PROSITE logo
Due to maintenance work, this service will be unavailable from Mon Nov 11 17:30 until Tue Nov 12 09:00 CET. Apologies for the inconvenience.

ProRule PRU00540


General rule information [?]

Accession PRU00540
Dates 11-APR-2006 (Created)
19-NOV-2022 (Last updated, Version 15)
Data class Domain;
Predictors PROSITE; PS51197; HTH_RRF2_2
Name Rrf2-type HTH domain
Function The rrf2-type HTH domain is a putative DNA-binding, winged helix-turn-helix (wHTH) domain of about 130 residues present in transcription regulators of the rrf2 family, involved in nitrite or iron metabolism. The C-terminal part of the domain contains 3 conserved cysteine residues that may bind an Fe-S cluster.
Scope(s) Bacteria
Example(s) P0AGK8 (ISCR_ECOLI);

Propagated annotation [?]

Keywords [?]

DNA-binding
case <FTGroup:1>
Metal-binding
end case
Transcription
Transcription regulation

Gene Ontology [?]

GO:0003677; Molecular function:DNA binding
case <FTGroup:1>
GO:0046872; Molecular function:metal ion binding
end case
GO:0006355; Biological process:regulation of DNA-templated transcription
GO:0006351; Biological process:DNA-templated transcription

Cross-references [?]

PROSITE PS01332; HTH_RRF2_1; 1;

Features [?]

From: PS51197
Key From To Description Tag Condition FTGroup
DOMAIN from to /note="HTH rrf2-type #"
DNA_BIND 26 49 /note="H-T-H motif"
BINDING 90 90 /ligand="[2Fe-2S] cluster"
/ligand_id="ChEBI:CHEBI:190135"		 C 1
BINDING 96 96 /ligand="[2Fe-2S] cluster"
/ligand_id="ChEBI:CHEBI:190135"		 C 1
BINDING 102 102 /ligand="[2Fe-2S] cluster"
/ligand_id="ChEBI:CHEBI:190135"		 C 1

Additional information [?]

Size range 120-150 amino acids
Related rules PRU00393
PRU00307
Fusion None
Repeats 1
Topology Undefined

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.



View rule in raw text format (no links)

UniProtKB rule member sequences [?]