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Entry: PS50016

General information about the entry

Entry name [info] ZF_PHD_2
Accession [info] PS50016
Entry type [info] MATRIX
Date [info] 01-APR-2002 CREATED;
10-MAY-2017 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC50016
Associated ProRule [info] PRU00146

Name and characterization of the entry

Description [info] Zinc finger PHD-type profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=54;
/DISJOINT: DEFINITION=PROTECT; N1=4; N2=51;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.4800000; R2=0.0089000; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3510.1113281; R2=3.0049100; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=789; H_SCORE=5881; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=565; H_SCORE=5208; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=-100; E1=-100; MI=-105; MD=-105; IM=-105; DM=-105;
...
                A    B    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y    Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='N';  M=  -6,  -2, -11,  -4,  -7, -14,  -8,  -8, -17,  -6, -16, -11,   1, -19,  -6,  -4,   0,  -2, -12, -25,  -8,  -7;
/M: SY='N';  M=  -4,  -7, -24, -10,  -8, -14, -15,  -8,  -7,  -2,  -9,  -4,  -4, -14,  -6,  -4,  -6,  -4,  -6, -20,  -6,  -8;
/M: SY='F';  M= -10, -19, -20, -23, -16,  17, -21, -12,   2, -16,   3,   3, -16, -23, -16, -13, -11,  -4,   2,  -9,  12, -16;
/M: SY='C';  M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/I:         I=-6; MI=-32; MD=-32; IM=-32;
/M: SY='Y';  M=  -6,  -8, -11,  -8,  -5,  -2, -13,  -4,  -9,  -8,  -6,  -3,  -7, -10,  -6,  -7,  -5,  -5,  -9, -14,   2,  -6; D=-6;
/I:         DM=-32;
/M: SY='V';  M=  -6, -20, -21, -24, -17,   6, -27, -21,  12, -13,   7,   5, -17, -21, -17, -14, -12,  -4,  13, -18,   0, -18;
/M: SY='C';  M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/M: SY='G';  M=  -5,   2, -19,  -1,  -5, -17,   6,  -8, -24,  -6, -19, -14,   6, -18,  -6,  -5,   1,  -8, -19, -26, -16,  -5;
/M: SY='E';  M=  -6,   2, -24,   4,   8, -23,  -9,  -6, -23,   5, -19, -11,   2, -12,   6,   6,   3,  -1, -18, -27, -14,   6;
/I:         MD=-15;
/M: SY='S';  M=  -1,  -2, -12,  -4,   1, -19,  -8, -11, -16,  -5, -17, -11,   0,  -5,  -3,  -8,   7,   4, -11, -29, -17,  -2; D=-2;
/I:         MD=-15;
/M: SY='D';  M=  -7,   1, -22,   3,   0, -13,  -6,  -3, -13,  -6, -10,  -9,   0, -15,  -5,  -5,  -3,  -6, -12, -18,  -3,  -4; D=-2;
/I:         MD=-15;
/M: SY='D';  M=  -6,   5, -17,   6,   6, -18,  -8,  -5, -17,   2, -15, -11,   4,  -7,   2,   0,  -1,  -6, -15, -22, -13,   4; D=-2;
/I:         MD=-15;
/M:         M=  -3,  -1, -16,   0,  -2, -10,  -1,  -8, -12,  -4, -12,  -8,  -1,  -3,  -4,  -7,  -1,  -3, -10, -10,  -8,  -3; D=-2;
/I:         I=-2; MI=0; IM=0; DM=-15;
/M: SY='D';  M=  -8,   6, -25,  12,   7, -23,  -6,  -2, -25,  -5, -21, -17,   2,  -2,  -2,  -9,   4,  -1, -20, -30, -14,   2;
/M: SY='G';  M=  -2,   7, -25,   8,   4, -26,  12,  -7, -27,  -5, -22, -17,   8, -14,  -4,  -8,   2,  -9, -21, -28, -20,   0;
/M: SY='E';  M=  -6,  -1, -23,   1,   4, -18, -16, -11, -18,  -1, -15, -12,  -3,   0,  -2,  -5,  -4,  -6, -16, -24, -14,   1;
/M: SY='L';  M= -10, -25, -14, -30, -22,  10, -27, -18,  14, -21,  18,  17, -21, -25, -17, -17, -18,  -7,   9, -14,   1, -20;
/M: SY='I';  M=  -8, -27, -21, -30, -22,   3, -30, -19,  24, -22,  21,  19, -25, -25, -18, -19, -20,  -9,  20, -15,  -1, -21;
/M: SY='Q';  M=  -7,  -9, -14, -11,  -1,  -8, -19,  -7, -11,  -8,  -8,  -5,  -7, -18,   4,  -7,  -1,  -1, -11, -20,  -1,   1;
/M: SY='C';  M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/M: SY='D';  M=  -8,  22, -24,  28,  11, -32,  -4,  -2, -30,   0, -25, -20,  13, -12,   4,  -5,   1,  -8, -25, -32, -18,   7;
/I:         I=-8; MI=0; MD=-30; IM=0; DM=-30;
/M: SY='B';  M=  -7,   0, -21,   0,  -4, -16,  -4,  -8, -18,  -3, -13,  -9,  -1, -17,  -7,  -5,  -4,  -5, -13, -23,  -8,  -6;
/M: SY='C';  M= -10, -20, 120, -30, -30, -20, -30,-120, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/I:         MD=-29;
/M: SY='D';  M=  -9,   6, -20,   9,   3, -24,  -2,  -6, -26,   1, -22, -15,   4, -10,   1,  -1,  -2,  -9, -22, -25, -14,   1; D=-6;
/I:         I=-8; MI=-29; MD=-29; IM=-29; DM=-29;
/M: SY='R';  M= -12,   2, -25,   3,   6, -21, -17,   1, -22,  11, -18, -11,   3, -15,   7,  21,  -2,  -4, -17, -25,  -9,   5; D=-6;
/I:         DM=-29;
/M: SY='W';  M=  -2, -17, -30, -18, -14, -11,  -5, -17, -18,  -9, -20, -14, -14, -11, -11, -13,  -8, -10, -17,  29,  -3, -11;
/M: SY='F';  M= -14, -25, -21, -29, -23,  30, -24,  -9,   2, -19,   3,   2, -20, -28, -21, -16, -17, -10,   2,   7,  25, -21;
/M: SY='H';  M= -20,   0, -30,   0,   0, -20, -20, 100, -30, -10, -20,   0,  10, -20,  10,   0, -10, -20, -30, -30,  20,   0;
/M: SY='Q';  M=  -6, -11, -24, -12,  -3, -17, -16, -10,  -7,  -4,  -8,  -1,  -8,  -7,   4,  -2,  -3,  -3,  -8, -24, -11,  -1;
/M:         M=  -7,  -2, -24,  -3,  -1, -11, -15,  -6, -13,   0, -13,  -8,  -1, -16,  -4,  -4,  -3,  -3, -10, -21,  -3,  -3;
/M: SY='C';  M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/M: SY='L';  M=  -3, -21, -16, -24, -16,   3, -25, -14,  10, -19,  15,   8, -20, -24, -16, -17, -13,  -3,  10, -18,   3, -17;
/M: SY='G';  M=  -5,  -3, -25,  -4,  -3, -23,   2, -10, -17,  -6, -15,  -7,   0, -11,   2,  -7,  -1,  -6, -16, -26, -16,  -1;
/M: SY='P';  M= -12, -11, -28, -10,  -7,  -6, -23,  -9,  -7,  -9,  -6,  -5, -10,   3, -11,  -9, -12,  -8,  -9, -19,  -7, -10;
/M: SY='P';  M=  -2,  -6, -25,  -6,  -1, -18, -10, -12, -17,  -5, -21, -14,  -3,   8,  -5,  -9,   3,   0, -16, -20, -14,  -4;
/M:         M=  -5,  -8, -25,  -7,  -2, -13, -14, -10, -11,  -3,  -8,  -5,  -8,  -7,  -4,  -6,  -8,  -8, -10, -21,  -7,  -4;
/M: SY='E';  M=  -8,  -4, -25,  -3,   4, -15, -20, -11, -11,   1, -10,  -8,  -3,  -7,  -3,   1,  -4,  -3,  -9, -26, -12,  -1;
/I:         I=-4; MI=0; MD=-15; IM=0;
/M: SY='S';  M=  -1,  -1, -11,   0,   1, -10,  -5,  -6,  -8,  -3,  -9,  -6,  -1,   1,  -2,  -5,   3,   1,  -7, -16,  -8,  -1; D=-1;
/I:         DM=-15;
/M:         M=  -2,  -5, -16,  -6,  -3, -10,  -7,  -9,  -6,  -4,  -5,  -4,  -4,  -6,  -2,  -5,  -4,  -4,  -7, -10,  -7,  -3; D=-1;
/I:         DM=-15;
/M: SY='A';  M=   1,  -4, -19,  -5,   0, -15, -10, -10, -10,  -3,  -7,  -5,  -5,  -8,  -3,  -5,  -3,  -4,  -8, -18, -11,  -2; D=-1;
/I:         DM=-15;
/M:         M=  -2,  -2, -22,  -2,  -2, -18, -13, -12,  -6,  -6, -11,  -7,  -2,   0,  -7, -11,  -3,  -5,  -6, -25, -15,  -6; D=-1;
/I:         DM=-15;
/M: SY='P';  M=  -6,  -9, -29,  -7,   1, -20, -12, -10, -17,  -1, -18, -11,  -7,   9,  -2,  -5,  -5,  -8, -18, -16, -13,  -2;
/M: SY='D';  M= -10,   5, -27,   9,   9, -22, -11,  -8, -23,   3, -20, -15,   3,  -1,   1,   0,   0,  -4, -21, -28, -16,   5;
/M: SY='G';  M=  -5,  -4, -24,  -3,   0, -17,   1, -10, -17,  -6, -15, -10,  -1, -16,  -5,  -5,   0,  -6, -12, -25, -14,  -3;
/M: SY='B';  M=  -6,  -2, -25,  -2,  -3, -21,  -4,  -8, -16,  -3, -15,  -8,  -2, -11,  -5,  -5,  -4,  -7, -12, -24, -14,  -4;
/M: SY='W';  M= -19, -33, -39, -35, -26,  25, -24, -20, -10, -19,  -8, -10, -30, -29, -21, -17, -31, -21, -18,  86,  32, -20;
/M: SY='L';  M=  -9, -18, -16, -21, -14,  -1, -25, -12,   2, -10,   3,   2, -14, -22,  -9,  -6,  -9,  -4,   2, -16,   3, -13;
/M: SY='C';  M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30;
/M: SY='P';  M=  -8,  -8, -29,  -7,  -1, -22, -13, -12, -16,  -1, -19, -12,  -6,  13,  -4,  -3,  -4,  -4, -15, -24, -17,  -5;
/M: SY='R';  M=  -7,  -6, -21,  -8,  -2, -12, -11,  -5, -15,   1, -10,  -7,  -2, -19,  -4,   5,  -7,  -8, -12, -22,  -7,  -4;
/M: SY='C';  M= -10, -19, 115, -29, -29, -20, -30, -26, -30, -29, -20, -19, -19, -39, -29, -29, -10, -10, -11, -49, -28, -29;
/M: SY='K';  M=  -5,   0, -22,   0,   1, -19, -15,  -9, -14,   2, -11,  -5,  -1, -15,   2,   1,  -1,   1, -10, -27, -12,   1;
/M: SY='K';  M=  -8,  -3, -14,  -6,   0, -15, -18,  -9, -15,   1, -17, -10,   1,  -6,  -3,   0,  -2,  -4, -14, -27, -12,  -2;
/M: SY='K';  M=  -5,  -7,  -4,  -9,  -1, -19, -17,  -6, -20,   2, -18,  -9,  -6, -12,  -2,   2,  -2,  -5, -13, -29, -13,  -3;
/I:         E1=0; IE=-105; DE=-105;
» more

Post-processing [info]

COMPETES_HIT_WITH PS51805

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 442 in 339 different sequences
Number of true positive hits 437 in 334 different sequences
Number of 'unknown' hits 0
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 135
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.87 %
Recall (true positives / (true positives + false negatives)) 76.40 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20_shuffled
Author [info] K_Hofmann
Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 6
Feature key [info] ZN_FING
Feature description [info] PHD-type
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
334 sequences

AF10_HUMAN  (P55197    ), AF10_MOUSE  (O54826    ), AF17_HUMAN  (P55198    ), 
AIRE_HUMAN  (O43918    ), AIRE_MOUSE  (Q9Z0E3    ), ALFIN_MEDSA (Q40359    ), 
ALFL1_ARATH (Q9FFF5    ), ALFL1_ORYSI (A2Y0Q2    ), ALFL1_ORYSJ (Q75IR6    ), 
ALFL2_ARATH (Q9SRM4    ), ALFL2_ORYSI (B8B8I3    ), ALFL2_ORYSJ (Q8H383    ), 
ALFL3_ARATH (Q9M2B4    ), ALFL3_ORYSI (B8AMA8    ), ALFL3_ORYSJ (Q84TV4    ), 
ALFL4_ARATH (O81488    ), ALFL4_ORYSI (A2XTW9    ), ALFL4_ORYSJ (Q7XUW3    ), 
ALFL5_ARATH (Q5XEM9    ), ALFL5_ORYSI (A2Y4R8    ), ALFL5_ORYSJ (Q60DW3    ), 
ALFL6_ARATH (Q8S8M9    ), ALFL6_ORYSI (A2WXR5    ), ALFL6_ORYSJ (Q7F2Z1    ), 
ALFL7_ARATH (Q8LA16    ), ALFL7_ORYSI (B8ADZ3    ), ALFL7_ORYSJ (Q6Z7F4    ), 
ALFL8_ORYSI (B8BJV8    ), ALFL8_ORYSJ (Q2R837    ), ALFL9_ORYSI (B8B8C5    ), 
ALFL9_ORYSJ (Q6YTY3    ), ATG35_KOMPG (C4QVX6    ), ATX1_ARATH  (Q9C5X4    ), 
ATX2_ARATH  (P0CB22    ), ATX3_ARATH  (Q9M364    ), ATX4_ARATH  (Q9SUE7    ), 
ATX5_ARATH  (Q8GZ42    ), ATXR5_ARATH (Q8VZJ1    ), ATXR5_RICCO (B9RU15    ), 
ATXR6_ARATH (Q9FNE9    ), BAZ1A_HUMAN (Q9NRL2    ), BAZ1A_MOUSE (O88379    ), 
BAZ1A_XENLA (Q8UVR5    ), BAZ1B_DANRE (A2BIL7    ), BAZ1B_HUMAN (Q9UIG0    ), 
BAZ1B_MOUSE (Q9Z277    ), BAZ1B_XENLA (A8DZJ1    ), BAZ2A_HUMAN (Q9UIF9    ), 
BAZ2A_MOUSE (Q91YE5    ), BAZ2A_XENLA (B7ZS37    ), BAZ2B_CHICK (Q9DE13    ), 
BAZ2B_HUMAN (Q9UIF8    ), BAZ2B_MOUSE (A2AUY4    ), BAZ2_CAEEL  (Q23590    ), 
BPTF_HUMAN  (Q12830    ), BRD1_HUMAN  (O95696    ), BRD1_MOUSE  (G5E8P1    ), 
BRDH_DROME  (Q7JVP4    ), BRPF1_HUMAN (P55201    ), BRPF1_MOUSE (B2RRD7    ), 
BRPF3_HUMAN (Q9ULD4    ), BRPF3_MOUSE (B2KF05    ), BYE1_CANGB  (Q6FJ00    ), 
BYE1_DEBHA  (Q6BNY5    ), BYE1_PICGU  (A5DDB7    ), BYE1_SCHPO  (Q9Y7V2    ), 
BYE1_YEAS7  (A6ZZW1    ), BYE1_YEAST  (P36106    ), C3H19_ARATH (Q9SIV5    ), 
C3H44_ARATH (Q9SD34    ), CHD3_CAEEL  (Q22516    ), CHD3_DROME  (O16102    ), 
CHD3_HUMAN  (Q12873    ), CHD4_HUMAN  (Q14839    ), CHD4_MOUSE  (Q6PDQ2    ), 
CHD5_HUMAN  (Q8TDI0    ), CHD5_MOUSE  (A2A8L1    ), CHD5_RAT    (D3ZD32    ), 
CHDM_DROME  (O97159    ), CHR4_ARATH  (F4KBP5    ), CTI6_YEAST  (Q08923    ), 
CXXC1_BOVIN (Q5EA28    ), CXXC1_DROME (Q9W352    ), CXXC1_HUMAN (Q9P0U4    ), 
CXXC1_MOUSE (Q9CWW7    ), DIDO1_HUMAN (Q9BTC0    ), DIDO1_MOUSE (Q8C9B9    ), 
DPF1_CHICK  (P58267    ), DPF1_HUMAN  (Q92782    ), DPF1_MOUSE  (Q9QX66    ), 
DPF1_RAT    (P56163    ), DPF3_CHICK  (P58270    ), DPF3_DANRE  (A9LMC0    ), 
DPF3_HUMAN  (Q92784    ), DPF3_MOUSE  (P58269    ), DPFF1_CAEEL (Q09477    ), 
EBS_ARATH   (F4JL28    ), ECM5_YEAST  (Q03214    ), EHD3_ORYSJ  (Q6ZJM9    ), 
FGT1_ARATH  (F4IF36    ), FXL19_HUMAN (Q6PCT2    ), FXL19_MOUSE (Q6PB97    ), 
HAT31_ARATH (Q04996    ), HAZ1_ORYSJ  (Q8H991    ), HOX1A_MAIZE (P46605    ), 
IDM1_ARATH  (F4IXE7    ), ING1_ARATH  (Q9LIQ6    ), ING1_DICDI  (Q54PN9    ), 
ING1_HUMAN  (Q9UK53    ), ING1_MOUSE  (Q9QXV3    ), ING1_SCHPO  (O42871    ), 
ING2_ARATH  (B3H615    ), ING2_HUMAN  (Q9H160    ), ING2_MOUSE  (Q9ESK4    ), 
ING2_SCHPO  (O74736    ), ING3_CHICK  (Q5ZK36    ), ING3_HUMAN  (Q9NXR8    ), 
ING3_MOUSE  (Q8VEK6    ), ING3_PONAB  (Q5RBA1    ), ING3_RAT    (Q498T3    ), 
ING3_XENLA  (Q7ZX31    ), ING3_XENTR  (Q66KD5    ), ING4_BOVIN  (Q3T095    ), 
ING4_CHICK  (Q5ZKY4    ), ING4_HUMAN  (Q9UNL4    ), ING4_MOUSE  (Q8C0D7    ), 
ING5_DROME  (Q9VJY8    ), ING5_HUMAN  (Q8WYH8    ), ING5_MOUSE  (Q9D8Y8    ), 
INT12_BOVIN (Q32LL5    ), INT12_DANRE (Q6IQU7    ), INT12_DROME (Q9VBB3    ), 
INT12_HUMAN (Q96CB8    ), INT12_MACFA (Q8WNV2    ), INT12_MOUSE (Q9D168    ), 
INT12_PONAB (Q5RCV7    ), INT12_RAT   (Q68FR3    ), INT12_XENLA (Q6DJM6    ), 
INT12_XENTR (Q0V9U1    ), JADE1_BOVIN (Q5E9T7    ), JADE1_DANRE (Q803A0    ), 
JADE1_HUMAN (Q6IE81    ), JADE1_MOUSE (Q6ZPI0    ), JADE1_XENLA (Q6GQJ2    ), 
JADE2_HUMAN (Q9NQC1    ), JADE2_MOUSE (Q6ZQF7    ), JADE3_DANRE (Q7ZVP1    ), 
JADE3_HUMAN (Q92613    ), JADE3_MOUSE (Q6IE82    ), JADE3_XENTR (Q0P4S5    ), 
JHD1_ASPFU  (Q4WHB7    ), JHD1_CANAL  (Q5A847    ), JHD1_DEBHA  (Q6BXJ4    ), 
JHD1_EMENI  (Q5AW75    ), JHD1_YARLI  (Q6C423    ), JHD2_YEAST  (P47156    ), 
KAT6A_HUMAN (Q92794    ), KAT6A_MOUSE (Q8BZ21    ), KAT6A_RAT   (Q5TKR9    ), 
KAT6B_HUMAN (Q8WYB5    ), KAT6B_MACFA (Q8WML3    ), KAT6B_MOUSE (Q8BRB7    ), 
KD5BB_DANRE (Q6IQX0    ), KDM2A_HUMAN (Q9Y2K7    ), KDM2A_MOUSE (P59997    ), 
KDM2A_XENTR (Q5U263    ), KDM2B_HUMAN (Q8NHM5    ), KDM2B_MOUSE (Q6P1G2    ), 
KDM2B_XENLA (Q640I9    ), KDM5A_HUMAN (P29375    ), KDM5A_MOUSE (Q3UXZ9    ), 
KDM5B_CHICK (Q5F3R2    ), KDM5B_HUMAN (Q9UGL1    ), KDM5B_MOUSE (Q80Y84    ), 
KDM5C_CANLF (Q38JA7    ), KDM5C_HUMAN (P41229    ), KDM5C_MOUSE (P41230    ), 
KDM5C_PIG   (A1YVX4    ), KDM5D_CANLF (Q30DN6    ), KDM5D_HUMAN (Q9BY66    ), 
KDM5D_MOUSE (Q62240    ), KDM5D_PANTR (Q5XUN4    ), KDM5_CAEBR  (Q61T02    ), 
KDM5_CAEEL  (Q23541    ), KDM5_DROME  (Q9VMJ7    ), KDM7A_DANRE (Q5RHD1    ), 
KDM7A_HUMAN (Q6ZMT4    ), KDM7A_MOUSE (Q3UWM4    ), KDM7A_XENTR (Q08D35    ), 
KDM7B_DANRE (P0CF52    ), KMT2A_HUMAN (Q03164    ), KMT2A_MOUSE (P55200    ), 
KMT2B_HUMAN (Q9UMN6    ), KMT2B_MOUSE (O08550    ), KMT2C_HUMAN (Q8NEZ4    ), 
KMT2C_MOUSE (Q8BRH4    ), KMT2D_HUMAN (O14686    ), KMT2D_MOUSE (Q6PDK2    ), 
KMT2E_HUMAN (Q8IZD2    ), KMT2E_MOUSE (Q3UG20    ), LE418_CAEEL (G5EBZ4    ), 
LID2_SCHPO  (Q9HDV4    ), LIN49_CAEEL (Q20318    ), LIN59_CAEEL (O44757    ), 
MBD9_ARATH  (Q9SGH2    ), MIT1_SCHPO  (Q9P793    ), MLO2_SCHPO  (Q09329    ), 
MSC1_SCHPO  (Q9UT79    ), MTF2_HUMAN  (Q9Y483    ), MTF2_MOUSE  (Q02395    ), 
MTF2_PONAB  (Q5R7T9    ), NFXL1_ARATH (Q9SY59    ), NSD1_HUMAN  (Q96L73    ), 
NSD1_MOUSE  (O88491    ), NSD2_HUMAN  (O96028    ), NSD2_MOUSE  (Q8BVE8    ), 
NSD3_HUMAN  (Q9BZ95    ), NSD3_MOUSE  (Q6P2L6    ), NSD_DROME   (Q8MT36    ), 
NTO1_SCHPO  (O74759    ), NTO1_YEAST  (Q12311    ), NU301_CAEEL (Q6BER5    ), 
NU301_DROME (Q9W0T1    ), ORC1A_ARATH (Q710E8    ), ORC1B_ARATH (Q9SU24    ), 
ORC1_ORYSJ  (Q5SMU7    ), ORTH2_ARATH (Q8VYZ0    ), PCL_DROME   (Q24459    ), 
PF21A_HUMAN (Q96BD5    ), PF21A_MOUSE (Q6ZPK0    ), PF21B_HUMAN (Q96EK2    ), 
PF21B_MOUSE (Q8C966    ), PHF10_BOVIN (Q2T9V9    ), PHF10_DANRE (Q6NWE1    ), 
PHF10_HUMAN (Q8WUB8    ), PHF10_MOUSE (Q9D8M7    ), PHF10_RAT   (Q4V7A6    ), 
PHF10_XENLA (Q63ZP1    ), PHF12_HUMAN (Q96QT6    ), PHF12_MOUSE (Q5SPL2    ), 
PHF14_DANRE (A0A286Y9D1), PHF14_HUMAN (O94880    ), PHF14_MOUSE (Q9D4H9    ), 
PHF19_MOUSE (Q9CXG9    ), PHF1_HUMAN  (O43189    ), PHF1_MOUSE  (Q9Z1B8    ), 
PHF1_SCHPO  (P87233    ), PHF2_DANRE  (Q6P949    ), PHF2_DICLA  (E6ZGB4    ), 
PHF2_HUMAN  (O75151    ), PHF2_MOUSE  (Q9WTU0    ), PHF2_SCHPO  (Q09908    ), 
PHF3_HUMAN  (Q92576    ), PHF8_DANRE  (P0CH95    ), PHF8_HUMAN  (Q9UPP1    ), 
PHF8_MOUSE  (Q80TJ7    ), PHO23_YEAST (P50947    ), PHRF1_HUMAN (Q9P1Y6    ), 
PHRF1_MOUSE (A6H619    ), PHRF1_RAT   (Q63625    ), PKL_ARATH   (Q9S775    ), 
PRH_ARATH   (P48785    ), PRH_PETCR   (P48786    ), PTM_ARATH   (F4JYC8    ), 
PYGO1_HUMAN (Q9Y3Y4    ), PYGO1_MOUSE (Q9D0P5    ), PYGO2_HUMAN (Q9BRQ0    ), 
PYGO_DROME  (Q9V9W8    ), RCO1_YEAST  (Q04779    ), REQUA_XENLA (Q9W638    ), 
REQUB_XENLA (Q9W636    ), REQU_CHICK  (P58268    ), REQU_HUMAN  (Q92785    ), 
REQU_MOUSE  (Q61103    ), RNO_DROME   (Q7YZH1    ), RNO_DROPS   (Q29EQ3    ), 
RSF1_HUMAN  (Q96T23    ), SAYP_DROME  (Q9VWF2    ), SCC2_ARATH  (A5HEI1    ), 
SET1_PLAF7  (C6KTD2    ), SET3_YEAST  (P36124    ), SET4_YEAST  (P42948    ), 
SHL_ARATH   (Q9FEN9    ), SNT2_YEAST  (P53127    ), SP110_HUMAN (Q9HB58    ), 
SP140_HUMAN (Q13342    ), SP14L_HUMAN (Q9H930    ), SPP1_SCHPO  (O74508    ), 
SPP1_YEAST  (Q03012    ), TAF3_CHICK  (Q5F489    ), TAF3_HUMAN  (Q5VWG9    ), 
TAF3_MOUSE  (Q5HZG4    ), TAF3_XENLA  (Q5EAW9    ), TIF1A_HUMAN (O15164    ), 
TIF1A_MOUSE (Q64127    ), TIF1B_HUMAN (Q13263    ), TIF1B_MOUSE (Q62318    ), 
TIF1B_RAT   (O08629    ), TRI33_DANRE (Q6E2N3    ), TRI33_HUMAN (Q9UPN9    ), 
TRI33_MOUSE (Q99PP7    ), TRI33_XENLA (Q56R14    ), TRI66_HUMAN (O15016    ), 
TRI66_MOUSE (Q924W6    ), TRX1_ORYSJ  (Q6K431    ), TRX_DROME   (P20659    ), 
TRX_DROVI   (Q24742    ), UBR7_DICDI  (Q54DV0    ), UHRF1_BOVIN (A7E320    ), 
UHRF1_DANRE (E7EZF3    ), UHRF1_HUMAN (Q96T88    ), UHRF1_MOUSE (Q8VDF2    ), 
UHRF1_RAT   (Q7TPK1    ), UHRF1_XENLA (B6CHA3    ), UHRF1_XENTR (F6UA42    ), 
UHRF2_HUMAN (Q96PU4    ), UHRF2_MOUSE (Q7TMI3    ), Y3228_ARATH (Q5PNS0    ), 
Y8158_DICDI (Q55FD6    ), YA27_SCHPO  (Q09698    ), YAC5_SCHPO  (Q09819    ), 
YNG2_ASHGO  (Q757W2    ), YNG2_CANAL  (Q5AHB8    ), YNG2_CANGB  (Q6FSB1    ), 
YNG2_DEBHA  (Q6BNL6    ), YNG2_KLULC  (Q6CXN0    ), YNG2_YARLI  (Q6C5V7    ), 
YNG2_YEAST  (P38806    ), YQF7_SCHPO  (O94400    ), ZFP1_CAEEL  (P34447    ), 
ZMY11_HUMAN (Q15326    ), ZMY11_MOUSE (Q8R5C8    ), ZMYD8_DROME (Q7KRS9    ), 
ZMYD8_HUMAN (Q9ULU4    )
» more

UniProtKB/Swiss-Prot
False negative sequences
135 sequences

ARID4_ARATH (Q6NQ79    ), ASH1L_HUMAN (Q9NR48    ), ASH1L_MOUSE (Q99MY8    ), 
ASH1_DROME  (Q9VW15    ), ASH2L_HUMAN (Q9UBL3    ), ASH2L_MOUSE (Q91X20    ), 
ASH2_CAEEL  (G5EFZ3    ), ASH2_DROME  (Q94545    ), ASH2_SCHPO  (O60070    ), 
ASHR3_ARATH (Q949T8    ), ASXL1_HUMAN (Q8IXJ9    ), ASXL1_MOUSE (P59598    ), 
ASXL2_CHICK (Q5ZM88    ), ASXL2_HUMAN (Q76L83    ), ASXL2_MOUSE (Q8BZ32    ), 
ASXL3_HUMAN (Q9C0F0    ), ASXL3_MOUSE (Q8C4A5    ), ASX_DROME   (Q9V727    ), 
BYE1_YARLI  (Q6C0K9    ), CBFA_DICDI  (O97101    ), CTI6_SCHPO  (Q1MTR4    ), 
EBSL_ARATH  (F4JGB7    ), EDM2_ARATH  (F4K3G5    ), G2E3_CHICK  (Q5F4A1    ), 
G2E3_HUMAN  (Q7L622    ), G2E3_MACFA  (Q4R9C4    ), G2E3_MOUSE  (Q5RJY2    ), 
HAC12_ARATH (Q9FWQ5    ), HAC1_ARATH  (Q9C5X9    ), HAC2_ARATH  (Q9FYH1    ), 
HAC4_ARATH  (Q9LG11    ), HAC5_ARATH  (Q9LE42    ), HACL1_ORYSJ (Q6YXY2    ), 
HACL2_ORYSJ (Q5Z8V7    ), HACL3_ORYSJ (Q9XHY7    ), HOP1_SCHPO  (Q9P7P2    ), 
JHD1_ASHGO  (Q75AL5    ), JHD1_CRYNB  (P0CO41    ), JHD1_CRYNJ  (P0CO40    ), 
JHD1_KLULC  (Q6CIC9    ), JHD1_USTMA  (Q4P5U1    ), JHD1_YEAST  (P40034    ), 
JMJ17_ARATH (F4I240    ), JMJ24_ARATH (F4HZD1    ), KDM4A_HUMAN (O75164    ), 
KDM4A_MOUSE (Q8BW72    ), KDM4A_PONAB (Q5RD88    ), KDM4B_HUMAN (O94953    ), 
KDM4B_MOUSE (Q91VY5    ), KDM4C_HUMAN (Q9H3R0    ), KDM4C_MOUSE (Q8VCD7    ), 
KDM7_CAEEL  (Q9GYI0    ), LSY13_CAEEL (A3QMD7    ), MES4_CAEEL  (Q9NH52    ), 
MMD1_ARATH  (Q7X6Y7    ), MS1_ARATH   (Q9FMS5    ), OBE1_ARATH  (Q9S736    ), 
OBE2_ARATH  (Q9LUB7    ), OBE3_ARATH  (Q94B71    ), OBE4_ARATH  (Q84TI3    ), 
ORTH1_ARATH (Q9FKA7    ), ORTH3_ARATH (Q9FVS2    ), ORTH4_ARATH (Q9C8E1    ), 
ORTH5_ARATH (Q680I0    ), P20L1_HUMAN (A8MW92    ), P20L1_MOUSE (Q8CCJ9    ), 
P20L1_RAT   (Q4V9H5    ), PF23A_DANRE (Q5BJ10    ), PF23A_XENLA (Q5HZN9    ), 
PF23B_DANRE (Q7SXB5    ), PF23B_XENLA (Q0IHB0    ), PH11A_MOUSE (Q8BVM9    ), 
PH11L_RAT   (Q5I0J8    ), PHF11_BOVIN (Q2HJ93    ), PHF11_HUMAN (Q9UIL8    ), 
PHF11_MOUSE (A6H5X4    ), PHF11_RAT   (Q5I0E2    ), PHF13_HUMAN (Q86YI8    ), 
PHF13_MOUSE (Q8K2W6    ), PHF19_HUMAN (Q5T6S3    ), PHF20_HUMAN (Q9BVI0    ), 
PHF20_MOUSE (Q8BLG0    ), PHF23_BOVIN (A5D962    ), PHF23_HUMAN (Q9BUL5    ), 
PHF23_MOUSE (Q8BSN5    ), PHF23_RAT   (Q6AY75    ), PHF23_XENTR (Q5U5E5    ), 
PHF24_HUMAN (Q9UPV7    ), PHF24_MOUSE (Q80TL4    ), PHF24_PONAB (Q5R4R7    ), 
PHF6_BOVIN  (Q08DR0    ), PHF6_HUMAN  (Q8IWS0    ), PHF6_MOUSE  (Q9D4J7    ), 
PHF6_PONAB  (Q5R5Z2    ), PHF7_HUMAN  (Q9BWX1    ), PHF7_MOUSE  (Q9DAG9    ), 
PHF7_RAT    (Q6AXW4    ), PTC1_ORYSJ  (Q67V61    ), PVIP_NICBE  (Q84N38    ), 
PVIP_PEA    (Q84N37    ), RAG2_CHICK  (P25022    ), RAG2_DANRE  (O13034    ), 
RAG2_HUMAN  (P55895    ), RAG2_MOUSE  (P21784    ), RAG2_ONCMY  (Q91193    ), 
RAG2_RABIT  (P34089    ), RAG2_XENLA  (Q91830    ), RAI1_HUMAN  (Q7Z5J4    ), 
RAI1_MOUSE  (Q61818    ), SET26_CAEEL (Q9U263    ), SET3_SCHPO  (Q10362    ), 
SET9_CAEEL  (O44498    ), SETVS_PLAF7 (Q8IE95    ), SHPRH_HUMAN (Q149N8    ), 
SHPRH_MOUSE (Q7TPQ3    ), SIZ1_ARATH  (Q680Q4    ), SIZ1_ORYSJ  (Q6L4L4    ), 
SIZ2_ORYSJ  (Q6ASW7    ), SNT2_SCHPO  (Q10077    ), TCF19_HUMAN (Q9Y242    ), 
TCF19_MACMU (Q5TM48    ), TCF19_PANTR (Q7YR48    ), TCF19_PIG   (Q9TSV4    ), 
TCF20_HUMAN (Q9UGU0    ), TCF20_MOUSE (Q9EPQ8    ), TTA1_ORYSJ  (Q10PC5    ), 
UBR7_HUMAN  (Q8N806    ), UBR7_MOUSE  (Q8BU04    ), VIL1_ARATH  (Q9LHF5    ), 
VIL2_ARATH  (Q9SUM4    ), VIL3_ARATH  (Q5BPT4    ), VIN3_ARATH  (Q9FIE3    ), 
Y1342_ARATH (Q9C810    ), Y2181_ARATH (Q9ZUA9    ), YNG1_YEAST  (Q08465    )
» more

UniProtKB/Swiss-Prot
False positive sequences
5 sequences

FAP1H_SCHPO (O74853    ), NFX1_BOVIN  (A6QLA0    ), NFX1_DICDI  (Q54BK0    ), 
NFX1_HUMAN  (Q12986    ), NFX1_MOUSE  (B1AY10    )
» more

PDB
[Detailed view]
262 PDB

1F62; 1FP0; 1MM2; 1MM3; 1WE9; 1WEE; 1WEM; 1WEN; 1WEP; 1WES; 1WEU; 1WEV; 1WEW; 1WIL; 1X4I; 1XWH; 2DX8; 2E6R; 2E6S; 2F6J; 2F6N; 2FSA; 2FUI; 2FUU; 2G6Q; 2JMI; 2JMJ; 2K16; 2K17; 2K1J; 2KE1; 2KFT; 2KGG; 2KGI; 2KU3; 2KU7; 2KWJ; 2KWK; 2KWN; 2KWO; 2KYU; 2L43; 2L5U; 2L75; 2LGG; 2LGK; 2LGL; 2LN0; 2LRI; 2LV9; 2M1R; 2M3H; 2M85; 2MA5; 2MD7; 2MD8; 2MIQ; 2MNY; 2MNZ; 2MUM; 2NAA; 2PNX; 2PUY; 2QIC; 2RI7; 2RO1; 2RSD; 2VNF; 2VP7; 2VPB; 2VPD; 2VPE; 2VPG; 2XB1; 2YQL; 2YSM; 2YT5; 2YYR; 3ASK; 3ASL; 3C6W; 3GL6; 3KQI; 3KV4; 3KV5; 3KV6; 3LQH; 3LQI; 3LQJ; 3N9L; 3N9M; 3N9N; 3N9O; 3N9P; 3N9Q; 3O33; 3O34; 3O35; 3O36; 3O37; 3O70; 3O7A; 3PUQ; 3PUR; 3QZV; 3SHB; 3SOU; 3SOW; 3SOX; 3T6R; 3U5M; 3U5N; 3U5O; 3U5P; 3V43; 3ZPV; 3ZVY; 3ZVZ; 4BBQ; 4BXZ; 4COS; 4GND; 4GNE; 4GNF; 4GNG; 4GY5; 4L58; 4L7X; 4LJN; 4LK9; 4LKA; 4LLB; 4O64; 4Q6F; 4QF2; 4QF3; 4TVR; 4UP0; 4UP5; 4YAB; 4YAD; 4YAT; 4YAX; 4YBM; 4YBS; 4YBT; 4YC9; 4ZQL; 5B73; 5B75; 5B76; 5B77; 5B78; 5B79; 5C11; 5C13; 5CEH; 5DAG; 5DAH; 5ERC; 5H1T; 5H1U; 5H1V; 5HH7; 5I3L; 5K4L; 5MR8; 5OQD; 5SZB; 5SZC; 5T8R; 5TAB; 5TBN; 5TDR; 5TDW; 5U2J; 5V9P; 5V9T; 5VDC; 5WXG; 5WXH; 5XFN; 5XFO; 5XFP; 5XFQ; 5XFR; 5XHT; 5XMY; 5Y1Z; 5Y20; 5YC3; 5YC4; 5Z8L; 5Z8N; 6ASB; 6AZE; 6FAP; 6FHQ; 6FHU; 6FI0; 6FI1; 6FKP; 6G8R; 6GUU; 6IET; 6IEU; 6IIW; 6J2P; 6LQE; 6LQF; 6LSB; 6LTH; 6LTJ; 6MLC; 6MZD; 6MZL; 6O7G; 6OIE; 6Q3M; 6RYR; 6RYU; 6U04; 6VEN; 6VFO; 6WXK; 7CRO; 7CRP; 7CRQ; 7CRR; 7CWH; 7D86; 7D87; 7D8A; 7DUF; 7EBJ; 7EBK; 7EDX; 7EG7; 7EG8; 7EG9; 7EGA; 7EGB; 7EGC; 7EGD; 7EGE; 7EGF; 7EGI; 7EGJ; 7ENA; 7ENC; 7KLO; 7KLR; 7M10; 7MJU; 7VDV; 7VVU; 7VVZ; 7ZDD; 7ZEY; 7ZEZ; 8GXQ; 8GXS
» more

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