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| Entry: PS50118 |
General information about the entry
| Entry name [info] | HMG_BOX_2 |
| Accession [info] | PS50118 |
| Entry type [info] | MATRIX |
| Date [info] |
01-JAN-2003 CREATED;
10-MAY-2017 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00305 |
| Associated ProRule [info] | PRU00267 |
Name and characterization of the entry
| Description [info] | HMG boxes A and B DNA-binding domains profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=69; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=64; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.4607000; R2=0.0153885; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=4076.7500000; R2=4.7500000; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=458; H_SCORE=6252; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=328; H_SCORE=5635; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: D=-20; I=-20; B1=-70; E1=-70; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='P'; M= -5,-17,-29,-14, -6,-22,-20,-20, -8, -9,-18,-11,-14, 39,-11,-15, -6, -4,-12,-28,-21,-12; /M: SY='K'; M=-10, -2,-31, 0, 12,-29,-20,-10,-29, 39,-29,-12, -2, 0, 9, 24, -8, -9,-22,-22,-13, 9; /M: SY='R'; M=-14,-10,-28,-11, -1,-20,-20, -5,-22, 24,-18, -5, -3,-12, 6, 44, -9, -7,-15,-21,-11, -1; /M: SY='P'; M= -2,-14,-33, -9, -1,-27,-15,-18,-19, -9,-27,-19,-13, 62, -8,-17, -2, -5,-24,-30,-27, -8; /M: SY='M'; M= -5,-17,-24,-19,-10,-11,-21,-13, 0, -5, 1, 11,-15, 0, -6, -5,-10, -5, -2,-24,-10, -9; /M: SY='N'; M= -1, 10,-16, 3, -4,-15, -2, -3,-18, -7,-25,-17, 21,-15, -3, -6, 20, 13,-16,-31,-10, -4; /M: SY='A'; M= 30,-10,-14,-15, -9,-23, 5,-18,-16,-11,-17,-13, -8, -2, -8,-18, 9, -2, -8,-24,-22, -9; /M: SY='F'; M=-19,-23,-25,-28,-21, 49,-29, -3, -2,-19, 3, 0,-19,-28,-22,-14,-18,-10, -6, 16, 45,-21; /M: SY='F'; M=-12,-21,-22,-28,-18, 20,-26,-12, 12,-19, 12, 20,-16,-22,-13,-15,-16, -9, 5,-13, 6,-15; /M: SY='I'; M= -8,-26,-20,-28,-21, 5,-29,-21, 18,-17, 18, 11,-23,-26,-18,-12,-18, -7, 18,-19, -2,-20; /M: SY='W'; M=-19,-28,-31,-32,-24, 39,-26,-12, -7,-19, -3, -6,-24,-28,-21,-15,-24,-16,-13, 52, 37,-20; /M: SY='S'; M= 2,-10, 0,-14,-10,-11,-15,-12,-12, -9,-11, -6, -6,-19, -7, -7, 7, 4, -5,-28,-10, -9; /M: SY='Q'; M= -3, 0,-15, -3, 6,-26,-14, -4,-21, 8,-20, -9, 3,-14, 14, 8, 3, -3,-18,-27,-15, 9; /M: SY='E'; M= -9, 10,-28, 16, 22,-25,-13, 2,-26, 2,-20,-15, 3, -9, 6, -1, -1, -8,-23,-24,-12, 13; /M: SY='E'; M= -8, -4,-25, -4, 10,-14,-20, 3,-12, 0, -9, -3, -2,-15, 7, -1, -5, -7,-13,-23, -6, 8; /M: SY='R'; M=-17,-10,-28,-11, 1,-14,-22, 2,-21, 16,-12, -5, -4,-19, 6, 41,-11,-10,-16,-20, -6, 0; /M: SY='R'; M= -4, -3,-27, -2, 6,-25,-12, 2,-24, 8,-22,-12, -1, -1, 6, 11, -1, -7,-20,-26,-14, 4; /M: SY='K'; M= -8, 3,-26, 2, 11,-26,-17, -5,-21, 19,-22,-10, 4,-12, 10, 12, -3, -5,-17,-25,-12, 10; /I: I=-5; MI=0; MD=-15; IM=0; /M: SY='I'; M= -8,-21,-22,-25,-17, 5,-27,-14, 16,-13, 12, 11,-18,-21,-14,-12,-17, -8, 11,-13, 8,-17; D=-3; /I: DM=-15; /M: SY='K'; M= 1, -9,-21,-12, -4,-14,-18,-10,-10, 9, -6, 0, -8,-15, -2, 4, -9, -7, -6,-20, -8, -3; D=-3; /I: DM=-15; /M: SY='E'; M= 1, 0,-23, -1, 6,-22,-11, -1,-18, 5,-15, -8, 0,-12, 6, 1, -1, -6,-15,-24,-11, 5; D=-3; /I: MD=-15; /M: SY='E'; M= -9, 3,-28, 8, 22,-27,-17, -1,-22, 5,-18,-12, -2, 0, 14, 1, -3, -8,-22,-25,-14, 17; D=-3; /I: MD=-15; /M: SY='N'; M=-12, 10,-18, 2, -5, -8,-13, 14,-16, -8,-16,-10, 19,-20, -4, -5, -1, -4,-18,-24, -2, -5; D=-3; /I: MD=-15; /M: SY='P'; M= -6,-16,-34, -9, 1,-28,-18,-18,-19, -6,-27,-18,-15, 66, -8,-15, -5, -6,-25,-29,-26, -7; D=-3; /I: I=-5; MI=0; MD=-15; IM=0; DM=-15; /M: SY='D'; M= -8, 13,-25, 16, 6,-27, 1, -4,-27, -1,-23,-17, 9,-10, 1, -6, 3, -5,-23,-30,-18, 3; D=-3; /I: DM=-15; /M: SY='M'; M= -4,-16,-21,-20,-14, -5,-21,-14, 8, -9, 10, 15,-16,-19,-10,-11,-13, -5, 6,-19, -4,-12; D=-3; /I: DM=-15; /M: SY='H'; M= -5, 3,-23, 1, 5,-23, -9, 13,-24, 4,-24,-12, 8,-12, 6, 4, 7, 0,-20,-30,-10, 4; /M: SY='N'; M= -7, -1,-19,-11,-12, 0,-17, -9, -1,-11, -7, -4, 8,-20,-12, -8, -2, -1, -2,-25, -7,-12; /M: SY='A'; M= 9, -6,-18,-10, -6,-19, -1,-13,-14, -4,-15, -7, -1,-12, -5, -7, 9, 5, -9,-26,-16, -6; /I: I=-6; MI=-32; MD=-32; IM=-32; /M: SY='E'; M= -4, 14,-25, 21, 28,-28,-14, -4,-24, 2,-19,-18, 4, -7, 8, -6, 2, -6,-20,-31,-18, 18; D=-6; /I: I=-6; MI=-32; IM=-32; DM=-32; /M: SY='I'; M= -8,-27,-22,-32,-22, 6,-33,-25, 29,-25, 20, 14,-22,-23,-21,-23,-17, -6, 23,-21, -1,-23; /M: SY='S'; M= 8, -5,-12, -8, -7,-18, -3,-14,-14, -8,-19,-11, 2,-13, -5,-10, 19, 11, -6,-32,-17, -6; /I: MD=-25; /M: SY='K'; M= -8, -2,-26, -1, 5,-25,-15, -9,-24, 30,-24, -9, -1,-12, 8, 21, -5, -7,-16,-21,-11, 6; D=-5; /I: I=-5; MI=-25; MD=-25; IM=-25; DM=-25; /M: SY='R'; M= -5, -9,-23,-12, -4,-15,-20,-10, -3, 4, -6, 2, -6,-14, 1, 5, -7, -6, -3,-20, -8, -3; D=-5; /I: I=-5; MI=-25; MD=-25; IM=-25; DM=-25; /M: SY='L'; M= -4,-24, -4,-27,-21, 0,-22,-21, 12,-24, 22, 10,-22,-25,-18,-20,-18, -8, 9,-20, -6,-20; D=-5; /I: I=-5; MI=-25; MD=-25; IM=-25; DM=-25; /M: SY='G'; M= 7, -7,-22, -8,-11,-25, 42,-16,-30,-14,-25,-17, 0,-15,-13,-16, 7, -9,-21,-22,-24,-12; D=-5; /I: DM=-25; /M: SY='E'; M= -2, 2,-23, 4, 15,-23,-12, -5,-23, 8,-19,-13, -1,-11, 6, 3, 0, -6,-17,-25,-12, 10; /M: SY='R'; M= -9, -7,-26, -8, 4,-19,-19, -6,-15, 12,-10, 0, -5,-15, 7, 20, -8, -7,-12,-22,-10, 4; /M: SY='W'; M=-19,-38,-45,-39,-29, 10,-19,-28,-20,-20,-19,-19,-38,-30,-20,-20,-38,-28,-28,137, 29,-20; /M: SY='K'; M=-10, 2,-27, 0, 6,-26,-15, -1,-26, 29,-26,-10, 7,-14, 10, 25, -4, -7,-20,-24,-11, 7; /M: SY='N'; M= -2, 3,-21, 1, 4,-19, -9, -7,-16, -2,-12, -9, 5,-14, 0, -2, 2, 0,-15,-28,-14, 2; /M: SY='L'; M= -9,-24,-18,-26,-14, 3,-27,-14, 15,-21, 32, 22,-24,-25,-12,-16,-23, -9, 7,-21, -2,-13; /M: SY='S'; M= 0, 1,-19, 0, 3,-22, -9, -8,-20, -3,-23,-15, 4, -2, 1, -6, 16, 11,-14,-32,-17, 1; /I: MD=-22; /M: SY='E'; M= -4, 8,-27, 13, 17,-28,-14, -6,-23, 3,-20,-16, 1, 6, 6, -4, -1, -7,-22,-28,-18, 11; D=-4; /I: MD=-22; /M: SY='E'; M= 2, 4,-22, 4, 12,-25,-11, -6,-23, 11,-21,-13, 3, -9, 7, 3, 5, -1,-17,-26,-15, 9; D=-4; /I: I=-6; MI=0; IM=0; DM=-22; /M: SY='E'; M= -9, 8,-28, 15, 31,-28,-19, -5,-22, 8,-18,-14, -1, -7, 11, -1, -3, -9,-19,-29,-16, 21; /M: SY='K'; M=-11, -1,-30, -2, 8,-28,-20, -9,-29, 45,-28,-10, 0,-11, 10, 33,-10, -9,-19,-20,-10, 9; /M: SY='R'; M= -2, -5,-25, -5, 3,-21,-13, -7,-16, 6,-14, -6, -4,-14, 6, 7, -3, -7,-13,-21,-11, 3; /M: SY='P'; M= -9,-11,-31, -8, 3,-23,-21, -7,-18, 9,-20, -8,-11, 24, -1, 1,-10, -9,-18,-24,-13, -2; /M: SY='Y'; M=-20,-26,-29,-29,-24, 42,-28, 0, -2,-18, 1, -2,-23,-30,-21,-15,-23,-13, -9, 38, 54,-23; /M: SY='E'; M=-11, -7,-27, -7, 5, -8,-24, -6, -4, -3, -7, -4, -7,-15, -2, -6, -8, -8, -6,-20, -1, 0; /M: SY='E'; M= -7, 9,-27, 13, 19,-28,-16, 1,-25, 11,-21,-14, 3, -9, 13, 5, -1, -8,-22,-27,-13, 15; /M: SY='E'; M= -6, -5,-25, -4, 12,-18,-19, -7,-14, 9, -5, 1, -8,-13, 4, 4,-10, -9,-12,-24,-11, 8; /M: SY='A'; M= 31,-11,-11,-19,-10,-12, -7,-15, -9,-10, -9, -8,-10,-14, -8,-16, 5, -1, -3,-17, -8, -9; /M: SY='E'; M= -1, 0,-24, 0, 15,-25,-16, -6,-19, 11,-17, -9, -1,-11, 13, 5, 0, -6,-16,-25,-14, 14; /I: I=-6; MI=-32; MD=-32; IM=-32; /M: SY='R'; M= -5, -1,-26, 1, 13,-24,-15, -7,-24, 18,-19,-11, -1,-12, 7, 19, -3, -7,-17,-24,-14, 9; D=-6; /I: I=-6; MI=-32; IM=-32; DM=-32; /M: SY='D'; M=-10, 6,-25, 12, 8,-19,-19, -7,-13, -7, 0, -6, -4,-16, 1, -7,-10, -9,-13,-27,-11, 4; /M: SY='R'; M=-11, -6,-29, -6, 3,-22,-20, -5,-23, 27,-19, -7, -4,-15, 9, 28,-10,-10,-17,-15, -6, 5; /M: SY='E'; M= 4, -6,-22, -7, 5,-20,-17, -9,-13, 5,-11, -6, -7,-13, 5, 1, -3, -4, -8,-23,-11, 5; /M: SY='R'; M=-13, -3,-27, -2, 9,-23,-20, -4,-20, 16,-14, -6, -2,-15, 12, 25, -8, -9,-16,-23,-11, 9; /M: SY='Y'; M=-19,-14,-29,-15,-14, 14,-26, 40, -9,-11, -5, 0,-11,-27, -4, -7,-16,-13,-16, 10, 55,-13; /M: SY='E'; M=-11, 1,-27, 3, 18,-20,-20, -1,-16, 6, -9, -1, -2,-12, 10, 6, -8, -9,-17,-26,-11, 13; /M: SY='R'; M= -5, -2,-24, -2, 5,-22,-16, -8,-20, 15,-17, -9, -1,-14, 4, 18, -3, -5,-13,-25,-13, 3; /M: SY='E'; M= -5, 9,-25, 14, 27,-27,-16, -2,-23, 5,-18,-14, 3, -8, 10, -2, -1, -8,-21,-29,-16, 18; /M: SY='M'; M=-12,-16,-24,-21,-15, 5,-24, 3, 7,-10, 7, 18,-13,-21, -8, -9,-16, -9, 1,-11, 15,-13; /I: I=-6; MI=-32; MD=-32; IM=-32; /M: SY='P'; M= -2, -5,-28, -2, 4,-27,-14,-12,-21, 7,-23,-13, -5, 17, 2, 0, -1, -5,-20,-27,-19, 1; D=-6; /I: I=-6; MI=-32; IM=-32; DM=-32; /M: SY='D'; M= -3, 12,-24, 13, 9,-25, -6, -3,-24, 1,-20,-16, 9,-12, 2, -2, 3, -3,-20,-30,-17, 5; /M: SY='Y'; M=-18,-20,-29,-22,-18, 24,-27, 6, -4,-11, -2, -2,-19,-28,-12,-11,-21,-12,-12, 33, 54,-17; /M: SY='K'; M=-10, -3,-27, -5, 4,-19,-18, -8,-16, 16,-16, -6, 0,-14, 2, 16, -8, -8,-12,-22,-10, 2; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 515 in 439 different sequences |
| Number of true positive hits | 514 in 438 different sequences |
| Number of 'unknown' hits | 1 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 27 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 95.01 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | K_Hofmann, N_Hulo |
| Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 6 |
| Feature key [info] | DNA_BIND |
| Feature description [info] | HMG box |
| Version [info] | 6 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
438 sequences
ABF2_YEAST (Q02486 ), ADW2_ALLMI (P40634 ), ADW4_ALLMI (P40635 ), ADW5_ALLMI (P40636 ), AES1_ALLMI (P40637 ), AES2_ALLMI (P40638 ), AES4_ALLMI (P40639 ), AES6_ALLMI (P40640 ), AMA1_ALLMI (P40641 ), AMA2_ALLMI (P40642 ), AMA3_ALLMI (P40643 ), BBX_HUMAN (Q8WY36 ), BBX_MOUSE (Q8VBW5 ), CH01_CHICK (P40665 ), CH02_CHICK (P40666 ), CH03_CHICK (P40667 ), CH04_CHICK (P40668 ), CH07_CHICK (P40669 ), CH31_CHICK (P40670 ), CH32_CHICK (P40671 ), CIC_DROME (Q9U1H0 ), CIC_HUMAN (Q96RK0 ), CIC_MOUSE (Q924A2 ), CMB1_SCHPO (Q10241 ), DICH_DROME (Q24533 ), EGL13_CAEEL (Q23045 ), FPR1_PODAS (P35693 ), HBP1_BOVIN (Q2KJ34 ), HBP1_HUMAN (O60381 ), HBP1_MOUSE (Q8R316 ), HBP1_PONAB (Q5R7I3 ), HBP1_RAT (Q62661 ), HGB1A_HUMAN (B2RPK0 ), HM20A_CHICK (Q5ZKF4 ), HM20A_HUMAN (Q9NP66 ), HM20A_MOUSE (Q9DC33 ), HM20A_XENLA (Q6AZF8 ), HM20A_XENTR (Q6DIJ5 ), HM20B_BOVIN (Q32L68 ), HM20B_HUMAN (Q9P0W2 ), HM20B_MOUSE (Q9Z104 ), HMG10_ARATH (Q9LTT3 ), HMG11_ARATH (Q9LG02 ), HMG12_ARATH (Q941D1 ), HMG13_ARATH (Q9T012 ), HMG14_ARATH (O64702 ), HMG15_ARATH (Q9MAT6 ), HMG1A_CHITE (P40622 ), HMG1B_CHITE (P40623 ), HMG2_DROME (Q24537 ), HMG5_CAEEL (Q94234 ), HMGB1_ARATH (O49595 ), HMGB1_BOVIN (P10103 ), HMGB1_CALJA (B0CM99 ), HMGB1_CANLF (Q6YKA4 ), HMGB1_CHICK (Q9YH06 ), HMGB1_CRIGR (P07156 ), HMGB1_HORSE (Q08IE6 ), HMGB1_HUMAN (P09429 ), HMGB1_MACFA (Q4R844 ), HMGB1_MOUSE (P63158 ), HMGB1_PAPAN (A9RA84 ), HMGB1_PIG (P12682 ), HMGB1_PLEMO (B1MTB0 ), HMGB1_RAT (P63159 ), HMGB2_ARATH (O49596 ), HMGB2_BOVIN (P40673 ), HMGB2_CHICK (P26584 ), HMGB2_HUMAN (P26583 ), HMGB2_MOUSE (P30681 ), HMGB2_PIG (P17741 ), HMGB2_RAT (P52925 ), HMGB3_ARATH (P93047 ), HMGB3_BOVIN (Q32L31 ), HMGB3_CHICK (P40618 ), HMGB3_HUMAN (O15347 ), HMGB3_MOUSE (O54879 ), HMGB4_ARATH (Q42344 ), HMGB4_BOVIN (Q32L34 ), HMGB4_HUMAN (Q8WW32 ), HMGB4_MOUSE (Q6P8W9 ), HMGB5_ARATH (O49597 ), HMGB6_ARATH (Q9SUP7 ), HMGB7_ARATH (Q8LDF9 ), HMGB9_ARATH (Q9SGS2 ), HMGBH_CAEEL (Q09390 ), HMGB_TETTH (P40626 ), HMGC_TETTH (P11873 ), HMGD_DROME (Q05783 ), HMGH_IIV6 (P40628 ), HMGH_STRPU (P40644 ), HMGL_IPONI (P40619 ), HMGL_SOYBN (P26585 ), HMGL_TRYBR (P26586 ), HMGL_VICFA (P40620 ), HMGL_WHEAT (P40621 ), HMGT_ONCMY (P07746 ), HMGX3_HUMAN (Q12766 ), HMGX4_HUMAN (Q9UGU5 ), HMGX4_XENLA (Q6WKW9 ), HMGX4_XENTR (Q5BL56 ), HMGZ_DROME (Q06943 ), HMG_TETPY (P40625 ), HMO1_CANAL (Q59PR9 ), HMO1_YEAST (Q03973 ), IXR1_YEAST (P33417 ), LEF1_HUMAN (Q9UJU2 ), LEF1_MOUSE (P27782 ), LEF1_RAT (Q9QXN1 ), LG27_EUBMA (P40654 ), LG28_EUBMA (P40655 ), LSD1_SCHPO (Q9Y802 ), LSD2_SCHPO (Q10135 ), MAEL_AEDAE (Q16YA8 ), MAEL_CULQU (B0W2W6 ), MAEL_DROMO (B4KVI7 ), MAEL_DROVI (B4LF72 ), MAEL_PIG (A4UTQ0 ), MAT2_COCHE (Q02991 ), MAT2_COCSA (Q9P445 ), MATB_NEUCS (P36981 ), MATD_NEUCR (Q10116 ), MATMC_SCHKA (Q6WRX6 ), MATMC_SCHPM (C7U331 ), MATMC_SCHPO (P0CY17 ), MEIOS_HUMAN (C9JSJ3 ), MEIOS_MOUSE (A0A5K7RLP0), MG42_TARMA (P40651 ), MG43_TARMA (P40652 ), MG44_TARMA (P40653 ), MLH_TETTS (P40631 ), MNB1B_MAIZE (P27347 ), MTMC3_SCHPO (P0CY16 ), NHP10_YEAST (Q03435 ), NHP1_BABBO (P40632 ), NHP6A_YEAST (P11632 ), NHP6B_YEAST (P11633 ), NHP6_ASHGO (Q75B82 ), NHP6_ASPFU (Q4WY33 ), NHP6_CANAL (Q9UVL1 ), NHP6_CRYNB (P0CO25 ), NHP6_CRYNJ (P0CO24 ), NHP6_DEBHA (Q6BRB4 ), NHP6_DICDI (Q55C24 ), NHP6_EMENI (Q5B995 ), NHP6_GIBZE (Q4IQX3 ), NHP6_KLULC (Q6CVH3 ), NHP6_NEUCR (Q7S045 ), NHP6_SCHPO (P87057 ), NHP6_USTMA (Q4PBZ9 ), NHP6_YARLI (Q6CC79 ), NSD2_HUMAN (O96028 ), NSD2_MOUSE (Q8BVE8 ), PANG1_DROME (P91943 ), PANG2_DROME (Q8IMA8 ), PB1_CHICK (Q90941 ), PB1_HUMAN (Q86U86 ), PB1_MOUSE (Q8BSQ9 ), PMS1_HUMAN (P54277 ), POP1_CAEBR (A8WWH5 ), POP1_CAEEL (Q10666 ), RFG1_CANAL (Q5A220 ), ROX1_YEAST (P25042 ), S17AA_XENLA (Q3KQ35 ), S17AB_XENLA (Q90ZH9 ), S17B1_XENLA (O42601 ), S17B1_XENTR (Q8AWH2 ), S17B2_XENTR (Q6GLH8 ), S17B3_XENLA (A5D8R3 ), S17B3_XENTR (Q6F2F0 ), SEM2_CAEEL (Q8T3B9 ), SMCE1_HUMAN (Q969G3 ), SMCE1_MOUSE (O54941 ), SMCE1_RAT (Q56A18 ), SMR2_PODAS (Q08143 ), SOX10_CHICK (Q9W757 ), SOX10_HUMAN (P56693 ), SOX10_MOUSE (Q04888 ), SOX10_PIG (A5A763 ), SOX10_RAT (O55170 ), SOX10_XENLA (Q8AXX8 ), SOX10_XENTR (A4IIJ8 ), SOX11_CHICK (P48435 ), SOX11_HUMAN (P35716 ), SOX11_MOUSE (Q7M6Y2 ), SOX11_RAT (P0C1G9 ), SOX11_XENTR (Q66JF1 ), SOX12_HUMAN (O15370 ), SOX12_MOUSE (Q04890 ), SOX12_XENLA (Q8AXQ4 ), SOX13_HUMAN (Q9UN79 ), SOX13_MOUSE (Q04891 ), SOX13_XENLA (P40649 ), SOX13_XENTR (Q28EW4 ), SOX14_CHICK (Q9W7R6 ), SOX14_DANRE (Q32PP9 ), SOX14_DROME (P40656 ), SOX14_HUMAN (O95416 ), SOX14_MACFA (P61259 ), SOX14_MOUSE (Q04892 ), SOX14_XENLA (B0ZTE2 ), SOX14_XENTR (A4QNG3 ), SOX15_DROME (P40657 ), SOX15_HUMAN (O60248 ), SOX15_MOUSE (P43267 ), SOX16_MOUSE (Q62247 ), SOX17_HUMAN (Q9H6I2 ), SOX17_MOUSE (Q61473 ), SOX18_HUMAN (P35713 ), SOX18_MOUSE (P43680 ), SOX18_XENTR (B3DLD3 ), SOX19_MOUSE (Q62249 ), SOX1A_DANRE (Q6DGL6 ), SOX1B_DANRE (Q2Z1R2 ), SOX1_CHICK (O57401 ), SOX1_HUMAN (O00570 ), SOX1_MOUSE (P53783 ), SOX1_PLEWA (P37839 ), SOX1_XENLA (Q2PG84 ), SOX1_XENTR (A2TED3 ), SOX21_CHICK (Q9W7R5 ), SOX21_HUMAN (Q9Y651 ), SOX21_MOUSE (Q811W0 ), SOX21_XENLA (B0ZTE1 ), SOX2_CAEEL (Q21305 ), SOX2_CHICK (P48430 ), SOX2_DANRE (Q6P0E1 ), SOX2_HUMAN (P48431 ), SOX2_MOUSE (P48432 ), SOX2_SHEEP (P54231 ), SOX2_XENLA (O42569 ), SOX2_XENTR (Q6NVN0 ), SOX30_HUMAN (O94993 ), SOX30_MACFA (Q8WNV5 ), SOX30_MOUSE (Q8CGW4 ), SOX3A_XENLA (P55863 ), SOX3B_XENLA (Q5FWM3 ), SOX3_CAEEL (Q20201 ), SOX3_CHICK (P48433 ), SOX3_DANRE (Q6EJB7 ), SOX3_HUMAN (P41225 ), SOX3_MOUSE (P53784 ), SOX3_XENTR (Q68FA4 ), SOX4_HUMAN (Q06945 ), SOX4_MOUSE (Q06831 ), SOX5_HUMAN (P35711 ), SOX5_MOUSE (P35710 ), SOX5_RAT (F1M8W4 ), SOX5_XENLA (P40647 ), SOX5_XENTR (B3DM43 ), SOX6_HUMAN (P35712 ), SOX6_MOUSE (P40645 ), SOX6_PONAB (Q5RCU4 ), SOX6_RAT (A0A0G2JTZ2), SOX6_XENTR (B1H349 ), SOX7_HUMAN (Q9BT81 ), SOX7_MOUSE (P40646 ), SOX7_XENLA (O42342 ), SOX7_XENTR (Q28GD5 ), SOX8_CHICK (P57074 ), SOX8_HUMAN (P57073 ), SOX8_MOUSE (Q04886 ), SOX8_TETNG (Q6IZ48 ), SOX8_XENLA (Q6VVD7 ), SOX9A_XENLA (B7ZR65 ), SOX9B_XENLA (Q6DFF5 ), SOX9_CALJA (Q9BG91 ), SOX9_CANLF (Q7YRJ7 ), SOX9_CHICK (P48434 ), SOX9_HUMAN (P48436 ), SOX9_MACMU (P61753 ), SOX9_MOUSE (Q04887 ), SOX9_PANTR (Q9BG89 ), SOX9_PIG (O18896 ), SOX9_PONPY (P61754 ), SOX9_RAT (F1LYL9 ), SOX9_XENTR (Q6F2E7 ), SP100_GORGO (Q9N1Q6 ), SP100_HUMAN (P23497 ), SP100_HYLLA (Q9N1Q5 ), SP100_PANTR (Q9N1Q7 ), SRY_AKOAZ (P36388 ), SRY_ALCAC (Q863D9 ), SRY_APOAG (O55063 ), SRY_APOFL (O55062 ), SRY_ARCAU (Q6T723 ), SRY_ARCFO (Q6T724 ), SRY_ARCGZ (Q6TC44 ), SRY_AXIPR (Q863C2 ), SRY_BALAC (Q864R2 ), SRY_BALBN (Q864R1 ), SRY_BALMU (Q864R0 ), SRY_BALPH (Q864Q9 ), SRY_BISBI (Q8SPQ2 ), SRY_BISBO (Q27949 ), SRY_BOSGF (Q7JGF9 ), SRY_BOSIN (Q7JGF7 ), SRY_BOSJA (Q8SPQ1 ), SRY_BOSMU (Q9XS37 ), SRY_BOVIN (Q03255 ), SRY_BUBBU (Q69FB1 ), SRY_CALJA (P51501 ), SRY_CALUR (Q6TC43 ), SRY_CANLF (Q9XT60 ), SRY_CAPHI (Q03256 ), SRY_CERNI (Q9BH08 ), SRY_CROSU (Q95175 ), SRY_CYSCR (Q6TC37 ), SRY_DELDE (Q864P9 ), SRY_DELLE (Q864Q3 ), SRY_ELADA (Q863B7 ), SRY_ENHLU (Q6TC27 ), SRY_ERIBA (Q6TC30 ), SRY_EUBAS (Q864Q7 ), SRY_EUMJU (Q6TC46 ), SRY_FELCA (Q6TC50 ), SRY_GLOMA (Q864P4 ), SRY_GORGO (P48046 ), SRY_GRAGR (Q864P7 ), SRY_HALGR (P36390 ), SRY_HORSE (P36389 ), SRY_HUMAN (Q05066 ), SRY_HYDLE (Q6TC40 ), SRY_HYLLA (Q28447 ), SRY_KOGSI (Q864Q5 ), SRY_LAGOL (Q864P8 ), SRY_LUTLU (Q6TC28 ), SRY_MACFA (P36391 ), SRY_MACMU (Q9BG90 ), SRY_MEGNO (Q864Q8 ), SRY_MELME (P36392 ), SRY_MESST (Q864Q4 ), SRY_MIRAN (Q6TC39 ), SRY_MIRLE (Q6TC38 ), SRY_MOSBE (Q67EX7 ), SRY_MOSCH (Q67EX6 ), SRY_MOUSE (Q05738 ), SRY_MUSSI (Q62565 ), SRY_MUSSP (Q62563 ), SRY_NEOAN (Q95202 ), SRY_NEOPH (Q864Q1 ), SRY_NEOSC (Q6TC41 ), SRY_ORCBR (Q864P3 ), SRY_ORCOR (Q864P5 ), SRY_PAGGO (Q6TC36 ), SRY_PANPA (Q28778 ), SRY_PANTR (Q28798 ), SRY_PENEL (Q864P6 ), SRY_PHOLR (Q6TC31 ), SRY_PHOPH (Q864Q2 ), SRY_PHOVI (Q6TC33 ), SRY_PHYMC (Q864Q6 ), SRY_PIG (P36393 ), SRY_PONPY (Q28783 ), SRY_PRZAL (Q863C0 ), SRY_PUSCA (Q6TC34 ), SRY_PUSHI (Q6TC32 ), SRY_RAT (P36394 ), SRY_SHEEP (Q03257 ), SRY_SMIMA (P36395 ), SRY_TURTR (Q864Q0 ), SRY_URSAR (P36396 ), SRY_ZALCA (Q6TC45 ), SSP1A_CAEEL (P41848 ), SSP1A_ORYSJ (Q9LGR0 ), SSP1B_CAEEL (O01683 ), SSP1B_ORYSJ (Q65WY8 ), SSRP1_ARATH (Q05153 ), SSRP1_CATRO (Q39601 ), SSRP1_CHICK (Q04678 ), SSRP1_CIOIN (Q4H2R2 ), SSRP1_DROME (Q05344 ), SSRP1_DROPS (Q293F6 ), SSRP1_HUMAN (Q08945 ), SSRP1_MAIZE (Q9LEF5 ), SSRP1_MOUSE (Q08943 ), SSRP1_RAT (Q04931 ), SSRP1_VICFA (O04235 ), SSRP1_XENLA (Q9W602 ), STE11_PNECA (Q870J1 ), STE11_SCHPO (P36631 ), SX11A_XENLA (Q91731 ), SX11B_XENLA (P40650 ), SX17A_XENTR (Q8AWH3 ), SX18A_XENLA (Q90ZH8 ), SX18B_XENLA (Q90ZH7 ), SX19A_DANRE (P47792 ), SX19B_DANRE (Q9DDD7 ), SX21A_DANRE (Q7SZS1 ), SX21B_DANRE (Q6RVD7 ), T7L1A_DANRE (Q9YHE8 ), T7L1A_XENLA (P70062 ), T7L1B_DANRE (Q800Q5 ), T7L1B_XENLA (Q90ZB6 ), T7L1C_XENLA (P70063 ), T7L1D_XENLA (P70064 ), TCF7_HUMAN (P36402 ), TCF7_MOUSE (Q00417 ), TF7L1_HUMAN (Q9HCS4 ), TF7L1_MOUSE (Q9Z1J1 ), TF7L1_XENTR (Q6GL68 ), TF7L2_HUMAN (Q9NQB0 ), TF7L2_MOUSE (Q924A0 ), TFAM_BOVIN (Q0II87 ), TFAM_HUMAN (Q00059 ), TFAM_MOUSE (P40630 ), TFAM_PIG (Q5D144 ), TFAM_RAT (Q91ZW1 ), TFAM_TRACR (Q4H0T5 ), TOX2_HUMAN (Q96NM4 ), TOX2_RAT (Q76IQ7 ), TOX3_HUMAN (O15405 ), TOX3_MOUSE (Q80W03 ), TOX3_RAT (B7SBD2 ), TOX4A_XENLA (Q6DJL0 ), TOX4B_XENLA (Q6IRR0 ), TOX4_BOVIN (Q0P5K4 ), TOX4_HUMAN (O94842 ), TOX4_MOUSE (Q8BU11 ), TOX4_PONAB (Q5R6A9 ), TOX4_RAT (Q99PM1 ), TOX4_XENTR (A4QNP0 ), TOX_HUMAN (O94900 ), TOX_MOUSE (Q66JW3 ), UBF1A_XENLA (P25979 ), UBF1B_XENLA (P25980 ), UBF1_HUMAN (P17480 ), UBF1_MOUSE (P25976 ), UBF1_RAT (P25977 ), UBFL1_HUMAN (P0CB47 ), UBFL1_MOUSE (Q3USZ2 ), UBFL6_HUMAN (P0CB48 ), VF401_IIV3 (Q196Z2 ), WDHD1_HUMAN (O75717 ), WDHD1_MOUSE (P59328 ), WDHD1_XENLA (O13046 ), YHHB_SCHPO (Q9USU7 ), YR545_MIMIV (Q5UQA4 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
27 sequences
MAEL1_DROAN (B3MB79 ), MAEL1_DROPE (B4GN46 ), MAEL1_DROPS (B5DR03 ), MAEL2_DROAN (B3MZY6 ), MAEL2_DROPE (B4GN43 ), MAEL2_DROPS (B5DRY3 ), MAEL_BOVIN (Q32KV2 ), MAEL_DROER (B3NEF0 ), MAEL_DROGR (B4J3A3 ), MAEL_DROME (Q9VNS0 ), MAEL_DROSE (B4IB36 ), MAEL_DROSI (B4QL99 ), MAEL_DROYA (B4PIP5 ), MAEL_HUMAN (Q96JY0 ), MAEL_MACFA (Q4R786 ), MAEL_MOUSE (Q8BVN9 ), MAEL_XENTR (Q08D62 ), MATA2_CANAL (Q71U11 ), MATA2_KLULC (Q9HG13 ), MATA2_YARLL (O93958 ), MATPC_SCHKA (Q6WRX9 ), MATPC_SCHPM (P10841 ), TAF1_HUMAN (P21675 ), TAF1_MESAU (Q60544 ), TAF1_MOUSE (Q80UV9 ), YF98_SCHPO (O42648 ), YGM4_SCHPO (O42953 )» more |
| UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
SPP41_YEAST (P38904 ) |
| PDB [Detailed view] |
109 PDB
1AAB; 1CG7; 1CKT; 1E7J; 1GT0; 1HMA; 1HME; 1HMF; 1HRY; 1HRZ; 1HSM; 1HSN; 1I11; 1J3C; 1J3D; 1J3X; 1J46; 1J47; 1J5N; 1K99; 1L8Y; 1L8Z; 1LWM; 1NHM; 1NHN; 1O4X; 1QRV; 1V63; 1V64; 1WGF; 1WXL; 1WZ6; 2CO9; 2CRJ; 2CS1; 2CTO; 2D7L; 2E6O; 2EQZ; 2GZK; 2HDZ; 2LE4; 2LEF; 2LHJ; 2LY4; 2RTU; 2YQI; 2YRQ; 2YUL; 3F27; 3FGH; 3NM9; 3TMM; 3TQ6; 3U2B; 4A3N; 4EUW; 4NNU; 4NOD; 4QR9; 4S2Q; 4Y60; 5JGH; 5JH0; 5VWE; 5ZDZ; 5ZE0; 5ZE1; 5ZE2; 6CG0; 6CIJ; 6CIK; 6CIL; 6CIM; 6EDB; 6ERP; 6ERQ; 6HB4; 6HC3; 6HT5; 6JRP; 6L34; 6L6Y; 6LTH; 6LTJ; 6OEM; 6OEN; 6OEO; 6OER; 6T78; 6T7A; 6T7B; 6T7C; 6T7D; 6T90; 6UPK; 6UPL; 6WX7; 6WX8; 6WX9; 6XTY; 6YOV; 7CYU; 7JJK; 7LBW; 7LBX; 7PFO; 7PLO; 7VDV » more |
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