Entry: PS00051

General information about the entry

Entry name [info] RIBOSOMAL_L39E
Accession [info] PS00051
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00050

Name and characterization of the entry

Description [info] Ribosomal protein L39e signature.
Pattern [info]
[KRM]-[PTKS]-x(3)-[LIVMFG]-x(2)-[NHS]-x(3)-R-[DNHY]-W-R-[RS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 74 in 74 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.67 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
74 sequences

RL391_ARATH (P51424    ), RL391_ORYSJ (Q6KAJ8    ), RL392_ARATH (Q8L8W6    ), 
RL392_ORYSJ (P51426    ), RL393_ORYSJ (Q5SMI4    ), RL39L_HUMAN (Q96EH5    ), 
RL39_AERPE  (P59472    ), RL39_ARCFU  (O28212    ), RL39_ASHGO  (Q758D8    ), 
RL39_BOVIN  (Q3T051    ), RL39_CAEEL  (P52814    ), RL39_CALMQ  (A8MAL5    ), 
RL39_CANAX  (Q96W55    ), RL39_CHICK  (Q98TF5    ), RL39_DEBHA  (Q6BHV8    ), 
RL39_DROME  (O16130    ), RL39_ENCCU  (Q8SQP8    ), RL39_HALLT  (B9LUV0    ), 
RL39_HALMA  (P22452    ), RL39_HALS3  (B0R7X9    ), RL39_HALSA  (Q9HMM9    ), 
RL39_HALWD  (Q18EU6    ), RL39_HUMAN  (P62891    ), RL39_HYPBU  (A2BN55    ), 
RL39_ICTPU  (Q90YS9    ), RL39_KLULA  (Q6CW22    ), RL39_KLUMA  (P48536    ), 
RL39_MAIZE  (P51425    ), RL39_META3  (A6UVQ6    ), RL39_METAC  (Q8TIN2    ), 
RL39_METBF  (Q46FA3    ), RL39_METBU  (Q12ZJ3    ), RL39_METJA  (P54056    ), 
RL39_METKA  (Q8TUY3    ), RL39_METLZ  (A2STI9    ), RL39_METM5  (A4G029    ), 
RL39_METM6  (A9A8D5    ), RL39_METM7  (A6VIE9    ), RL39_METMA  (Q8PYQ5    ), 
RL39_METMJ  (A3CWZ6    ), RL39_METMP  (Q6M0V9    ), RL39_METS5  (A4YH79    ), 
RL39_METTH  (O27650    ), RL39_METVS  (A6URE0    ), RL39_MOUSE  (P62892    ), 
RL39_PICTO  (Q6L2L2    ), RL39_PLUXY  (Q6F482    ), RL39_PYRAB  (Q9UYI8    ), 
RL39_PYRAE  (Q8ZTX6    ), RL39_PYRAR  (A4WLS6    ), RL39_PYRCJ  (A3MUU4    ), 
RL39_PYRFU  (Q8U3S6    ), RL39_PYRHO  (P59473    ), RL39_PYRIL  (A1RRN8    ), 
RL39_PYRNV  (B1YAF1    ), RL39_RAT    (P62893    ), RL39_SCHPO  (P05767    ), 
RL39_SPOFR  (Q962S4    ), RL39_SULAC  (P13005    ), RL39_SULIA  (C3MZB1    ), 
RL39_SULIK  (C4KII9    ), RL39_SULIL  (C3MR76    ), RL39_SULIM  (C3MXG5    ), 
RL39_SULIN  (C3NGA3    ), RL39_SULIY  (C3N7D1    ), RL39_SULSO  (Q980F9    ), 
RL39_SULTO  (Q971I1    ), RL39_TETTS  (P0DJ61    ), RL39_THEAC  (Q9HM18    ), 
RL39_THEGJ  (C5A7H4    ), RL39_THEKO  (Q5JGT6    ), RL39_THESM  (C6A264    ), 
RL39_THEVO  (Q97CU2    ), RL39_YEAST  (P04650    )
» more

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

RL39_DESK1  (B8D5Q7    ), RL39_METPE  (B8GEU4    ), RL39_METS3  (A5UL33    ), 
RL39_STAMF  (A3DNH3    ), RL39_THEON  (B6YWY4    )
» more

PDB
[Detailed view]
1 PDB

1YJ9

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