHD1_ASHGO (Q75AL5 ), JHD1_CRYNB (P0CO41 ), JHD1_CRYNJ (P0CO40 ), JHD1_KLULC (Q6CIC9 ), JHD1_USTMA (Q4P5U1 ), JHD1_YEAST (P40034 ), JMJ17_ARATH (F4I240 ), JMJ24_ARATH (F4HZD1 ), KDM4A_HUMAN (O75164 ), KDM4A_MOUSE (Q8BW72 ), KDM4A_PONAB (Q5RD88 ), KDM4B_HUMAN (O94953 ), KDM4B_MOUSE (Q91VY5 ), KDM4C_HUMAN (Q9H3R0 ), KDM4C_MOUSE (Q8VCD7 ), KDM7_CAEEL (Q9GYI0 ), LSY13_CAEEL (A3QMD7 ), MES4_CAEEL (Q9NH52 ), MMD1_ARATH (Q7X6Y7 ), MS1_ARATH (Q9FMS5 ), OBE1_ARATH (Q9S736 ), OBE2_ARATH (Q9LUB7 ), OBE3_ARATH (Q94B71 ), OBE4_ARATH (Q84TI3 ), ORTH1_ARATH (Q9FKA7 ), ORTH3_ARATH (Q9FVS2 ), ORTH4_ARATH (Q9C8E1 ), ORTH5_ARATH (Q680I0 ), P20L1_HUMAN (A8MW92 ), P20L1_MOUSE (Q8CCJ9 ), P20L1_RAT (Q4V9H5 ), PF23A_DANRE (Q5BJ10 ), PF23A_XENLA (Q5HZN9 ), PF23B_DANRE (Q7SXB5 ), PF23B_XENLA (Q0IHB0 ), PH11A_MOUSE (Q8BVM9 ), PH11L_RAT (Q5I0J8 ), PHF11_BOVIN (Q2HJ93 ), PHF11_HUMAN (Q9UIL8 ), PHF11_MOUSE (A6H5X4 ), PHF11_RAT (Q5I0E2 ), PHF13_HUMAN (Q86YI8 ), PHF13_MOUSE (Q8K2W6 ), PHF19_HUMAN (Q5T6S3 ), PHF20_HUMAN (Q9BVI0 ), PHF20_MOUSE (Q8BLG0 ), PHF23_BOVIN (A5D962 ), PHF23_HUMAN (Q9BUL5 ), PHF23_MOUSE (Q8BSN5 ), PHF23_RAT (Q6AY75 ), PHF23_XENTR (Q5U5E5 ), PHF24_HUMAN (Q9UPV7 ), PHF24_MOUSE (Q80TL4 ), PHF24_PONAB (Q5R4R7 ), PHF6_BOVIN (Q08DR0 ), PHF6_HUMAN (Q8IWS0 ), PHF6_MOUSE (Q9D4J7 ), PHF6_PONAB (Q5R5Z2 ), PHF7_HUMAN (Q9BWX1 ), PHF7_MOUSE (Q9DAG9 ), PHF7_RAT (Q6AXW4 ), PTC1_ORYSJ (Q67V61 ), PVIP_NICBE (Q84N38 ), PVIP_PEA (Q84N37 ), RAG2_CHICK (P25022 ), RAG2_DANRE (O13034 ), RAG2_HUMAN (P55895 ), RAG2_MOUSE (P21784 ), RAG2_ONCMY (Q91193 ), RAG2_RABIT (P34089 ), RAG2_XENLA (Q91830 ), RAI1_HUMAN (Q7Z5J4 ), RAI1_MOUSE (Q61818 ), SET26_CAEEL (Q9U263 ), SET3_SCHPO (Q10362 ), SET9_CAEEL (O44498 ), SETVS_PLAF7 (Q8IE95 ), SHPRH_HUMAN (Q149N8 ), SHPRH_MOUSE (Q7TPQ3 ), SIZ1_ARATH (Q680Q4 ), SIZ1_ORYSJ (Q6L4L4 ), SIZ2_ORYSJ (Q6ASW7 ), SNT2_SCHPO (Q10077 ), TCF19_HUMAN (Q9Y242 ), TCF19_MACMU (Q5TM48 ), TCF19_PANTR (Q7YR48 ), TCF19_PIG (Q9TSV4 ), TCF20_HUMAN (Q9UGU0 ), TCF20_MOUSE (Q9EPQ8 ), TTA1_ORYSJ (Q10PC5 ), UBR7_HUMAN (Q8N806 ), UBR7_MOUSE (Q8BU04 ), VIL1_ARATH (Q9LHF5 ), VIL2_ARATH (Q9SUM4 ), VIL3_ARATH (Q5BPT4 ), VIN3_ARATH (Q9FIE3 ), Y1342_ARATH (Q9C810 ), Y2181_ARATH (Q9ZUA9 ), YNG1_YEAST (Q08465 )» more |
| UniProtKB/Swiss-Prot False positive sequences |
5 sequences
FAP1H_SCHPO (O74853 ), NFX1_BOVIN (A6QLA0 ), NFX1_DICDI (Q54BK0 ), NFX1_HUMAN (Q12986 ), NFX1_MOUSE (B1AY10 )» more |
| PDB [Detailed view] |
262 PDB
1F62; 1FP0; 1MM2; 1MM3; 1WE9; 1WEE; 1WEM; 1WEN; 1WEP; 1WES; 1WEU; 1WEV; 1WEW; 1WIL; 1X4I; 1XWH; 2DX8; 2E6R; 2E6S; 2F6J; 2F6N; 2FSA; 2FUI; 2FUU; 2G6Q; 2JMI; 2JMJ; 2K16; 2K17; 2K1J; 2KE1; 2KFT; 2KGG; 2KGI; 2KU3; 2KU7; 2KWJ; 2KWK; 2KWN; 2KWO; 2KYU; 2L43; 2L5U; 2L75; 2LGG; 2LGK; 2LGL; 2LN0; 2LRI; 2LV9; 2M1R; 2M3H; 2M85; 2MA5; 2MD7; 2MD8; 2MIQ; 2MNY; 2MNZ; 2MUM; 2NAA; 2PNX; 2PUY; 2QIC; 2RI7; 2RO1; 2RSD; 2VNF; 2VP7; 2VPB; 2VPD; 2VPE; 2VPG; 2XB1; 2YQL; 2YSM; 2YT5; 2YYR; 3ASK; 3ASL; 3C6W; 3GL6; 3KQI; 3KV4; 3KV5; 3KV6; 3LQH; 3LQI; 3LQJ; 3N9L; 3N9M; 3N9N; 3N9O; 3N9P; 3N9Q; 3O33; 3O34; 3O35; 3O36; 3O37; 3O70; 3O7A; 3PUQ; 3PUR; 3QZV; 3SHB; 3SOU; 3SOW; 3SOX; 3T6R; 3U5M; 3U5N; 3U5O; 3U5P; 3V43; 3ZPV; 3ZVY; 3ZVZ; 4BBQ; 4BXZ; 4COS; 4GND; 4GNE; 4GNF; 4GNG; 4GY5; 4L58; 4L7X; 4LJN; 4LK9; 4LKA; 4LLB; 4O64; 4Q6F; 4QF2; 4QF3; 4TVR; 4UP0; 4UP5; 4YAB; 4YAD; 4YAT; 4YAX; 4YBM; 4YBS; 4YBT; 4YC9; 4ZQL; 5B73; 5B75; 5B76; 5B77; 5B78; 5B79; 5C11; 5C13; 5CEH; 5DAG; 5DAH; 5ERC; 5H1T; 5H1U; 5H1V; 5HH7; 5I3L; 5K4L; 5MR8; 5OQD; 5SZB; 5SZC; 5T8R; 5TAB; 5TBN; 5TDR; 5TDW; 5U2J; 5V9P; 5V9T; 5VDC; 5WXG; 5WXH; 5XFN; 5XFO; 5XFP; 5XFQ; 5XFR; 5XHT; 5XMY; 5Y1Z; 5Y20; 5YC3; 5YC4; 5Z8L; 5Z8N; 6ASB; 6AZE; 6FAP; 6FHQ; 6FHU; 6FI0; 6FI1; 6FKP; 6G8R; 6GUU; 6IET; 6IEU; 6IIW; 6J2P; 6LQE; 6LQF; 6LSB; 6LTH; 6LTJ; 6MLC; 6MZD; 6MZL; 6O7G; 6OIE; 6Q3M; 6RYR; 6RYU; 6U04; 6VEN; 6VFO; 6WXK; 7CRO; 7CRP; 7CRQ; 7CRR; 7CWH; 7D86; 7D87; 7D8A; 7DUF; 7EBJ; 7EBK; 7EDX; 7EG7; 7EG8; 7EG9; 7EGA; 7EGB; 7EGC; 7EGD; 7EGE; 7EGF; 7EGI; 7EGJ; 7ENA; 7ENC; 7KLO; 7KLR; 7M10; 7MJU; 7VDV; 7VVU; 7VVZ; 7ZDD; 7ZEY; 7ZEZ; 8GXQ; 8GXS » more |
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