PROSITE documentation PDOC00720

Glyoxalase I signatures

Description:

Glyoxalase I (EC 4.4.1.5) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway, the transformation of methylglyoxal and glutathione into S-lactoylglutathione which is then converted by glyoxalase II to lactic acid [1]. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric.

The sequence of glyoxalase I is well conserved. In bacteria and mammals, the enzyme is a protein of about 130 to 180 residues while in fungi it is about twice longer. In these organisms the enzyme is built out of the tandem repeat of an homologous domain.

We have derived two signature patterns for this family. The first one is located in the N-terminal region while the second one is located in the central section of the protein and contains a conserved histidine that could be implicated in the binding of the zinc atom.

Last update:

December 2004 / Pattern and text revised.

Technical section:

PROSITE methods (with tools and information) covered by this documentation:

GLYOXALASE_I_1, PS00934Glyoxalase I signature 1  (PATTERN)
Consensus pattern: [HQ]-[IVT]-x-[LIVFY]-x-[IV]-x(4)-{E}-[STA]-x(2)-F-[YM]-x(2,3)-[LMF]-G-[LMF]
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: 2.
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00934
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00934
Scan Swiss-Prot/TrEMBL entries against PS00934
view ligand binding statistics
Matching PDB structures: 1F9Z 1FA5 1FA6 1FA7 ... [ALL]
GLYOXALASE_I_2, PS00935Glyoxalase I signature 2  (PATTERN)
Consensus pattern: G-[NTKQ]-x(0,5)-[GA]-[LVFY]-[GH]-H-[IVF]-[CGA]-x-[STAGLE]-x(2)-[DNC]
Sequences known to belong to this class detected by the pattern: ALL, except B.subtilis ywbC
Other sequence(s) detected in Swiss-Prot: NONE.
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00935
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00935
Scan Swiss-Prot/TrEMBL entries against PS00935
view ligand binding statistics
Matching PDB structures: 1BH5 1F9Z 1FA5 1FA6 ... [ALL]

Reference:

1 AuthorsKim N.-S., Umezawa Y., Ohmura S., Kato S.
TitleHuman glyoxalase I. cDNA cloning, expression, and sequence similarity to glyoxalase I from Pseudomonas putida.
SourceJ. Biol. Chem. 268:11217-11221(1993).
PubMed ID7684374

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