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| Entry: PS00105 |
| General information about the entry | |
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| Entry name | AA_TRANSFER_CLASS_1 |
| Accession number | PS00105 |
| Entry type | PATTERN |
| Date | APR-1990 (CREATED); APR-2006 (DATA UPDATE); APR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00098 |
| Name and characterization of the entry | |
| Description | Aminotransferases class-I pyridoxal-phosphate attachment site. |
| Pattern | [GS]-[LIVMFYTAC]-[GSTA]-K-x(2)-[GSALVN]-[LIVMFA]-x-[GNAR]-{V}-R-[LIVMA]- [GA]. |
| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:1A111_ARATH (Q9S9U6), 1A112_ARATH (Q8GYY0), 1A11_ARATH (Q06429), 1A11_CUCMA (P23599), 1A11_CUCPE (P23279), 1A11_ORYSI (A2XLL2), 1A11_ORYSJ (Q10DK7), 1A11_PRUMU (Q9MB95), 1A12_ARATH (Q06402), 1A12_CUCMA (Q00257), 1A12_CUCPE (Q00379), 1A12_SOLLC (P18485), 1A13_SOLLC (Q42881), 1A14_ARATH (Q43309), 1A14_SOLLC (P29535), 1A15_ARATH (Q37001), 1A16_ARATH (Q9SAR0), 1A17_ARATH (Q9STR4), 1A18_ARATH (Q9T065), 1A19_ARATH (Q9M2Y8), 1A1C_DIACA (P27486), 1A1C_MALDO (P37821), 1A1C_SOYBN (P31531), 1A1C_TOBAC (Q07262), 1A1C_VIGRR (Q01912), 1A1L1_TAKRU (Q9W698), AAT1_ARATH (P46643), AAT1_BACSU (P53001), AAT1_MEDSA (P28011), AAT1_METJA (Q60317), AAT2_ARATH (P46645), AAT2_BACSU (P39643), AAT2_METJA (Q58097), AAT3_ARATH (P46644), AAT3_BACSU (O07587), AAT4_ARATH (P46646), AAT5_ARATH (P46248), AATA_RHIME (Q02635), AATB_RHIME (P58350), AATB_RHIML (Q06191), AATC_BOVIN (P33097), AATC_CAEEL (Q22067), AATC_CHICK (P00504), AATC_DAUCA (P28734), AATC_HORSE (P08906), AATC_HUMAN (P17174), AATC_MACFA (Q4R5L1), AATC_MOUSE (P05201), AATC_ORYSJ (P37833), AATC_PANTR (A5A6K8), AATC_PIG (P00503), AATC_PONAB (Q5R691), AATC_RAT (P13221), AATC_RHIME (O87320), AATC_YEAST (P23542), AATM_BOVIN (P12344), AATM_CHICK (P00508), AATM_DICDI (Q55F21), AATM_HORSE (P08907), AATM_HUMAN (P00505), AATM_LUPAN (P26563), AATM_MACFA (Q4R559), AATM_MOUSE (P05202), AATM_PIG (P00506), AATM_PONAB (Q5REB0), AATM_RAT (P00507), AATM_SCHPO (O94320), AATM_XENTR (Q28F67), AATM_YEAST (Q01802), AAT_BACY2 (P23034), AAT_ECOLI (P00509), AAT_GEOSE (Q59228), AAT_HAEIN (P44425), AAT_PSEAE (P72173), AAT_PYRAB (Q9V0L2), AAT_PYRHO (O58489), AAT_PYRKO (O93744), AAT_RHILP (O86459), AAT_RICBR (Q1RGV0), AAT_RICCN (Q92JE7), AAT_RICFE (Q4UND3), AAT_RICPR (Q9ZE56), AAT_RICTY (Q68XV9), AAT_SALTI (Q56114), AAT_SALTY (P58661), AAT_STRVG (Q60013), AAT_SULAC (Q4J8X2), AAT_SULSO (P14909), AAT_SULTO (Q972A2), AAT_SYNY3 (Q55128), AAT_THEAQ (O33822), AAT_THEMA (Q9X0Y2), AAT_THET8 (Q56232), ARUH_PSEAE (Q9HUI9), ASDA_COMTE (Q93QX0), ASDP_PSESP (Q53IZ1), ATTY_BOVIN (Q58CZ9), ATTY_DICDI (Q54K95), ATTY_HUMAN (P17735), ATTY_MOUSE (Q8QZR1), ATTY_RAT (P04694), ATTY_RHIME (Q02636), ATTY_TRYCR (P33447), BNA3_YEAST (P47039), COBC_PSEAE (Q9I468), COBC_PSEDE (P21633), COBDQ_LEPIN (Q8EXQ7), COBD_SALTI (Q8Z8H8), COBD_SALTY (P97084), DAPAT_AQUAE (O66630), DAPAT_AZOPC (B6YRL2), DAPAT_CARHZ (Q3AC10), DAPAT_CHLMU (Q9PK04), DAPAT_CHLPN (Q9Z856), DAPAT_CHLT2 (B0B7W0), DAPAT_CHLTA (Q3KLW3), DAPAT_CHLTB (B0BC25), DAPAT_CHLTR (O84395), DAPAT_CLOPH (A9KJ19), DAPAT_DEHE1 (Q3Z8H5), DAPAT_DEHSB (A5FRC5), DAPAT_DEHSC (Q3ZXC8), DAPAT_DESAP (B1I544), DAPAT_DESDG (Q30ZX9), DAPAT_DESVH (Q72BI1), DAPAT_DESVM (B8DJJ6), DAPAT_DESVV (A1VDD3), DAPAT_GLOVI (Q7NDX4), DAPAT_HALOH (B8CX89), DAPAT_METJA (Q58786), DAPAT_METMP (Q6LX26), DAPAT_MOOTA (Q2RK33), DAPAT_NATTJ (B2A250), DAPAT_SYNFM (A0LEA5), DAPT2_ANAVT (Q3MDN5), DAPT2_NOSS1 (Q8YP73), HIS82_HAEIN (Q57004), PATA_BACSU (P16524), PAT_ARATH (Q9SIE1), PAT_PETHY (E9L7A5), PAT_PINPS (Q5F4K8), PHHC_PSEAE (P43336), TYRB_ECOLI (P04693), TYRB_KLEPN (O85746), TYRB_SALTY (P74861), Y2231_MYCTU (P63500), Y2256_MYCBO (P63501), YUGH_BACSU (Q795M6)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): 1A110_ARATH (Q9LQ10), 1A1L1_BOVIN (Q5E9H2), 1A1L1_HUMAN (Q96QU6), 1A1L1_MOUSE (A2AIG8), 1A1L2_HUMAN (Q4AC99), 1A1L2_MOUSE (Q3UX83), AATC2_BOVIN (Q2T9S8), AATC2_HUMAN (Q8NHS2), AATC2_MOUSE (Q7TSV6), AATC_DICDI (Q54SF7), AATC_SCHPO (O42652), AAT_AQUAE (O67781), AAT_MYCBO (P63499), AAT_MYCTU (P63498), ALAA_ECOL6 (P0A960), ALAA_ECOLI (P0A959), ALAA_HAEIN (P71348), ALAA_SHIFL (P0A961), ALAC_ECOLI (P77434), DAPAT_ACAM1 (B0CDH5), DAPAT_ARATH (Q93ZN9), DAPAT_BACFN (Q5LC03), DAPAT_BACFR (Q64SY6), DAPAT_BACTN (Q8AAB8), DAPAT_BACV8 (A6L7E4), DAPAT_CHLAB (Q5L6M0), DAPAT_CHLCV (Q824A4), DAPAT_CHLFF (Q253K9), DAPAT_CLOTH (A3DK17), DAPAT_CYAA5 (B1WSG7), DAPAT_CYAP4 (B8HJY4), DAPAT_CYAP7 (B7KL61), DAPAT_CYAP8 (B7JVL5), DAPAT_DESAD (C6BUK3), DAPAT_DESAH (C0QFJ4), DAPAT_DESDA (B8IZX8), DAPAT_DESHD (Q18T09), DAPAT_DESHY (Q24S01), DAPAT_DESOH (A8ZXV5), DAPAT_DESPS (Q6AL81), DAPAT_EUBE2 (C4Z4Y1), DAPAT_EUBR3 (C4ZG66), DAPAT_GEOBB (B5EGX2), DAPAT_GEOLS (B3E933), DAPAT_GEOMG (Q39Z65), DAPAT_GEOSF (B9M384), DAPAT_GEOSL (Q74GT3), DAPAT_GEOSM (C6E9Q7), DAPAT_GEOUR (A5GD93), DAPAT_HELMI (B0TA38), DAPAT_LAWIP (Q1MR87), DAPAT_LEPBA (B0SEH8), DAPAT_LEPBJ (Q04UL5), DAPAT_LEPBL (Q04YV8), DAPAT_LEPBP (B0SMK7), DAPAT_LEPIC (Q72NJ3), DAPAT_LEPIN (Q8F814), DAPAT_METS3 (A5UN82), DAPAT_METST (Q2NFU1), DAPAT_METTH (O26158), DAPAT_MICAN (B0JUM0), DAPAT_NOSP7 (B2J2U3), DAPAT_PARD8 (A6L8U2), DAPAT_PARUW (Q6MDE0), DAPAT_PELCD (Q3A1U5), DAPAT_PELPD (A1ATI6), DAPAT_PROM0 (A3PEY9), DAPAT_PROM1 (A2C4T7), DAPAT_PROM3 (A2CC97), DAPAT_PROM4 (A9BCJ1), DAPAT_PROM5 (A2BYM6), DAPAT_PROM9 (Q318P3), DAPAT_PROMA (Q7VA14), DAPAT_PROMM (Q7V4Z3), DAPAT_PROMP (Q7UZZ3), DAPAT_PROMS (A2BT75), DAPAT_PROMT (Q46IX2), DAPAT_SYNE7 (Q31PY6), DAPAT_SYNJA (Q2JS04), DAPAT_SYNJB (Q2JLL9), DAPAT_SYNP2 (B1XKF6), DAPAT_SYNP6 (Q5N492), DAPAT_SYNPW (A5GIN1), DAPAT_SYNPX (Q7U4C3), DAPAT_SYNR3 (A5GW23), DAPAT_SYNS3 (Q0ID68), DAPAT_SYNS9 (Q3AW44), DAPAT_SYNSC (Q3AMU5), DAPAT_SYNY3 (Q55828), DAPAT_THEEB (Q8DH57), DAPAT_TRIEI (Q10ZC3), DAPT1_ANAVT (Q3MAL4), DAPT1_NOSS1 (Q8YM38), LYSN_THET2 (Q72LL6), NAATA_HORVU (Q9ST02), NAATB_HORVU (Q9ST03), TYRB_PARDE (P95468), Y104_SULSO (P95957), Y6286_MYCS2 (A0R5R7), YBDL_ECOLI (P77806)`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): AAT1_PSEMZ (P85906), AAT2_PSEMZ (P85951), AATC_RABIT (P12343), AATM_CATRO (P85310), AATM_RABIT (P12345), AAT_METEX (P52069), AAT_STRGR (P36692)False positive hits (sequences which do not belong to the set under consideration): BAME1_ARATH (O49545), BAME2_ARATH (Q9M2Z1), CLP1_NEUCR (Q7SAB7), DRB3_ORYSJ (Q0DJA3), DRB7_ORYSJ (Q0IV63), DRB8_ORYSJ (Q0IQN6), HIS81_MANSM (Q65S79), HIS82_ARCFU (O28255), MILK1_HUMAN (Q8N3F8), MILK1_MOUSE (Q8BGT6), RBKTP_CUPNH (Q0K3R9), RBKTP_CUPTR (B2AIF3), TDCD_YERE8 (A1JIM9), TRXR3_MOUSE (Q99MD6), WDR46_CANFA (Q5TJE7), WDR46_HUMAN (O15213), Y1341_ARATH (C0LGF5)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] |
1AAM; 1AAT; 1AAW; 1AHE; 1AHF; 1AHG; 1AHX; 1AHY; 1AJS; 1AMA; 1AMQ; 1AMR; 1AMS; 1ARG; 1ARH; 1ARI; 1ARS; 1ART; 1ASA; 1ASB; 1ASC; 1ASD; 1ASE; 1ASF; 1ASG; 1ASL; 1ASM; 1ASN; 1B4X; 1B5O; 1B5P; 1B8G; 1BKG; 1C9C; 1CQ6; 1CQ7; 1CQ8; 1CZC; 1CZE; 1G4V; 1G4X; 1G7W; 1G7X; 1GC3; 1GC4; 1GCK; 1IAX; 1IAY; 1IVR; 1IX6; 1IX7; 1IX8; 1LC5; 1LC7; 1LC8; 1LKC; 1M4N; 1M7Y; 1MAP; 1MAQ; 1O4S; 1OXO; 1OXP; 1QIR; 1QIS; 1QIT; 1SPA; 1TAR; 1TAS; 1TAT; 1X28; 1X29; 1X2A; 1YAA; 1YNU; 1YOO; 2CST; 2D5Y; 2D61; 2D63; 2D64; 2D65; 2D66; 2D7Y; 2D7Z; 2GEA; 2ZY2; 2ZY3; 2ZY4; 2ZY5; 3AAT; 3ASA; 3DYD; 3FSL; 3II0; 3PD6; 3PDB; 3PIU; 3QPG; 3TAT; 3ZZJ; 3ZZK; 4A00; 5BJ3; 5BJ4; 5EAA; 7AAT; 8AAT; 9AAT; |
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