PROSITE entry PS50940
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General information about the entry
| Entry name [info] | CHIT_BIND_II |
| Accession [info] | PS50940 |
| Entry type [info] | MATRIX |
| Date [info] |
01-NOV-2003 CREATED;
01-JUL-2016 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50940 |
| Associated ProRule [info] | PRU00144 |
Name and characterization of the entry
| Description [info] | Chitin-binding type-2 domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=57; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=57; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.5475686; R2=0.0126845; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=462; N_SCORE=8.4; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=257; N_SCORE=5.8; MODE=1; TEXT='RR'; /DEFAULT: M0=-9; D=-40; I=-40; B1=-150; E1=-60; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='S'; M= -2, -1,-100, -1, -1, -17, -10, -9, -15, -6, -15, -11, -1, -6, -5, -8, 3, 0, -11, -27, -13, -4; /M: SY='N'; M= -8, 0,-100, -2, -3, -9, -9, -9, -15, -8, -14, -11, 3, -9, -8, -9, -2, -3, -15, -24, -10, -6; /M: M= -5, -7,-100, -8, -4, -13, -19, -12, -5, -7, -7, -5, -7, -10, -6, -8, -3, -1, -3, -25, -8, -6; /M: SY='C'; M= -9, -20, 117, -30, -29, -20, -30, -30, -30, -30, -20, -20, -20, -39, -29, -30, -9, -9, -10, -50, -30, -29; /M: SY='P'; M= -2, -4,-100, -4, 2, -22, -12, -11, -17, -1, -18, -11, -3, 5, 0, -4, 2, 0, -15, -27, -16, 0; /M: SY='N'; M= -5, 3,-100, 3, 2, -20, -2, -6, -19, -6, -18, -13, 5, -9, -3, -7, 2, -4, -17, -28, -15, -1; /M: M= -6, -4,-100, -4, -1, -18, -7, -8, -16, -1, -13, -7, -3, -14, -1, -1, -4, -6, -13, -22, -11, -2; /M: M= -4, -1,-100, -1, -1, -17, -6, -9, -17, -5, -17, -12, 0, -8, -4, -7, 0, -4, -14, -25, -13, -3; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MI=0; MD=-27; IM=0; DM=-27; /M: SY='G'; M= -5, -1,-100, -3, -10, -18, 18, -10, -22, -10, -19, -13, 4, -17, -10, -9, -1, -9, -18, -21, -15, -10; D=-10; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; DM=-27; /M: M= -6, -8,-100, -11, -8, -5, -10, -8, -11, -8, -9, -6, -5, -16, -8, -8, -3, -2, -9, -17, -2, -8; /I: I=-9,-9,-90,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9; MD=-23; /M: SY='Y'; M= -10, -14,-100, -17, -14, 13, -19, -5, 2, -12, 4, 2, -10, -19, -12, -9, -10, -4, 0, -4, 14, -13; D=-9; /I: I=-9,-9,-90,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9; MI=0; MD=-23; IM=0; DM=-23; /M: SY='F'; M= -4, -16,-100, -19, -14, 9, -18, -10, 6, -13, 6, 4, -14, -16, -14, -12, -11, -5, 5, -7, 6, -14; D=-9; /I: I=-9,-9,-90,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9; DM=-23; /M: SY='P'; M= 2, -10,-100, -8, -3, -18, -8, -14, -14, -7, -16, -11, -9, 23, -6, -11, -2, -4, -14, -21, -17, -7; D=-9; /I: I=-9,-9,-90,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9,-9; DM=-23; /M: SY='D'; M= -9, 10,-100, 13, 0, -17, -14, 13, -20, -6, -18, -13, 7, -13, -3, -8, 0, -5, -17, -26, 0, -3; /M: SY='P'; M= -4, -8,-100, -5, 1, -21, -13, -9, -17, -7, -20, -13, -7, 23, -4, -11, -2, -6, -19, -27, -17, -4; /M: SY='N'; M= -5, 1,-100, -1, 1, -15, -7, -7, -18, -3, -15, -11, 2, -13, -3, -4, 1, 0, -15, -23, -9, -2; /M: SY='D'; M= -9, 23,-100, 24, 5, -25, -5, -1, -25, -3, -24, -19, 19, -14, -1, -5, 6, -1, -21, -34, -16, 1; /M: SY='C'; M= -8, -19, 105, -28, -28, -20, -28, -28, -27, -28, -19, -18, -19, -36, -27, -28, -8, -8, -9, -48, -28, -28; /M: SY='S'; M= -1, 5,-100, 3, 2, -22, -7, -2, -21, 0, -22, -13, 9, -13, 6, 1, 10, 4, -17, -29, -14, 3; /M: SY='K'; M= -5, -3,-100, -4, 0, -20, -9, -7, -19, 7, -18, -9, 0, -12, 2, 5, 0, -4, -15, -23, -11, 0; /I: I=-12,-12,-120,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12; MI=0; MD=-32; IM=0; DM=-32; /M: SY='Y'; M= -19, -24,-100, -28, -23, 44, -29, 3, -1, -17, 2, -1, -21, -30, -21, -14, -30, -11, -7, 27, 57, -23; /M: SY='Y'; M= -14, -21,-100, -24, -21, 18, -27, 3, 5, -18, 6, 4, -18, -27, -15, -15, -17, -29, 0, 3, 33, -20; /M: SY='Y'; M= -9, -13,-100, -16, -7, -5, -23, -6, -1, -5, -2, 1, -11, -20, -2, -2, -8, -4, -1, -15, 4, -6; /M: SY='C'; M= -10, -20, 120, -30, -30, -20, -30, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30; /M: M= -3, -8,-100, -9, -6, -12, -17, -11, -4, -8, -6, -4, -7, -17, -5, -8, -2, -1, -1, -23, -8, -6; /M: SY='N'; M= -6, 10,-100, 9, 2, -20, -3, -2, -23, -2, -22, -16, 11, -13, -2, -5, 3, -5, -21, -25, -12, -1; /M: SY='G'; M= -3, -1,-100, -2, -8, -25, 28, -12, -28, -10, -23, -16, 5, -15, -9, -12, 1, -11, -23, -25, -22, -9; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MD=-25; /M: M= -7, -3,-100, -4, -1, -18, -8, -6, -15, -2, -15, -8, -1, -16, -1, -1, -3, -6, -12, -24, -11, -2; D=-10; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MI=0; MD=-25; IM=0; DM=-25; /M: SY='P'; M= 1, -15,-100, -16, -9, -11, -14, -17, -7, -11, -7, -6, -13, 2, -10, -13, -5, -4, -7, -16, -11, -11; /M: SY='Y'; M= -7, -15,-100, -17, -10, -5, -22, -8, 0, -8, -2, 0, -12, -20, -7, -6, -8, -3, 1, -15, 2, -10; /M: M= -5, -12,-100, -13, -4, -10, -21, -10, -3, -8, -2, -1, -11, -12, -6, -7, -8, -5, -3, -20, -6, -6; /M: M= -8, -11,-100, -14, -8, -4, -10, -6, -9, -7, -5, 0, -7, -19, -4, -4, -8, -7, -9, -16, -2, -7; /M: SY='S'; M= -6, 1,-100, -1, 1, -17, -15, -6, -16, -1, -16, -10, 4, -13, 3, -1, 5, 5, -13, -26, -9, 1; /M: SY='C'; M= -10, -20, 117, -30, -29, -20, -29, -30, -30, -30, -20, -20, -20, -39, -29, -30, -10, -10, -10, -50, -30, -29; /M: SY='P'; M= -3, -11,-100, -6, -1, -25, -9, -15, -20, -8, -23, -16, -10, 37, -6, -14, -2, -6, -22, -28, -22, -6; /M: SY='E'; M= -2, 2,-100, 2, 4, -21, -8, -10, -19, -2, -19, -14, 3, -4, -2, -6, 2, -2, -16, -27, -16, 1; /M: SY='G'; M= -4, 2,-100, 1, -9, -25, 37, -12, -32, -12, -27, -19, 8, -17, -11, -13, 2, -12, -27, -24, -22, -10; /M: SY='L'; M= -8, -10,-100, -12, -5, -3, -22, -6, -4, -10, 6, 2, -10, -19, -4, -7, -7, 3, -6, -20, 1, -5; /M: SY='Y'; M= -5, -17,-100, -20, -16, 6, -22, -1, 2, -15, 2, 2, -14, -23, -12, -13, -11, -6, 3, -10, 14, -15; /M: SY='F'; M= -19, -28,-100, -35, -27, 60, -29, -13, -2, -24, 5, -2, -22, -30, -31, -18, -22, -12, -5, 27, 39, -26; /M: SY='D'; M= -11, 33,-100, 34, 8, -27, -6, 4, -27, -2, -28, -22, 30, -14, 0, -6, 8, -2, -25, -37, -18, 4; /I: I=-11,-11,-110,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11; MI=0; MD=-29; IM=0; DM=-29; /M: SY='E'; M= -2, -6,-100, -5, 4, -20, -16, -11, -14, -2, -16, -10, -6, 4, 0, -5, -1, -3, -12, -25, -14, 1; /I: I=-12,-12,-120,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12,-12; MD=-32; /M: SY='E'; M= -2, 1,-100, -1, 4, -19, -15, -7, -13, 0, -14, -10, 1, -12, 1, -2, 3, 1, -10, -26, -12, 2; D=-12; /I: I=-11,-11,-110,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11,-11; MI=0; MD=-29; IM=0; DM=-29; /M: SY='T'; M= -4, -8, 0, -11, -6, -11, -19, -10, -6, -7, -3, -3, -5, -17, -3, -4, 1, 7, -4, -25, -7, -5; /M: SY='Q'; M= -6, -2,-100, 10, 1, -23, 3, -5, -23, 1, -18, -10, 10, -15, 5, 2, -2, -9, -21, -24, -15, 3; /M: M= -4, -8, 0, -12, -6, -12, -16, -9, -7, -3, -9, -2, -5, -16, -2, -2, -1, 0, -5, -22, -6, -5; /M: SY='C'; M= -10, -20, 119, -30, -30, -20, -29, -30, -30, -30, -20, -20, -20, -40, -30, -30, -10, -10, -10, -50, -30, -30; /M: SY='D'; M= -8, 4,-100, 20, -2, -18, -15, -11, -9, -7, -9, -7, 10, -17, -7, -9, -3, -2, -3, -29, -13, -5; /M: SY='W'; M= -8, -13,-100, -13, -9, -4, -19, -8, -11, -11, -10, -8, -13, -5, -9, -11, -10, -7, -12, 20, 5, -10; /M: SY='P'; M= -3, -4,-100, -2, -1, -20, -12, -10, -19, -3, -20, -13, -4, 9, -3, -6, -1, -3, -17, -22, -14, -3; /M: SY='E'; M= -4, 2,-100, 3, 4, -18, -12, -5, -17, -3, -16, -11, 1, -12, 0, -5, 2, -2, -13, -23, -11, 1; /M: SY='N'; M= -6, 5,-100, 3, 4, -18, -11, -4, -17, -2, -16, -11, 6, -8, 2, -5, 1, -2, -17, -27, -11, 2; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MD=-25; /M: SY='V'; M= 4, -11,-100, -13, -12, -9, -13, -15, 1, -12, -5, -3, -10, -13, -13, -13, 0, 1, 8, -23, -10, -13; D=-10; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; MI=0; MD=-25; IM=0; DM=-25; /M: SY='D'; M= -4, 3,-100, 4, 4, -21, -8, -5, -16, 0, -16, -10, 3, -10, 2, -2, 1, -4, -13, -25, -13, 3; D=-10; /I: I=-10,-10,-100,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10,-10; DM=-25; /M: SY='C'; M= -8, -18, 106, -28, -27, -19, -28, -28, -28, -27, -19, -19, -18, -37, -27, -27, -8, -8, -10, -47, -28, -28; /M: SY='S'; M= -4, -3,-100, -3, -2, -16, -11, -9, -15, -5, -14, -10, -2, -9, -3, -5, 2, 1, -12, -25, -10, -4; D=-5; /M: M= -5, 0,-100, 0, -1, -18, -8, -9, -17, -5, -15, -11, 0, -9, -4, -7, 0, -4, -14, -24, -13, -3; D=-5; /I: E1=0; IE=-105; DE=-105;» more |
Post-processing [info]
| COMPETES_HIT_WITH | PS51807 |
Numerical results [info]
| Total number of hits | 82 in 38 different sequences |
| Number of true positive hits | 82 in 38 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 2 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 97.62 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | N_Hulo |
| Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 12 |
| Feature key [info] | DOMAIN |
| Feature description [info] | Chitin-binding type-2 |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
38 sequences
AC150_NPVAC (P41707), AC83_NPVAC (Q06670), ALL12_BLOTA (Q17282), AVR4_PASFU (Q00363), CBD1_CAEEL (O45599), CDA1_BOMMO (H9J9M0), CHI10_DROME (Q9W5U2), CHIA_BOVIN (Q95M17), CHIA_HUMAN (Q9BZP6), CHIA_MOUSE (Q91XA9), CHIA_RAT(Q6RY07), CHIT1_HUMAN (Q13231), CHIT1_MOUSE (Q9D7Q1), CHIT_BRUMA (P29030), CHIT_CAEEL (Q11174), CHIT_MANSE (P36362), CHL18_DERPT (Q4JK71), CPG1_CAEBR (A8WVU7), CPG1_CAEEL (Q17802), CPG2_CAEBR (A8XWX5), CPG2_CAEEL (P41996), DEP23_DERPT (L7N6F8), OBSTE_DROME (Q9VMM6), PE1_ANOGA (O76217), PE44_LUCCU (Q25255), PE48A_LUCCU (P91745), PE48_CHRBE (O17450), PE55_LUCCU (Q95UE8), PIF_PINFU (C7G0B5), PIF_PINMG (H2A0N4), TX11A_CORWE (P0DPW5), TX11A_ETHRU (P0DPW4), TX11A_THELO (P0DPW3), VP91_NPVBM (O92446), VP91_NPVCF (Q7TLR9), VP91_NPVEP (Q91GH8), VP91_NPVOP (O10336), Y091_NPVOP (O10341)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
2 sequences
CHL18_DERFA (Q86R84), YMV2_CAEEL (P34504) |
| PDB [Detailed view] |
7 PDB
1WAW; 1WB0; 2MFK; 4ZCE; 5HBF; 6BN0; 6SO0 |