PROSITE entry PS51667
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General information about the entry
| Entry name [info] | WRC |
| Accession [info] | PS51667 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAR-2013 CREATED;
13-FEB-2019 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51667 |
| Associated ProRule [info] | PRU01002 |
Name and characterization of the entry
| Description [info] | WRC domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=45; /DISJOINT: DEFINITION=PROTECT; N1=5; N2=41; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1995378; R2=0.0076727; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=5905.0859375; R2=1.1535693; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=1082; H_SCORE=7153; N_SCORE=10.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=561; H_SCORE=6552; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-26; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='D'; M= 13, -75, 55, 41, -71, -21, -62, -8, -5, 4, -59, -39, 19, 17, -60, -48, -17, 3, -82, -67; /M: SY='P'; M= 19, -76, -24, 21, -4, -17, -19, -61, -18, -26, 24, 11, 79, 15, -63, -17, -29, -33, -76, -66; /M: SY='E'; M= -26, -77, 47, 67, -76, 17, -20, -41, -26, -34, -2, -22, -27, -10, 2, 4, -27, -23, -82, -59; /M: SY='P'; M= -36, -77, 26, 24, -17, 30, 27, -23, -60, -31, -24, -49, 57, -23, -29, -6, -4, 13, -79, -40; /M: SY='W'; M= -32, -75, -69, -51, 8, 32, -48, -36, -11, 21, -21, 10, -36, -18, -1, 8, 4, -23, 99, -19; /M: SY='R'; M= -65, -30, -39, -37, -28, -75, -53, -72, 14, -44, 31, -27, -7, 27, 96, -60, -27, -70, -72, 4; /M: SY='C'; M= -31, 151, -80, -80, -69, -76, -79, -76, -76, -44, -67, -67, -91, -83, -82, -63, -61, -65, -97, -34; /M: SY='R'; M= -23, -13, -54, -51, -75, -47, 7, -75, 51, -58, -65, 47, -68, -6, 61, 40, -5, -55, -80, -65; /M: SY='R'; M= -65, -19, -62, -51, -22, -29, -19, -76, 49, -45, -62, -22, -73, -43, 98, -60, -63, -35, -74, -61; /M: SY='N'; M= -36, -67, -29, -57, -67, -60, -22, -46, 11, -69, -35, 73, -67, -53, -8, 36, 60, -11, 23, -4; /M: SY='D'; M= -31, -78, 104, -17, -79, -6, -52, -82, -55, -82, -78, 45, -68, -54, -63, -31, -56, -80, -91, 5; /M: SY='G'; M= -50, -19, -26, -72, -36, 96, -68, -86, -40, -83, -73, -50, -68, -65, -73, 9, -64, -81, -72, -13; /I: I=-29; MD=-75; /M: SY='K'; M= -37, -81, -61, -27, -81, -37, -24, -82, 86, -55, -69, -27, -70, -46, 48, 1, -61, -77, -79, -69; D=-29; /I: I=-29; MI=0; MD=-75; IM=0; DM=-75; /M: SY='K'; M= -42, -77, -59, -37, -79, 56, -60, -79, 63, -59, -66, -19, -67, 42, 37, -41, -11, -57, -74, -68; /M: SY='W'; M= -75,-101,-102, -79, -41, -74,-102, -74, -70, -71, -74, -95, -79, -71, -34, -82, -88, -88, 178, -27; /M: SY='R'; M= -66, -82, -61, -51, -36, -74, 82, -67, -20, -46, -60, -38, -18, 23, 95, -35, -50, -63, -78, -26; /M: SY='C'; M= -61, 153, -81, -81, -69, -77, -80, -78, -77, -69, -69, -67, -92, -84, -83, -64, -61, -66, -98, -25; /M: SY='S'; M= -37, -10, -58, -51, -54, -55, 7, -74, 50, -74, -18, -11, 37, 21, 21, 60, 5, -70, 6, -64; /M: SY='R'; M= -15, -76, -16, 8, -45, -21, -8, -74, 29, -30, -1, 41, -69, 40, 67, -11, -30, -71, -78, -63; /M: SY='M'; M= -16, -77, 25, 25, -25, -28, -58, 6, -2, -26, 39, 2, 25, 22, 39, -41, 7, -60, -8, -40; /M: SY='A'; M= 55, -65, -67, -63, -66, -49, -70, -40, -15, -30, -54, -10, -69, -25, -11, 1, 33, 54, -81, -66; /M: SY='M'; M= -24, -25, 18, -13, -6, -52, -20, 0, 14, 26, 52, -29, -45, -1, -14, 12, -56, 23, -76, -29; /M: SY='P'; M= -10, -24, -25, 36, -77, 12, 12, -49, -23, -57, -64, -24, 77, 22, -15, -21, -40, 14, -80, -71; /I: I=-45; MI=0; MD=-115; IM=0; DM=-115; /M: SY='G'; M= -5, -49, 38, -47, -63, 75, -36, -81, -64, -66, -72, 11, 54, -63, -72, -51, -21, -78, -79, -68; /M: SY='H'; M= -41, -76, -10, -18, -8, -48, 59, -68, 43, -38, -59, 43, -70, 49, -32, -9, -18, -31, -65, 58; /M: SY='S'; M= 7, -68, -59, -54, -71, -38, -62, -48, 52, -16, -61, -23, -9, -20, -23, 63, 36, -33, -79, -66; /M: SY='Y'; M= -42, -73, -78, -73, 40, -80, 11, -41, -70, 56, 37, -74, -81, -21, -45, -37, -63, -4, 10, 72; /M: SY='C'; M= -44, 151, -80, -80, -70, -55, -79, -77, -75, -68, -15, -67, -90, -82, -56, -64, -61, -65, -23, -38; /M: SY='E'; M= -13, -28, 44, 88, -80, -36, -56, -77, -2, -41, -69, -40, -44, 0, -16, -30, -37, -37, -82, -71; /M: SY='H'; M= -19, -3, -19, -55, -53, -64, 88, -29, 34, -58, -39, -54, -47, 1, 46, -50, -28, -69, -63, 73; /M: SY='H'; M= -39, -80, -53, -54, -68, -70, 146, -84, -58, -61, -54, -18, -31, -48, -48, -41, -66, -84,-101, -35; /M: SY='M'; M= -9, -26, -73, -67, 27, -75, 36, 13, -46, 42, 62, -43, -47, 15, -29, -6, -39, -38, -65, 34; /M: SY='H'; M= 20, -73, 44, -26, -21, -1, 71, -29, -18, -1, -19, -4, -12, -37, 0, 4, -38, -8, -82, -58; /M: SY='Q'; M= -35, 14, -64, -51, -63, -45, -19, -67, 48, -7, 22, -57, -71, 59, 55, -15, -61, -49, 48, 28; /M: SY='G'; M= 15, -71, -62, -45, -49, 50, -64, -7, 25, -28, -62, -9, -29, 9, -53, 41, -19, -12, -75, -31; /M: SY='R'; M= -19, -54, -60, -7, -9, -56, 17, -49, 33, -11, -45, 14, -72, -15, 78, -8, -28, -30, -75, -22; /I: I=-33; MI=0; MD=-84; IM=0; DM=-84; /M: SY='H'; M= -8, -72, -58, -54, -71, -30, 55, -50, 38, -25, 13, 21, -8, -14, 40, 50, -36, -45, -80, -48; /M: SY='R'; M= -25, -7, -11, -36, -67, -39, -12, -76, 49, -73, -64, -1, 19, -26, 74, -8, -25, -60, -70, 36; /M: SY='S'; M= 8, -69, -46, -56, -40, -30, -43, -66, 11, -9, -15, 15, -3, 14, -1, 68, 12, -63, -75, 3; /I: I=-42; MI=0; MD=-106; IM=0; DM=-106; /M: SY='N'; M= 27, -70, -28, -48, -62, -5, -19, -55, 11, -53, 19, 45, 15, -39, 35, 27, -6, -6, -79, -38; /M: SY='K'; M= -32, -75, -40, -24, -74, -58, -59, -49, 57, -45, -64, 14, 54, -8, 26, 36, 6, -25, -78, -38; /M: SY='K'; M= -1, -14, -34, -40, -68, -24, 6, -63, 40, -7, -24, 18, 33, -29, 15, 36, -10, -9, -76, -3; /M: SY='P'; M= 19, -72, -27, -7, -3, -25, -35, -44, 25, -29, -44, 6, 51, -21, -33, 7, -33, 38, -76, -26; /M: SY='E'; M= 9, -74, 20, 48, -58, -50, 3, -48, 32, -40, -38, -27, 3, 16, 13, -6, 7, -2, -79, -44; /M: SY='S'; M= 12, -71, -24, -5, -5, 16, -32, -58, -18, -42, -49, 11, 30, -16, 11, 49, 8, -8, -78, -65; /I: E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 27 in 26 different sequences |
| Number of true positive hits | 27 in 26 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | WRC |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
26 sequences
GRF10_MAIZE (A5HEG9), GRF10_ORYSJ (Q6EPP9), GRF11_ORYSJ (Q6AWX8), GRF12_ORYSJ (Q6AWX7), GRF1_ARATH (O81001), GRF1_MAIZE (A0A060D764), GRF1_ORYSI (A2XA73), GRF1_ORYSJ (Q6AWY8), GRF2_ARATH (Q8L8A8), GRF2_ORYSJ (Q6AWY7), GRF3_ARATH (Q9SJR5), GRF3_ORYSJ (Q6AWY6), GRF4_ARATH (Q8L8A7), GRF4_ORYSJ (Q6ZIK5), GRF5_ARATH (Q8L8A6), GRF5_ORYSJ (Q6AWY4), GRF6_ARATH (Q9ZQ12), GRF6_ORYSJ (Q6AWY3), GRF7_ARATH (Q9FJB8), GRF7_ORYSJ (Q6AWY2), GRF8_ARATH (Q9SU44), GRF8_ORYSJ (Q6AWY1), GRF9_ARATH (Q8S9M3), GRF9_ORYSJ (Q9FRG8), JMJ24_ARATH (F4HZD1), JMJ28_ARATH (Q8H1S7)» more
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