PROSITE entry PS51674
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General information about the entry
| Entry name [info] | 4FE4S_WBL |
| Accession [info] | PS51674 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAY-2013 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51674 |
| Associated ProRule [info] | PRU01010 |
Name and characterization of the entry
| Description [info] | 4Fe-4S WhiB-like (Wbl)-type iron-sulfur binding domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=62; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=57; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3765483; R2=0.0082260; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=8140.4462891; R2=2.2116711; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=1049; H_SCORE=10460; N_SCORE=11.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=502; H_SCORE=9251; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-28; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='A'; M= 61, -77, -75, -43, -76, -26, -21, -41, -30, 8, -64, -37, 43, -55, 24, -5, -12, 1, -85, -75; /M: SY='C'; M= -56, 155, -89, -89, -79, -84, -89, -86, -85, -77, -77, -75,-100, -92, -91, -72, -69, -74,-109, -90; /M: SY='R'; M= 42, -17, -48, -54, -58, -23, 16, -15, -25, -27, -36, -49, -33, -4, 67, -7, -2, 4, -84, -17; /I: I=-23; MI=0; MD=-58; IM=0; DM=-58; /M: SY='G'; M= -23, -95, 23, 2, -37, 33, -5, -67, -39, -54, -85, -42, -29, 28, -52, 8, -7, -48, -96, -18; D=-23; /I: I=-23; DM=-58; /M: SY='G'; M= 24, -80, 16, 5, -39, 30, -18, -36, -54, -32, 25, -42, -30, 2, 4, -19, 25, 10, 26, -10; /M: SY='D'; M= -25, -85, 92, -1, -38, -29, -14, -52, -30, -47, -79, 30, -10, -4, -5, -15, -2, -81, -96, -38; /M: SY='P'; M= -1, -89, -6, -22, -39, -28, 8, -77, -59, -73, -40, -71, 103, -27, -31, -4, 12, -29, 17, -54; /M: SY='D'; M= -10, -86, 77, 69, -63, -22, -43, -75, -28, -43, -79, -20, -12, -13, -33, -22, -30, -70, -92, -31; /M: SY='L'; M= 11, -37, -35, -35, -22, -71, -37, 15, -42, 60, 29, -79, -1, -24, -13, -52, -13, -11, 20, -48; /M: SY='W'; M= -52, -87, -52, -51, 99, -86, -81, -55, -82, -44, -21, -88, -62, -86, -82, -82, -54, -62, 131, 19; /M: SY='F'; M= -28, -48, 38, -55, 94, -48, 10, -48, -76, -20, -32, -70, -66, -32, -62, -50, 7, -49, 26, 35; /I: I=-16; MI=0; MD=-41; IM=0; DM=-41; /M: SY='P'; M= -29, -62, -5, -5, -66, 7, -40, -84, -68, -81, -39, -29, 27, -90, -20, -33, -22, -26, -28, -30; D=-16; /I: I=-16; DM=-41; /M: SY='E'; M= -45,-109, 20, 51, -65, -30, -26,-104, -33, -39, -26, -84, -15, -23, -24, -43, -44,-101, -24, -97; D=-16; /I: I=-16; DM=-41; /M: SY='P'; M= -24,-100, 20, -19,-102, -10, -29, -74, -39, -70, -92, -16, 31, -32, 18, -5, 17, -58,-108, -94; D=-16; /I: I=-16; DM=-41; /M: SY='R'; M= 6, -48, -14, 5, -46, 17, 1, -63, -28, -56, -86, -23, 16, -31, 19, -23, -17, -36, -27, -88; D=-16; /I: I=-16; DM=-41; /M: SY='P'; M= 10, -88, 11, 11, -72, 5, -25, -71, -36, -80, -34, -8, 53, -7, 23, 15, -6, -45, -91, -26; D=-16; /I: I=-16; DM=-41; /M: SY='E'; M= 17, -86, 22, 29, -49, -6, -20, -38, -40, -21, -73, -30, 23, 18, 8, 3, -8, -15, 2, -35; D=-16; /I: I=-16; DM=-41; /M: SY='R'; M= 7, -84, 29, 1, -79, -5, -4, -39, -10, -52, -52, 1, 14, -2, 57, 3, -3, -32, 19, -4; D=-16; /I: I=-16; DM=-41; /M: SY='R'; M= 10, -82, -3, -5, -47, 4, 17, -32, -5, -24, -31, -55, 20, 3, 49, 29, 8, -31, -85, -30; /M: SY='R'; M= 23, -81, 7, 22, -60, -18, 2, -28, 7, -26, -50, -16, -62, 17, 40, 2, 7, -8, 14, -6; /M: SY='R'; M= -2, -51, 14, 9, -40, -43, -3, -39, -5, -11, -22, -51, -10, 34, 69, 6, -12, -35, -85, -51; /I: I=-38; MI=0; MD=-97; IM=0; DM=-97; /M: SY='E'; M= 17, -41, -12, 38, -35, -51, 25, 12, -34, -10, -63, -6, -20, 14, 28, -36, 11, 4, -23, -10; /M: SY='R'; M= 38, -81, 28, 35, -83, -36, -6, -37, -1, -44, -71, -51, -19, 7, 49, -9, 7, -43, -87, -47; /M: SY='R'; M= 33, -81, -38, 37, -48, -75, 20, -57, 14, -15, -34, -41, -19, 32, 40, -43, 21, -21, -22, -34; /M: SY='A'; M= 95, -8, -77, -69, -81, -37, -77, -40, -71, -40, -10, -71, -49, -58, -64, -51, -61, -34, -84, -78; /M: SY='K'; M= 15, -38, -71, -43, -78, -79, -68, -11, 67, -16, 7, -64, -77, 13, 64, -65, -25, -10, -83, -71; /M: SY='R'; M= 49, -80, 7, 16, -83, -50, -17, -33, 14, -39, -36, -38, -75, 29, 52, -4, 2, -63, -86, -74; /M: SY='I'; M= -10, -78, -87, -64, -9, -61, -46, 57, -55, 36, 1, -81, -84, -35, -46, -46, -11, 51, -14, -30; /M: SY='C'; M= -69, 155, -89, -89, -79, -85, -89, -86, -85, -77, -77, -75,-100, -93, -91, -72, -69, -74,-109, -90; /I: I=-45; MI=0; MD=-115; IM=0; DM=-115; /M: SY='A'; M= 45, -80, 11, -8, -64, 6, 29, -60, -47, -14, 7, -15, -77, 22, 38, 3, -11, -45, 11, -39; /M: SY='R'; M= 14, -81, 10, -12, -83, 33, 3, -67, -25, -44, -7, -12, -49, 22, 47, 20, 22, -42, -44, -74; /M: SY='C'; M= -69, 155, -89, -89, -79, -85, -89, -86, -85, -77, -77, -75,-100, -93, -91, -72, -69, -74,-109, -90; /M: SY='P'; M= -32, -95, -51, -23, -60, -61, -35, -81, -69, -89, -60, -43, 122, -48, -55, -25, -39, -63, -87, -87; /M: SY='V'; M= -16, -75, -89, -83, -15, -75, -30, 11, -79, 6, -19, -84, -86, -81, -23, -64, -47, 90, -90, -55; /M: SY='R'; M= -11, -84, -77, -66, -35, -84, -68, 13, 5, 20, 6, -70, -82, 18, 83, -41, -40, -8, 7, -66; /M: SY='R'; M= 36, -49, 31, 23, -51, -12, -23, -53, -22, -13, -14, -64, -38, 21, 39, -37, 8, -6, -20, -37; /M: SY='Q'; M= 30, -84, 26, 60, -85, -52, -30, -66, -19, -23, -34, -63, 12, 60, -1, -29, -26, -57, -6, -75; /I: I=-42; MI=0; MD=-106; IM=0; DM=-106; /M: SY='C'; M= -69, 155, -89, -89, -79, -85, -89, -86, -85, -77, -77, -75,-100, -93, -91, -72, -69, -74,-109, -90; /M: SY='L'; M= 37, -79, -48, -13, -54, -32, -29, -29, -42, 56, -53, -35, -82, -14, 50, -55, -36, -59, -82, -68; /M: SY='Q'; M= 37, -80, 28, 41, -45, -38, -46, -59, -16, -63, -72, -16, -73, 43, 25, -3, 26, -39, -86, -27; /M: SY='W'; M= -6, -86, 29, -1, 23, -41, 54, -71, -51, -9, -65, -16, -81, -7, -6, -20, -39, -33, 92, 64; /M: SY='A'; M= 89, -72, -48, -38, -41, 5, -77, -56, -70, -51, -68, -69, -75, -28, -44, -22, -35, -19, -83, -77; /M: SY='L'; M= 0, -20, -5, -12, -42, -30, -75, 14, -50, 58, 26, -45, -83, -20, -15, -28, -48, 22, -84, -66; /M: SY='E'; M= 20, -81, 35, 41, -64, -34, -16, -40, -8, -30, -42, -14, -27, 4, 29, -9, 21, 4, -39, -57; /M: SY='N'; M= -20, -37, -3, 15, -14, -41, 35, -51, -41, -1, 9, 46, -56, 7, 20, 0, 30, -7, 32, -27; /M: SY='R'; M= 1, -34, 24, 31, -64, 28, 29, -85, -27, -55, -75, 25, 38, -3, 42, -41, -35, -72, -87, -29; /M: SY='E'; M= -3, -84, 42, 70, -48, -27, 9, -53, -49, -23, -25, -21, -15, 7, 10, -13, -34, -14, -1, -55; /I: I=-24; MD=-60; /M: SY='P'; M= -6, -20, -10, 23, -79, -19, 18, -34, -21, -27, -24, -19, 54, 20, 28, -3, 13, -17, 26, -34; D=-24; /I: I=-24; MD=-60; /M: SY='H'; M= -6, -20, -7, -19, 25, 2, 75, -57, -58, -32, -70, -24, -34, -40, -41, -14, 0, -23, 39, 45; D=-24; /I: I=-24; MI=0; MD=-60; IM=0; DM=-60; /M: SY='G'; M= -24, -45, -73, -83, -62, 100, -35, -92, -77, -78, -9, -46, -76, -74, -84, -42, -53, -62, -82, -83; /M: SY='V'; M= -65, -78, -90, -85, -10, -92, -88, 57, -81, -28, 30, -83, -84, -82, -54, -75, -8, 81, -10, -22; /M: SY='W'; M= -40, -97, -98, -83, 1, -63, -91, -31, -73, -43, -72, -92, -86, -76, 15, -82, -43, 1, 162, 25; /M: SY='G'; M= 57, -78, -73, -77, -88, 85, -78, -87, -74, -86, -77, -62, -75, -71, -56, -21, -69, -60, -83, -83; /M: SY='G'; M= 2, -83, -72, -62, -90, 100, -78, -95, -76, -92, -82, -59, -76, -74, -84, -42, -53, -88, -82, -85; /M: SY='M'; M= -57, -78, -59, -16, -39, -70, 3, -1, -5, 34, 57, -44, -80, -10, 23, -40, 41, 24, -42, -18; /M: SY='T'; M= -19, -36, 26, -41, -49, -38, -43, -37, -35, -25, -67, 6, -7, -32, -14, 25, 74, 1, 0, 6; /M: SY='P'; M= 16, -19, -25, 46, -4, -38, -1, -33, -54, 14, -23, -55, 53, -31, 10, -31, -28, -15, -80, 7; /M: SY='R'; M= 13, -83, 28, 24, -83, -3, -18, -79, -2, -54, -23, 4, 38, -10, 42, -5, 9, -36, -10, -32; /M: SY='E'; M= -13, -86, 39, 68, -87, -3, -6, -61, -38, -47, -75, -32, 19, 48, -3, -23, -3, -48, -88, -54; /M: SY='R'; M= -29, -87, -26, -50, -82, 1, -38, -70, -5, -30, -70, -19, 18, -18, 96, -19, -28, -40, -85, -73; /M: SY='R'; M= 4, -84, -33, -5, -47, 2, 17, -30, 10, -39, -26, -14, -8, 4, 74, 0, -12, -68, -4, -16; /M: SY='R'; M= 20, -82, -10, 1, -66, -15, 27, -29, -11, -24, -68, 3, 26, 9, 54, -6, -8, -9, -85, -20; /I: E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 25 in 25 different sequences |
| Number of true positive hits | 25 in 25 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | 4Fe-4S Wbl-type |
| Version [info] | 4 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
25 sequences
WHB2A_MYCTU (O53353), WHB2B_MYCTO (Q7D5T7), WHB5A_MYCTU (P71592), WHB5B_MYCTO (P0DKR7), WHB7A_MYCTU (Q6MX01), WHB7B_MYCTO (Q8VJ53), WHIB1_BIFLO (Q8G5J9), WHIB1_MYCTO (P9WF42), WHIB1_MYCTU (P9WF43), WHIB2_BIFLO (Q8G5K1), WHIB2_MYCS2 (A0QTG3), WHIB2_MYCSM (Q9S426), WHIB3_MYCBO (Q7TWJ2), WHIB3_MYCS2 (A0QST8), WHIB3_MYCTO (P9WF40), WHIB3_MYCTU (P9WF41), WHIB4_MYCMM (B2HK79), WHIB4_MYCTO (P9WF38), WHIB4_MYCTU (P9WF39), WHIB6_MYCTO (P9WF36), WHIB6_MYCTU (P9WF37), WHIB7_MYCS2 (A0QTT1), WHIB_BPMT4 (Q9ZX29), WHIB_STRCO (Q7AKN0), WHID_STRCO (Q7AKI9)» more
|
| PDB [Detailed view] |
12 PDB
5OAY; 6ONO; 6ONU; 7F7N; 7KIF; 7KIM; 7KUF; 7KUG; 8CWR; 8CWT; 8CYF; 8D5V |