PROSITE documentation PDOC00419

Adenosine and AMP deaminase signature

Description

Adenosine deaminase (EC 3.5.4.4) catalyzes the hydrolytic deamination of adenosine into inosine. AMP deaminase (EC 3.5.4.6) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [1] that these two types of enzymes share three regions of sequence similarities; these regions are centered on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes. We have selected one of these regions, it contains two conserved aspartic acid residues that are potential active site residues.

Last update:

May 2004 / Text revised.

Technical section

PROSITE method (with tools and information) covered by this documentation:

A_DEAMINASE, PS00485Adenosine and AMP deaminase signature  (PATTERN)
Consensus pattern: [SA]-[LIVM]-[NGS]-[STA]-D-D-P
The 2 D's may be active site residues
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: 3
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00485
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00485
Scan Swiss-Prot/TrEMBL entries against PS00485
view ligand binding statistics
Matching PDB structures: 1A4L 1A4M 1ADD 1KRM ... [ALL]

Reference

1 Authors Chang Z.Y., Nygaard P., Chinault A.C., Kellems R.E.
Title Deduced amino acid sequence of Escherichia coli adenosine deaminase reveals evolutionarily conserved amino acid residues: implications for catalytic function.
Source Biochemistry 30:2273-2280(1991).
PubMed ID 1998686

Copyright

PROSITE is copyright. It is produced by the SIB Swiss Institute Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified. Usage by and for commercial entities requires a license agreement. For information about the licensing scheme send an email to
Prosite License or see: prosite_license.html.

Miscellaneous

View entry in original PROSITE document format
View entry in raw text format (no links)