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PROSITE entry PS51375


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General information about the entry

Entry name [info] PPR
Accession [info] PS51375
Entry type [info] MATRIX
Date [info] 01-APR-2008 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51375
Associated ProRule [info] PRU00708

Name and characterization of the entry

Description [info] Pentatricopeptide (PPR) repeat profile.
Matrix / Profile [info] 
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=35;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=35;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.2521676; R2=0.0109613; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=753; N_SCORE=8.5; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=434; N_SCORE=5.0; MODE=1; TEXT='R?';
/DEFAULT: M0=-9; I0=-9; D=-200; I=-200; B1=-200; E1=-200; MI=-105; MD=-105; IM=-105; DM=-105;

...
 
                A   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y
/I:         B1=0; BI=-105; BD=-105;
/M: SY='D';  M=-17,-24, 64,  4,-53, -9, -8,-51, -7,-49,-41, 50,-17,-10,-14, 22, 13,-43,-63,-41;
/M: SY='P';  M=  8,-18,-13,  9,-16,-20,-12,  7, -6,  1, -2, -8, 16, -4, -5, 12, 11, 15,-41,-25;
/M: SY='V';  M= -1,-21, -8,  2, 16,-22,  6,  7, -3, -9, -4,-12,-16, -6, -3,  6,  2, 21,-12, 17;
/M: SY='T';  M= 13, -2,-24,-24,-19,-29, -9,  3,-26, -1,  7,-13,-17,-24,-32, 27, 53, 10,-50,-26;
/M: SY='Y';  M=-30, 23,-65,-54, 50,-58, 11,-16,-47, -2, -1,-45,-60,-38,-42,-33,-33,-18, 79, 86;
/M: SY='N';  M= -3, -8,  7,-10,-41, -2,  4,-27, -8,-31,-20, 65,-33,-11, -4, 23, 23,-19,-42,-33;
/M: SY='S';  M= 20,  7,-24,-18,-20,-22,-17, 11, -9, -1,  6, -8,-20,-13,-16, 26, 26, 10,-30,-22;
/M: SY='M';  M=-15,-33,-69,-53,  6,-64,-46, 30,-46, 49, 57,-58,-55,-37,-39,-39,-24, 27,-20,-19;
/M: SY='I';  M=-12,-24,-69,-55,  2,-62,-57, 52,-50, 37, 42,-59,-57,-45,-53,-29,-18, 32,-48,-25;
/M: SY='N';  M= -3,-12, 22, 10,-36, -8, 23,-37, 20,-32,-24, 26,-29, 13, 25, 21, -1,-28,-37,-13;
/M: SY='G';  M= 32, 23,-33,-22,-28, 39,-15,-13,-18,-11,  3,-15,-37,-22,-17, 16, -4, -6,-30,-20;
/M: SY='Y';  M=-25, 51,-65,-56, 42,-64,  9, -6,-48, 34, 10,-44,-62,-37,-47,-30,-31,-14,  8, 67;
/M: SY='C';  M= 22, 74,-44,-30, -7,  9,-34, -5,-26, -6, -7,-24,-42,-27,-26, 15, -2,  7,-30,-20;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='R';  M= -6,-40,  2, 15,-47,-20,  7,-38, 46,-33,-15, 11,-38, 26, 48,  4,-12,-28,-36,-31;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='N';  M= 16, 15, -6, 10,-20,-10, 13,-17,  6, -5,  1, 19,-37,  7,  1, 15,  0,-10,-35,-21;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='G';  M= -9,-30, -2, -5,-53, 68, -8,-65, 13,-55,-36, 14,-41, -6, 16, -3,-27,-56,-47,-50;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='R';  M=-20,-23, 26, 13,-17,-33,  9,-32, 27, -6, 15, 19,-35, 22, 37, -3,-20,-34,-18,-13;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='W';  M= -9,-23,-43,-32, 28,-34,  0, 14,-29, 20, 18,-33, 16,-25,-33,-15, -1, 19, 42, 19;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='D';  M= -5,-47, 45, 40,-43,-11,  5,-35, 15,-33,-26,  9,-16, 12, 11,  7, -8,-27,-38,-31;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='E';  M= -3,-41, 28, 48,-33,-14, -2,-29, 25,-16, -7, -4,-29, 14, 10,  0, -9,-26,-46,-27;
/I:         I=-61; MI=0; MD=-32; IM=0; DM=-32;
/M: SY='A';  M= 61,  0,-44,-29,-32, 15,-41,-10,-28,-19,  5,-36,-27,-29,-38, 12, -4, 12,-59,-42;
/M: SY='W';  M=-12,-11,-14, 16, 10,-43, -2,  9,  2, 20, 20,-20,-43, -4,  7,-16,-15,  7, 26,  6;
/M: SY='E';  M=  1,-26, 16, 34,-33,-14,  4,-37, 26,-28,-16,  4,-35, 27, 27, 10,-10,-26, -2,-21;
/M: SY='L';  M=-15,-10,-62,-48, 20,-61,-34, 31,-45, 40, 28,-53,-56,-36,-46,-32, -6, 36, -2, -2;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='F';  M=-30,-22,-62,-48, 62,-62, 22,  8,-35, 26, 13,-51,-58,-33,-21,-39,-30,  6, 40, 46;
/I:         I=-63; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='E';  M= -7,-14, 27, 31,-34,-10, 12,-32, 23,-26,-14, 12,-34, 18, 26,  5,-10,-24,-32,-20;
/M: SY='E';  M=-12,-34, 16, 43,-28,-25,  4,-28, 22,-16, -3, -1,-39, 27, 26,  1,-10,-23,-13, -9;
/M: SY='M';  M= -7,-21,-66,-42, -1,-57,-40, 22,-36, 30, 95,-50,-55,-24,-37,-25,-18, 11,-13,-23;
/M: SY='K';  M=-12,-21,-15, 12,-21,-28, -6,  5, 26,  7, 10,-14, -7, 13, 24, -6,-10,  7,-27,-24;
/M: SY='E';  M=  1,-28, 16, 32,-33,-13, -3,-36, 29,-32,-19,  9,-30, 19, 31, 15, -5,-26,-39,-31;
/M: SY='R';  M= -2,-13,  3, 12, -9,-18, 11,-26, 24,-11,  5, 13,-29,  9, 25, 17, -5,-25, -8,-11;
/I:         E1=-50; MI=-40; IE=-105; DE=-105;
/M: SY='G';  M=-11,-39,  7, -5,-56, 71,-11,-66,  1,-62,-51, 20,-30,-12, -2,  0,-21,-55,-56,-50;
/M: SY='C';  M=-18, 37,-47,-34, 26,-42, -2, 29,-32, 20, 14,-32,-34,-27,-27,-20,-16, 26,  4, 13;
/M: SY='K';  M= -2,-12, -5, 18,-19,-21, -5, -9, 21,-12, -9, -6, 14, 11, 17,  7,  3,  5,-39,-17;
/M: SY='P';  M=  0,-23,-29,-22,-21,-35,-30,-10,-12,  1, -3,-27, 90,-19,-18, -3,-13, -5,-42,-36;
/I:         E1=0; IE=-105; DE=-105;
» more

Post-processing [info]

COMPETES_SEQ_WITH PS50005

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 5'780 in 512 different sequences
Number of true positive hits 5'779 in 511 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 22
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.98 %
Recall (true positives / (true positives + false negatives)) 99.62 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 27
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] REPEAT
Feature description [info] PPR
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 511 sequences 

AEP3_CANGA  (Q6FKT1), AEP3_KLULA  (Q6CIF3), ATP4_MAIZE  (B4F8Z1), 

ATP4_ORYSJ  (Q10PZ4), CCM1_CANAL  (Q5A8W9), CCM1_CANAW  (C4YSG0), 
CCM1_CANDC  (B9WJ16), CCM1_CANGA  (Q6FVC6), CCM1_CANTT  (C5M5D9), 
CCM1_CLAL4  (C4Y2K4), CCM1_DEBHA  (Q6BZ28), CCM1_EREGS  (Q752U3), 
CCM1_KLULA  (Q6CNQ2), CCM1_LACTC  (C5DHU5), CCM1_PICGU  (A5DA73), 
CCM1_PICST  (A3LRH4), CCM1_SCHJY  (B6K1V7), CCM1_SCHPO  (O42955), 
CCM1_VANPO  (A7TMW6), CCM1_YARLI  (Q6CHP9), CCM1_YEAS1  (B3LI79), 
CCM1_YEAS2  (C7GQ59), CCM1_YEAS7  (A6ZUG2), CCM1_YEAS8  (C8Z944), 
CCM1_YEAST  (P48237), CCM1_ZYGRC  (C5E042), CRP1_MAIZE  (A0A1D6IEG9), 
CRP1_ORYSJ  (Q84ZD2), DEN4B_HUMAN (O75064), DEN4B_MOUSE (Q3U1Y4), 
LPPRC_HUMAN (P42704), LPPRC_MOUSE (Q6PB66), LPPRC_RAT   (Q5SGE0), 
LPPRC_XENTR (Q28C74), MYCPP_HUMAN (Q7Z401), OGR1_ORYSJ  (B8YEK4), 
OTP51_ORYSJ (Q6ZHJ5), POLB_MAIZE  (P15718), PP100_ARATH (Q9CAM8), 
PP101_ARATH (Q9C8T7), PP102_ARATH (Q9SH26), PP103_ARATH (Q9SH60), 
PP104_ARATH (Q9C7V5), PP105_ARATH (Q0WKZ3), PP106_ARATH (P0C7R3), 
PP107_ARATH (Q3ECH5), PP108_ARATH (Q9CAA8), PP109_ARATH (Q9CAA5), 
PP110_ARATH (P0C7R4), PP111_ARATH (Q9C507), PP112_ARATH (Q9C9A2), 
PP113_ARATH (Q8GZA6), PP114_ARATH (Q9C9H9), PP115_ARATH (Q9C9I3), 
PP116_ARATH (Q9C9I6), PP117_ARATH (Q9FX35), PP118_ARATH (Q9C9U0), 
PP119_ARATH (Q9CA73), PP120_ARATH (Q9CA58), PP121_ARATH (Q9CA56), 
PP122_ARATH (Q9CA54), PP123_ARATH (Q9SSF9), PP124_ARATH (Q9S7Q2), 
PP125_ARATH (Q9S7R4), PP126_ARATH (Q9SGQ6), PP127_ARATH (O49287), 
PP128_ARATH (Q3ECB8), PP129_ARATH (Q9FVX2), PP130_ARATH (Q1PFC5), 
PP131_ARATH (A3KPF8), PP132_ARATH (Q9SAK0), PP133_ARATH (Q9SAJ5), 
PP134_ARATH (Q8GW57), PP135_ARATH (Q9C977), PP136_ARATH (Q9M8M3), 
PP137_ARATH (Q9SAH2), PP138_ARATH (Q9ZU31), PP139_ARATH (Q9ZU29), 
PP140_ARATH (Q9ZVF4), PP141_ARATH (Q9ZUA2), PP142_ARATH (Q5XET4), 
PP143_ARATH (P0C894), PP144_ARATH (Q1PFA6), PP145_ARATH (Q8LK93), 
PP146_ARATH (Q9ZQ74), PP147_ARATH (Q9SI53), PP148_ARATH (Q9SJ73), 
PP149_ARATH (Q9ZUE9), PP150_ARATH (Q0WP85), PP151_ARATH (Q9SIT7), 
PP152_ARATH (Q9ZQF1), PP153_ARATH (Q9ZQE5), PP154_ARATH (Q9XIL5), 
PP155_ARATH (Q9XIM8), PP156_ARATH (Q9ZVX5), PP157_ARATH (Q8GWA9), 
PP158_ARATH (Q0WPZ6), PP159_ARATH (Q9SII7), PP160_ARATH (Q84VG6), 
PP161_ARATH (Q84J71), PP162_ARATH (Q9ZU67), PP163_ARATH (O64624), 
PP164_ARATH (Q6NKW7), PP165_ARATH (Q9SIL5), PP166_ARATH (Q9SKU6), 
PP167_ARATH (Q9SKQ4), PP168_ARATH (Q9SHZ8), PP169_ARATH (Q9SJZ3), 
PP170_ARATH (Q680H3), PP171_ARATH (O81028), PP172_ARATH (Q9ZUW3), 
PP173_ARATH (Q9ZUY1), PP174_ARATH (Q9ZUU7), PP175_ARATH (O82380), 
PP176_ARATH (Q0WNN7), PP177_ARATH (O49343), PP178_ARATH (Q9SIC9), 
PP180_ARATH (Q8S8P6), PP181_ARATH (P93005), PP182_ARATH (P93011), 
PP183_ARATH (Q8S8Q7), PP184_ARATH (O64705), PP185_ARATH (O64766), 
PP186_ARATH (O82178), PP187_ARATH (Q9SJN2), PP188_ARATH (Q9ZQA1), 
PP189_ARATH (Q9SJK9), PP190_ARATH (Q9ZUU3), PP191_ARATH (Q9ZUT5), 
PP192_ARATH (Q9ZUT4), PP193_ARATH (Q8L6Y7), PP194_ARATH (O80958), 
PP195_ARATH (O80647), PP196_ARATH (Q9S733), PP197_ARATH (Q7XJN6), 
PP198_ARATH (Q8S9M4), PP199_ARATH (Q8RWS8), PP200_ARATH (Q9SJG6), 
PP201_ARATH (Q1PEU4), PP202_ARATH (O22137), PP203_ARATH (O82363), 
PP204_ARATH (Q9ZU88), PP205_ARATH (Q9SS97), PP206_ARATH (Q9S7F4), 
PP207_ARATH (Q9FWA6), PP208_ARATH (Q9M891), PP209_ARATH (P0C896), 
PP210_ARATH (Q9SS60), PP211_ARATH (Q9M8W9), PP212_ARATH (Q9SR01), 
PP213_ARATH (Q9SR00), PP214_ARATH (Q9MA95), PP215_ARATH (Q9MA85), 
PP216_ARATH (Q9SQU6), PP217_ARATH (Q9M907), PP218_ARATH (Q9SFV9), 
PP219_ARATH (Q9SR82), PP220_ARATH (Q9SS83), PP221_ARATH (Q9SS81), 
PP222_ARATH (Q9SF38), PP223_ARATH (Q9CAY1), PP224_ARATH (Q9LTV8), 
PP225_ARATH (Q9LK58), PP226_ARATH (Q9LK57), PP227_ARATH (Q9LIC3), 
PP228_ARATH (Q9LRV9), PP229_ARATH (Q9LUL5), PP230_ARATH (Q9LUD6), 
PP231_ARATH (Q9LUC2), PP232_ARATH (P0C898), PP233_ARATH (Q9LIL5), 
PP235_ARATH (Q9LSB8), PP236_ARATH (Q9LW84), PP237_ARATH (Q9LUS3), 
PP238_ARATH (Q9LUR2), PP239_ARATH (Q9LSQ2), PP240_ARATH (Q9LSK8), 
PP241_ARATH (Q5G1S8), PP242_ARATH (Q9LHN5), PP243_ARATH (Q9LJ69), 
PP244_ARATH (Q9LT48), PP245_ARATH (Q9LVF9), PP246_ARATH (Q9LIE7), 
PP247_ARATH (Q6NQ83), PP248_ARATH (Q9LUJ4), PP249_ARATH (Q9LUJ2), 
PP250_ARATH (Q9LS88), PP251_ARATH (Q9LW63), PP252_ARATH (Q9LIQ7), 
PP253_ARATH (Q9LJR6), PP254_ARATH (Q9LSF5), PP255_ARATH (Q9LU94), 
PP256_ARATH (Q9LRV2), PP257_ARATH (Q38959), PP258_ARATH (Q9LW32), 
PP259_ARATH (Q9LJJ1), PP260_ARATH (Q9LJI9), PP261_ARATH (Q9LS72), 
PP262_ARATH (Q84J46), PP264_ARATH (Q9SNB7), PP265_ARATH (Q9STF3), 
PP267_ARATH (Q9SN85), PP268_ARATH (Q9STS9), PP269_ARATH (Q9STK5), 
PP270_ARATH (Q9M302), PP271_ARATH (P0C899), PP272_ARATH (Q5G1T1), 
PP273_ARATH (Q9M3A8), PP274_ARATH (Q9M2Y7), PP275_ARATH (P0C8A0), 
PP276_ARATH (Q9M2Y4), PP277_ARATH (Q9SCT2), PP278_ARATH (Q0WVU0), 
PP279_ARATH (Q9SCP4), PP280_ARATH (Q9LFI1), PP281_ARATH (Q9LFF1), 
PP282_ARATH (Q9SV46), PP283_ARATH (Q9LY43), PP284_ARATH (Q9LXY5), 
PP285_ARATH (Q7Y211), PP286_ARATH (Q0WN01), PP287_ARATH (Q9LYT2), 
PP288_ARATH (Q9M1D8), PP289_ARATH (Q9LEX6), PP290_ARATH (Q9LEX5), 
PP291_ARATH (Q9M2C8), PP292_ARATH (Q9M316), PP293_ARATH (Q9LZP3), 
PP294_ARATH (Q3EAF8), PP295_ARATH (Q683I9), PP296_ARATH (Q9M1V3), 
PP297_ARATH (Q9SV26), PP298_ARATH (Q8LDU5), PP299_ARATH (Q8VZE4), 
PP301_ARATH (Q9SY02), PP302_ARATH (Q9SY07), PP303_ARATH (Q9XE98), 
PP304_ARATH (Q6NQ81), PP305_ARATH (Q9SUF9), PP306_ARATH (Q9T0D6), 
PP307_ARATH (Q9SVP7), PP308_ARATH (O23266), PP309_ARATH (Q5XEY7), 
PP310_ARATH (O23278), PP311_ARATH (O23337), PP312_ARATH (Q0WSH6), 
PP313_ARATH (Q8VYH0), PP314_ARATH (Q8GWE0), PP315_ARATH (O23491), 
PP316_ARATH (Q9M4P3), PP317_ARATH (B3H672), PP318_ARATH (P0C043), 
PP319_ARATH (Q0WNP3), PP320_ARATH (Q9SN39), PP321_ARATH (O49399), 
PP323_ARATH (P0C8Q2), PP324_ARATH (O49680), PP325_ARATH (Q940A6), 
PP326_ARATH (P0C8Q3), PP327_ARATH (O49436), PP328_ARATH (Q9SVH3), 
PP329_ARATH (Q9SVH0), PP330_ARATH (A8MQA3), PP331_ARATH (O49558), 
PP332_ARATH (Q8LG95), PP333_ARATH (Q9STE1), PP334_ARATH (Q84JR3), 
PP335_ARATH (O49711), PP336_ARATH (P0C8Q5), PP337_ARATH (Q9SB36), 
PP338_ARATH (Q9SZ10), PP339_ARATH (Q9SZ20), PP340_ARATH (Q9SUD8), 
PP341_ARATH (Q9SUH6), PP342_ARATH (O65567), PP343_ARATH (O65543), 
PP344_ARATH (Q9SZ52), PP345_ARATH (Q84MA3), PP346_ARATH (Q9SUU7), 
PP347_ARATH (Q9SMZ2), PP348_ARATH (O81767), PP349_ARATH (Q0WLC6), 
PP350_ARATH (O49619), PP351_ARATH (Q8VYR5), PP352_ARATH (Q9M065), 
PP353_ARATH (O23169), PP354_ARATH (Q9SZT8), PP355_ARATH (Q9SZK1), 
PP356_ARATH (Q9SZL5), PP357_ARATH (Q9SVA5), PP358_ARATH (Q9SV96), 
PP359_ARATH (Q3E9N1), PP360_ARATH (Q9LFC5), PP361_ARATH (Q8GYL7), 
PP362_ARATH (Q9LYZ9), PP363_ARATH (Q9FFN1), PP364_ARATH (Q9LZ19), 
PP365_ARATH (Q0WMY5), PP366_ARATH (Q9FNG8), PP367_ARATH (Q9FG16), 
PP368_ARATH (P0C8Q6), PP369_ARATH (P0C8Q7), PP370_ARATH (Q9FNN9), 
PP371_ARATH (Q9FNN7), PP372_ARATH (Q94B59), PP373_ARATH (Q9FIB2), 
PP374_ARATH (Q8VYD6), PP375_ARATH (Q9LFM6), PP376_ARATH (Q9FMQ1), 
PP377_ARATH (Q9LYV3), PP378_ARATH (Q9LYU9), PP379_ARATH (Q66GP4), 
PP380_ARATH (Q9FMU2), PP381_ARATH (Q9LER0), PP382_ARATH (Q9LEQ7), 
PP383_ARATH (Q9LFQ4), PP384_ARATH (Q9LXF4), PP385_ARATH (Q9LXF2), 
PP386_ARATH (Q9LXE8), PP387_ARATH (Q8LPF1), PP388_ARATH (Q9FFE3), 
PP389_ARATH (Q9FMD3), PP390_ARATH (Q9LFL5), PP391_ARATH (Q94JX6), 
PP392_ARATH (Q3E9F0), PP393_ARATH (Q8GYM2), PP394_ARATH (P0C8Q8), 
PP395_ARATH (Q8S9D1), PP396_ARATH (Q8L6Y3), PP397_ARATH (Q8GZ63), 
PP398_ARATH (O04659), PP399_ARATH (O04647), PP400_ARATH (Q3E911), 
PP401_ARATH (Q9LKU8), PP402_ARATH (Q9FFZ2), PP403_ARATH (Q9FHR3), 
PP404_ARATH (Q9FKR3), PP405_ARATH (Q9FLZ9), PP406_ARATH (Q9FK93), 
PP407_ARATH (Q9FIX3), PP408_ARATH (Q9FLD8), PP409_ARATH (Q9FND8), 
PP410_ARATH (Q9FND7), PP411_ARATH (Q9FND6), PP412_ARATH (Q9FLL3), 
PP413_ARATH (Q8L844), PP414_ARATH (Q9FIH2), PP415_ARATH (Q9FG85), 
PP416_ARATH (P0C8R0), PP417_ARATH (Q9FFG8), PP418_ARATH (Q9FNL2), 
PP419_ARATH (Q9FHF9), PP420_ARATH (Q9LS25), PP421_ARATH (Q56XR6), 
PP422_ARATH (Q9LVS3), PP423_ARATH (Q9FGL1), PP424_ARATH (Q9FKC3), 
PP425_ARATH (Q9FI80), PP426_ARATH (Q9FGR7), PP427_ARATH (Q9FK33), 
PP428_ARATH (Q9FI49), PP429_ARATH (Q9LTF4), PP430_ARATH (Q9FLX6), 
PP431_ARATH (Q9FM64), PP432_ARATH (Q9LVQ5), PP433_ARATH (Q9FMA1), 
PP434_ARATH (Q9LVD3), PP435_ARATH (Q9FIF7), PP436_ARATH (Q9FGR2), 
PP437_ARATH (Q9FJE6), PP438_ARATH (Q9FME4), PP439_ARATH (Q9FLJ6), 
PP440_ARATH (Q9FLJ4), PP441_ARATH (Q9FLS9), PP442_ARATH (Q9FIT7), 
PP443_ARATH (Q9LVA2), PP444_ARATH (Q9FMF6), PP445_ARATH (Q9LSL9), 
PP446_ARATH (Q9LSL8), PP447_ARATH (Q9FH87), PP448_ARATH (Q9FJY9), 
PP449_ARATH (Q9FJY7), PP450_ARATH (B3H4P1), PP451_ARATH (Q9FJW6), 
PPR10_ARATH (Q9MAT2), PPR10_MAIZE (B8Y6I0), PPR11_ARATH (Q9SYK1), 
PPR12_ARATH (Q0WVK7), PPR13_ARATH (Q9MA50), PPR14_ARATH (Q9LND4), 
PPR15_ARATH (Q56X05), PPR16_ARATH (Q9LNC0), PPR17_ARATH (Q9SHK2), 
PPR18_ARATH (Q9M9X9), PPR19_ARATH (Q940Q2), PPR1_ARATH  (Q9LPC4), 
PPR1_PLAF7  (Q8IM30), PPR20_ARATH (Q9LQQ1), PPR21_ARATH (Q9LN01), 
PPR22_ARATH (Q9FRS4), PPR23_ARATH (O80488), PPR24_ARATH (Q680Z7), 
PPR25_ARATH (Q56XI1), PPR26_ARATH (O04491), PPR27_ARATH (O04504), 
PPR28_ARATH (Q3EDF8), PPR29_ARATH (Q9SY69), PPR2_ARATH  (O81908), 
PPR2_SCHPO  (O60142), PPR30_ARATH (Q9SY75), PPR31_ARATH (Q0WVV0), 
PPR32_ARATH (Q3E6Q1), PPR33_ARATH (Q9SAB4), PPR34_ARATH (Q9SAA6), 
PPR35_ARATH (Q5BIV3), PPR36_ARATH (Q0WKV3), PPR37_ARATH (Q9ASZ8), 
PPR38_ARATH (P0C7Q7), PPR39_ARATH (Q9LPX2), PPR3_ARATH  (Q8LPS6), 
PPR40_ARATH (Q9SAD9), PPR41_ARATH (Q9LMY5), PPR42_ARATH (Q9LMH5), 
PPR43_ARATH (Q9M9R6), PPR44_ARATH (Q9XI21), PPR45_ARATH (Q9M9E2), 
PPR46_ARATH (Q3EDA9), PPR47_ARATH (Q9LNP2), PPR48_ARATH (Q0WN60), 
PPR49_ARATH (Q8GYP6), PPR4_ARATH  (Q9FZ24), PPR50_ARATH (Q9LN69), 
PPR51_ARATH (Q940Z1), PPR52_ARATH (Q9FXH1), PPR53_ARATH (Q9LNU6), 
PPR54_ARATH (Q9LN22), PPR55_ARATH (Q4V389), PPR56_ARATH (P0C7Q9), 
PPR57_ARATH (Q9FRI5), PPR58_ARATH (Q9FZD1), PPR59_ARATH (Q9FZD4), 
PPR5_ARATH  (Q9FZ19), PPR5_MAIZE  (A7LN87), PPR5_ORYSJ  (A3ABE1), 
PPR5_SCHPO  (Q10451), PPR60_ARATH (Q9ZVG8), PPR61_ARATH (Q9C7F1), 
PPR62_ARATH (Q1PFQ9), PPR63_ARATH (Q9C6G2), PPR64_ARATH (Q9SA76), 
PPR65_ARATH (Q9C866), PPR66_ARATH (Q9C6R9), PPR67_ARATH (Q9C6S6), 
PPR68_ARATH (Q9C6T2), PPR69_ARATH (P0C7R0), PPR6_ARATH  (Q9SA60), 
PPR70_ARATH (Q9C501), PPR71_ARATH (Q9FX24), PPR73_ARATH (Q9LP03), 
PPR75_ARATH (Q9SX45), PPR76_ARATH (Q9ZU27), PPR77_ARATH (Q9SSR4), 
PPR78_ARATH (Q9SSR6), PPR79_ARATH (Q9MAG8), PPR7_ARATH  (Q9LR72), 
PPR80_ARATH (Q9C8L6), PPR81_ARATH (Q7X6A5), PPR82_ARATH (Q9LG23), 
PPR83_ARATH (Q9FXA9), PPR84_ARATH (Q9FXB9), PPR85_ARATH (Q0WQW5), 
PPR86_ARATH (O22714), PPR87_ARATH (Q8LE47), PPR88_ARATH (O04590), 
PPR89_ARATH (Q1PFH7), PPR8_ARATH  (Q9LR69), PPR90_ARATH (Q9SXD8), 
PPR91_ARATH (Q9SXD1), PPR92_ARATH (Q3ECK2), PPR93_ARATH (Q9SI78), 
PPR94_ARATH (Q9LQ16), PPR95_ARATH (Q9LQ15), PPR96_ARATH (Q9LQ14), 
PPR97_ARATH (Q9CAN6), PPR98_ARATH (Q9CAN5), PPR99_ARATH (Q9CAN0), 
PPR9_ARATH  (Q9LR67), PRRP1_ARATH (Q66GI4), PT309_YEAST (P32522), 
PTCD1_HUMAN (O75127), PTCD1_MOUSE (Q8C2E4), PTCD1_PONAB (Q5R655), 
PTCD1_RAT   (A2VD13), PTCD2_BOVIN (Q3SZ55), PTCD2_DANRE (Q566X6), 
PTCD2_HUMAN (Q8WV60), PTCD2_MOUSE (Q8R3K3), PTCD2_PONAB (Q5R503), 
PTCD2_XENLA (A1L2L5), PTCD3_BOVIN (Q2KI62), PTCD3_HUMAN (Q96EY7), 
PTCD3_MOUSE (Q14C51), PTCD3_PONAB (Q5R8W8), PTCD3_XENLA (Q32N55), 
PTCD3_XENTR (Q0IHP3), RF1_ORYSI   (Q76C99), RPOM_MOUSE  (Q8BKF1), 
RT27_BOVIN  (Q32PI8), RT27_HUMAN  (Q92552), RT27_MOUSE  (Q8BK72), 
THA8L_ARATH (Q9STF9)
» more

UniProtKB/Swiss-Prot
False negative sequences		 22 sequences 

AEP3_EREGS  (Q750L0), AEP3_YEAST  (Q12089), ATP18_TRYBB (P0DPG4), 

CCM1_KOMPG  (C4R5P7), DEN4C_HUMAN (Q5VZ89), DEN4C_MOUSE (A6H8H2), 
PP234_ARATH (Q9LRP6), PP263_ARATH (Q9M2A1), PP300_ARATH (Q93WC5), 
PP322_ARATH (Q2V3H0), PPR1_SCHPO  (O94368), PPR2_PLAF7  (Q8I589), 
PPR4_SCHPO  (O14275), PPR6_SCHPO  (Q9USP3), PPR72_ARATH (Q9C545), 
PPR7_SCHPO  (O42910), PPR8_SCHPO  (O94615), PRRP2_ARATH (Q680B9), 
PRRP3_ARATH (F4JKB6), PTCD3_DANRE (Q32LU7), PTCD3_DROME (A1Z9A8), 
THA8_ARATH  (Q9LVW6)
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

ATPB1_PSYIN (A1SS55)


				
	

	

		PDB
[Detailed view]		
		
			79 PDB
			


			3J9M; 3JD5; 4G23; 4G24; 4G25; 4G26; 4LEU; 4M57; 4M59; 4OE1; 5DIZ; 5FT9; 
			
				6BV5; 6BV6; 6BV8; 6BV9; 6F5D; 6LVR; 6NEQ; 6NF8; 6NU2; 6NU3; 6RW4; 6RW5; 
				6VLZ; 6VMI; 6XYW; 6ZM5; 6ZM6; 6ZS9; 6ZSA; 6ZSB; 6ZSC; 6ZSD; 6ZSE; 6ZSG; 
				7A5F; 7A5G; 7A5I; 7A5K; 7L08; 7OG4; 7P2E; 7PNT; 7PNU; 7PNV; 7PNW; 7PNX; 
				7PNY; 7PNZ; 7PO0; 7PO1; 7PO2; 7PO3; 7QI4; 7QI5; 7QI6; 8ANY; 8AP6; 8APA; 
				8APB; 8APC; 8APD; 8APE; 8APF; 8APG; 8APH; 8APJ; 8APK; 8CSP; 8CSQ; 8CSR; 
				8CSS; 8CST; 8CSU; 8D8J; 8D8K; 8OIR; 8OIS
			
			

			» more