ProRule PRU01422
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU01422
General rule information
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| Accession | PRU01422 |
| Dates | -- (Created)
-- (Last updated, Version ) |
| Data class | Domain; |
| Predictors |
PROSITE; PS52077; IFN_III |
Name | Interferon (IFN) type-III family |
| Function | Type III IFNs, commonly known as interferon lambda (IFNL or IFN- lambda), have been reported in mammals, birds, reptiles, amphibians, and cartilaginous fish. IFN-IIIs include IFN-lambda1-3 (also known as interleukin [IL]-29, IL-28A, and IL-28B) and IFN-lambda4 (only IFN-lambda2 and IFN- lambda3 exist in mice). They play a crucial role as gatekeepers, particularly in safeguarding mucosal epithelial cells. |
| Scope(s) |
Eukaryota Euteleostomi |
| Example(s) | Q8IU54; |
Propagated annotation
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Comments
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| SUBCELLULAR LOCATION | Secreted. |
| SIMILARITY | Belongs to the type-III (or lambda) interferon family. |
Keywords
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| Antiviral defense | |
| Cytokine | |
| Secreted | |
| case <FTGroup:1> or <FTGroup:2> or <FTGroup:3> | |
| Disulfide bond | |
| end case | |
| case (<Feature:PS52077:3-102=C-x*-C> and <Feature:PS52077:35-135=C-x*-C> and<Feature:PS52077:48-161=C-x*-C>) | |
| else case (<Feature:PS52077:3-102=C-x*-C> and <Feature:PS52077:37-135=C-x*-C> and<Feature:PS52077:154-161=C-x*-C>) | |
Gene Ontology
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| GO:0005125; Molecular function:cytokine activity |
| GO:0050778; Biological process:positive regulation of immune response |
| GO:0051607; Biological process:defense response to virus |
| GO:0005615; Cellular component:extracellular space |
| GO:0045087; Biological process:innate immune response |
| GO:0005102; Molecular function:signaling receptor binding |
Cross-references
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| PROSITE | PS00001; ASN_GLYCOSYLATION; 0-1; |
Features
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| From: PS52077 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| case (<Feature:PS52077:3-102=C-x*-C> and <Feature:PS52077:35-135=C-x*-C> and<Feature:PS52077:48-161=C-x*-C>) | ||||||||||||
| DISULFID | 3 | 102 | 1 | |||||||||
| DISULFID | 35 | 135 | 1 | |||||||||
| DISULFID | 48 | 161 | 1 | |||||||||
| else case (<Feature:PS52077:3-102=C-x*-C> and <Feature:PS52077:37-135=C-x*-C> and<Feature:PS52077:154-161=C-x*-C>) | ||||||||||||
| DISULFID | 3 | 102 | 2 | |||||||||
| DISULFID | 37 | 135 | 2 | |||||||||
| DISULFID | 154 | 161 | 2 | |||||||||
| else case (<Feature:PS52077:37-135=C-x*-C>) | ||||||||||||
| DISULFID | 37 | 135 | C-x*-C | 3 | ||||||||
| end case | ||||||||||||
Additional information
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| Size range | 155-162 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Eukaryota [7] All [ 7 ]
- Retrieve set of proteins with 3D structure for this domain