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Entry: PS00935
General information about the entry
Entry nameGLYOXALASE_I_2
Accession numberPS00935
Entry typePATTERN
DateJUN-1994 (CREATED); JUL-1999 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00720
Name and characterization of the entry
DescriptionGlyoxalase I signature 2.
PatternG-[NTKQ]-x(0,5)-[GA]-[LVFY]-[GH]-H-[IVF]-[CGA]-x-[STAGLE]-x(2)-[DNC].
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 29 hits in 27 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 28 hits in 26 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 1 hits in 1 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 96.55 %
  • Recall (true hits / (true hits + false negatives)): 84.85 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
LGUL_ARATH  (Q8H0V3), LGUL_BRAJU  (O04885), LGUL_BRAOG  (Q39366), 
LGUL_CICAR  (O49818), LGUL_ECO57  (P0AC82), LGUL_ECOLI  (P0AC81), 
LGUL_HAEIN  (P44638), LGUL_HUMAN  (Q04760), LGUL_MACFA  (Q4R5F2), 
LGUL_MOUSE  (Q9CPU0), LGUL_NEIMA  (P0A0T2), LGUL_NEIMB  (P0A0T3), 
LGUL_PSEAE  (Q9HU72), LGUL_PSEPU  (P16635), LGUL_RAT    (Q6P7Q4), 
LGUL_SALTI  (P0A1Q3), LGUL_SALTY  (P0A1Q2), LGUL_SCHPO  (Q09751), 
LGUL_SHIFL  (P0AC83), LGUL_SOLLC  (Q42891), LGUL_SOYBN  (Q9ZS21), 
LGUL_SYNY3  (Q55595), LGUL_VIBCH  (Q9KT93), LGUL_VIBPA  (P46235), 
LGUL_YEAST  (P50107), YQJC_BACSU  (P54540)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
LGUC_ARATH  (Q8W593), LGUL_ORYSJ  (Q948T6), YRAH_BACSU  (O07918), 
YURT_BACSU  (O32161), YWBC_BACSU  (P39586)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
LGUL_PINST  (P84719)
False positive hits (sequences which do not belong to the set under consideration):
NKD1_HUMAN  (Q969G9)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		1BH5; 1F9Z; 1FA5; 1FA6; 1FA7; 1FA8; 1FRO; 1QIN; 1QIP; 2ZA0;

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