Entry: PS00185

General information about the entry

Entry name [info] IPNS_1
Accession [info] PS00185
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00165

Name and characterization of the entry

Description [info] Isopenicillin N synthase signature 1.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_06 which contains 548'586 sequence entries.

Total number of hits 19 in 19 different sequences
Number of true positive hits 12 in 12 different sequences
Number of 'unknown' hits
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 63.16 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 7
Version [info] 1

Cross-references [info]

True positive sequences
12 sequences

EXPA_ACRCH  (P11935), IPNS_ACRCH  (P05189), IPNS_AMYLA  (P27744), 
IPNS_EMENI  (P05326), IPNS_FLASS  (P16020), IPNS_LYSLA  (Q48739), 
IPNS_PENCH  (P08703), IPNS_STRC2  (P10621), IPNS_STRCT  (Q53932), 
IPNS_STRGR  (Q54243), IPNS_STRJU  (P18286), IPNS_STRMI  (P12438)
» More

False negative sequences
2 sequences

CEFE_AMYLA  (Q03047), CEFE_STRC2  (P18548)

False positive sequences
7 sequences

HYAS1_HUMAN (Q92839), HYAS1_MOUSE (Q61647), NT56_DROVI  (Q24332), 
RIR1_CHLTR  (O84834)
» More

[Detailed view]
39 PDB

1BK0; 1BLZ; 1HB1; 1HB2; 1HB3; 1HB4; 1IPS; 1OBN; 1OC1; 1ODM; 1ODN; 1QIQ; 1QJE; 1QJF; 1UZW; 1W03; 1W04; 1W05; 1W06; 1W3V; 1W3X; 2BJS; 2BU9; 2IVI; 2IVJ; 2JB4; 2VAU; 2VBB; 2VBD; 2VBP; 2VCM; 2VE1; 2WO7; 2Y60; 2Y6F; 3ZKU; 3ZKY; 3ZOI; 4BB3
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission