annotation rule: PRU00593

General rule information [?]

Accession PRU00593
Dates 17-OCT-2006 (Created)
16-DEC-2016 (Last updated, Version 5)
Data class Domain
Predictors PROSITE; PS01124; HTH_ARAC_FAMILY_2
Name araC/xylS-type HTH domain
Function The araC/xylS-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 100 amino acids, present in bacterial transcription regulators of genes involved in resistance to antibiotics, organic solvents and heavy metals.

Propagated annotation [?]


Cross-references [?]

PROSITE PS00041; HTH_ARAC_FAMILY_1; 1;

Gene Ontology [?]

GO:0003677; Molecular function: DNA binding.
GO:0006355; Biological process: regulation of transcription, DNA-templated.
GO:0006351; Biological process: transcription, DNA-templated.

Keywords [?]

DNA-binding
Transcription
Transcription regulation

Features [?]

From: PS01124
Key     From     To       Description   Tag   Condition   FTGroup
DOMAIN     from     to       HTH araC/xylS-type #        
DNA_BIND     18     39       H-T-H motif        
DNA_BIND     66     89       H-T-H motif        

Additional information [?]

Size range 80-120 amino acids
Related rules None
Repeats 1
Topology Undefined
Example P0ACH5 (MARA_ECOLI)
Scope Eukaryota
Bacteria

Copyright

PROSITE is copyright. It is produced by the SIB Swiss Institute Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified. Usage by and for commercial entities requires a license agreement. For information about the licensing scheme send an email to license@isb-sib.ch or see: prosite_license.html.


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UniProtKB rule member sequences [?]