PROSITE entry PS51226
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General information about the entry
| Entry name [info] | TEP1_N |
| Accession [info] | PS51226 |
| Entry type [info] | MATRIX |
| Date [info] |
01-JUL-2006 CREATED;
01-OCT-2013 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51226 |
| Associated ProRule [info] | PRU00575 |
Name and characterization of the entry
| Description [info] | TEP1 N-terminal repeat profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=30; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=30; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.8410422; R2=0.0093041; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=770; N_SCORE=9.0; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=415; N_SCORE=5.7; MODE=1; TEXT='R?'; /DEFAULT: M0=-8; D=-50; I=-50; B1=-200; E1=-200; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='L'; M= -9,-24,-19,-28,-19, 5,-26,-13, 17,-21, 34, 31,-24,-25,-12,-16,-22, -4, 9,-21, -1,-16; /M: SY='E'; M=-10, 10,-30, 20, 60,-30,-20, 0,-30, 10,-20,-20, 0, 0, 20, 0, 0,-10,-30,-30,-20, 40; /M: SY='K'; M=-11, -1,-30, -1, 9,-29,-20, -9,-30, 48,-29,-10, 0,-11, 10, 34,-10,-10,-20,-20,-10, 9; /M: SY='L'; M=-10,-29,-26,-30,-20, 1,-31,-23, 23,-27, 29, 14,-26, -9,-19,-23,-24,-10, 10,-21, -4,-21; /M: SY='H'; M=-16, -2, 25, -4, -9,-22,-23, 43,-31,-16,-21,-10, 0,-26, -6,-12, -9,-15,-23,-38, -2,-10; /M: SY='G'; M= -1, -9,-30, -9,-14,-31, 57,-16,-37,-16,-29,-17, 0,-19, -8,-16, 0,-19,-30,-20,-27,-11; /M: SY='H'; M=-19, -3,-30, -3, -1,-15,-21, 78,-24, -8,-17, 0, 4,-20, 12, 0,-10,-17,-27,-20, 26, 1; /M: SY='V'; M= -7,-24,-18,-27,-22, -4,-27,-17, 18, -9, 8, 19,-21,-25,-15, -2,-13, -5, 26,-25, -7,-20; /M: SY='S'; M= 7, -3,-14, -1, 0,-21, -3,-11,-20,-10,-30,-20, 6, 4, -1,-11, 33, 16,-13,-39,-21, -1; /M: SY='A'; M= 12,-12,-13,-15,-15,-14, -2,-21, -5,-14,-12, -8, -8,-17,-15,-16, 11, 9, 8,-29,-17,-15; /M: SY='H'; M=-19, 4,-29, 2, 0,-20,-18, 90,-29, -9,-21, -2, 15,-20, 9, 0, -8,-18,-30,-31, 16, 0; /M: SY='P'; M= -3,-13,-29, -6, 0,-26,-13,-16,-20,-10,-30,-20, -9, 53, -6,-16, 8, 1,-23,-34,-26, -6; /M: SY='D'; M=-20, 50,-30, 70, 20,-40,-10, 0,-40, 0,-30,-30, 20,-10, 0,-10, 0,-10,-30,-40,-20, 10; /M: SY='I'; M= -8,-30,-25,-38,-30, 0,-38,-30, 45,-28, 18, 18,-22,-22,-22,-28,-18, -8, 35,-22, -2,-30; /M: SY='L'; M=-10,-30,-20,-30,-20, 10,-30,-20, 20,-30, 50, 20,-30,-30,-20,-20,-30,-10, 10,-20, 0,-20; /M: SY='S'; M= 10, 0,-10, 0, 0,-20, 0,-10,-20,-10,-30,-20, 10,-10, 0,-10, 40, 20,-10,-40,-20, 0; /M: SY='L'; M=-10,-30,-20,-30,-20, 10,-30,-20, 20,-30, 50, 20,-30,-30,-20,-20,-30,-10, 10,-20, 0,-20; /M: SY='E'; M=-10, 7,-30, 14, 46,-30,-20, -3,-30, 21,-23,-17, 0, -3, 17, 8, -3,-10,-27,-27,-17, 32; /M: SY='N'; M=-10, 40,-20, 20, 0,-20, 0, 10,-20, 0,-30,-20, 60,-20, 0, 0, 10, 0,-30,-40,-20, 0; /M: SY='Q'; M=-14, -4,-30, -4, 12,-32,-20, 6,-24, 18,-20, -4, 0,-14, 40, 34, -4,-10,-26,-20,-10, 24; /M: SY='C'; M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30; /M: SY='L'; M=-10,-30,-20,-30,-20, 10,-30,-20, 20,-30, 50, 20,-30,-30,-20,-20,-30,-10, 10,-20, 0,-20; /M: SY='A'; M= 29, -6,-10,-16,-10,-16, -8,-20,-10,-10,-10,-10, -6,-10,-10,-16, 14, 21, 0,-24,-16,-10; /M: SY='T'; M= -5,-11,-15,-20,-15, -4,-21,-13, 4,-12, 8, 19,-11,-16, -7,-11, 0, 21, 5,-25, -5,-11; /M: SY='L'; M=-10,-30,-20,-30,-20, 10,-30,-20, 20,-30, 50, 20,-30,-30,-20,-20,-30,-10, 10,-20, 0,-20; /M: SY='P'; M= -5,-15,-33, -8, 0,-28,-15,-18,-20,-10,-30,-20,-13, 67, -8,-18, 2, -3,-25,-32,-28, -8; /M: SY='D'; M=-15, 39,-25, 52, 13,-33,-12, -5,-33, -2,-25,-25, 15,-10, -2,-10, 5, 4,-23,-38,-18, 5; /M: SY='L'; M= -8,-30,-18,-30,-22, 8,-30,-22, 22,-28, 41, 18,-30,-30,-22,-20,-25, -8, 19,-22, -2,-22; /M: SY='Q'; M=-10, 0,-30, 0, 15,-35,-20, 0,-25, 31,-25, -5, 0,-10, 34, 20, -5,-10,-25,-20,-10, 24; /M: SY='P'; M= -2,-10,-24, -8, -3,-22,-15,-18,-17,-10,-24,-17, -7, 38, -8,-15, 10, 15,-17,-32,-22, -8; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 12 in 3 different sequences |
| Number of true positive hits | 12 in 3 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | PS_Langendijk_Genevaux |
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 4 |
| Feature key [info] | REPEAT |
| Feature description [info] | TEP1 N-terminal |
| Version [info] | 4 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
3 sequences
TEP1_HUMAN (Q99973), TEP1_MOUSE (P97499), TEP1_RAT(O08653)
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