Entry: PS00140

General information about the entry
Entry name UCH_1
Accession number PS00140
Entry type PATTERN
Date APR-1990 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00127
Associated ProRule PRU10091
Name and characterization of the entry
DescriptionUbiquitin carboxyl-terminal hydrolase family 1 cysteine active-site.
Pattern Q-x(3)-N-[SA]-C-G-x(3)-[LIVM](2)-H-[SA]-[LIVM]-[SA].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 17 hits in 17 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 17 hits in 17 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 29
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 36.96 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 5,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
UBL1_YEAST  (P35127), UBLH1_SCHPO (Q10171), UCHL1_BOVIN (P23356), 
UCHL1_HORSE (Q9GM50), UCHL1_HUMAN (P09936), UCHL1_MACFA (Q60HC8), 
UCHL1_MONDO (P50103), UCHL1_MOUSE (Q9R0P9), UCHL1_PIG   (Q6SEG5), 
UCHL1_RAT   (Q00981), UCHL3_BOVIN (Q2TBG8), UCHL3_HUMAN (P15374), 
UCHL3_MOUSE (Q9JKB1), UCHL3_PIG   (Q06AB3), UCHL3_RAT   (Q91Y78), 
UCHL_APLCA  (O01391), UCHL_DROME  (P35122)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
BAP1_BOVIN  (A2VDM8), BAP1_BRAFL  (C4A0D9), BAP1_CHICK  (Q5F3N6), 
BAP1_DANRE  (A1L2G3), BAP1_HUMAN  (Q92560), BAP1_MOUSE  (Q99PU7), 
BAP1_RAT    (D3ZHS6), BAP1_XENLA  (Q52L14), BAP1_XENTR  (Q66JB6), 
CALYP_AEDAE (Q17N72), CALYP_CULQU (B0W2R4), CALYP_DROAN (B3MIV9), 
CALYP_DROER (B3NPV7), CALYP_DROGR (B4JW98), CALYP_DROME (Q7K5N4), 
CALYP_DROMO (B4KT51), CALYP_DROPE (B4GAM2), CALYP_DROPS (Q291J4), 
CALYP_DROSE (B4HST0), CALYP_DROSI (B4QHH0), CALYP_DROVI (B4LQ24), 
CALYP_DROYA (B4P6P6), UBH4_CAEEL  (Q09444), UBLH2_SCHPO (Q9UUB6), 
UCHL4_MOUSE (P58321), UCHL5_BOVIN (Q9XSJ0), UCHL5_DICDI (Q54N38), 
UCHL5_HUMAN (Q9Y5K5), UCHL5_MOUSE (Q9WUP7)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1CMX; 1UCH; 1XD3; 2ETL; 2LEN; 3IFW; 3IRT; 3KVF; 3KW5; 4DM9;

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