Entry: PS00186

General information about the entry

Entry name [info] IPNS_2
Accession [info] PS00186
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-1990 (DATA UPDATE); MAR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00165

Name and characterization of the entry

Description [info] Isopenicillin N synthase signature 2.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_05 which contains 548'454 sequence entries.

Total number of hits 16 in 16 different sequences
Number of true positive hits 12 in 12 different sequences
Number of 'unknown' hits
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 75.00 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 3
Version [info] 1

Cross-references [info]

True positive sequences
12 sequences

CEFE_STRC2  (P18548), EXPA_ACRCH  (P11935), IPNS_ACRCH  (P05189), 
IPNS_EMENI  (P05326), IPNS_FLASS  (P16020), IPNS_LYSLA  (Q48739), 
IPNS_PENCH  (P08703), IPNS_STRC2  (P10621), IPNS_STRCT  (Q53932), 
IPNS_STRGR  (Q54243), IPNS_STRJU  (P18286), IPNS_STRMI  (P12438)
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False negative sequences
2 sequences

CEFE_AMYLA  (Q03047), IPNS_AMYLA  (P27744)

False positive sequences
4 sequences

PGRP1_BOSIN (B5T255), PGRP1_BOVIN (Q8SPP7), Y3471_BRADU (Q89PK9), 
Y4391_ARATH (Q9T020)
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[Detailed view]
56 PDB

1BK0; 1BLZ; 1DCS; 1E5H; 1E5I; 1HB1; 1HB2; 1HB3; 1HB4; 1HJF; 1HJG; 1IPS; 1OBN; 1OC1; 1ODM; 1ODN; 1QIQ; 1QJE; 1QJF; 1RXF; 1RXG; 1UNB; 1UO9; 1UOB; 1UOF; 1UOG; 1UZW; 1W03; 1W04; 1W05; 1W06; 1W28; 1W2A; 1W2N; 1W2O; 1W3V; 1W3X; 2BJS; 2BU9; 2IVI; 2IVJ; 2JB4; 2JB8; 2VAU; 2VBB; 2VBD; 2VBP; 2VCM; 2VE1; 2WO7; 2Y60; 2Y6F; 3ZKU; 3ZKY; 3ZOI; 4BB3
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