Entry: PS00188

General information about the entry

Entry name [info] BIOTIN
Accession [info] PS00188
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2001 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00167

Name and characterization of the entry

Description [info] Biotin-requiring enzymes attachment site.
Pattern [info]
[GDN]-[DEQTR]-x-[LIVMFY]-x(2)-[LIVM]-x-[AIV]-M-K-[LVMAT]-x(3)-[LIVM]-x-
[SAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 74 in 74 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 13
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.06 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] biotin at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
74 sequences

2OCL_HYDTT  (D3DJ41    ), ACACA_BOVIN (Q9TTS3    ), ACACA_HUMAN (Q13085    ), 
ACACA_MOUSE (Q5SWU9    ), ACACA_RAT   (P11497    ), ACACA_SHEEP (Q28559    ), 
ACAC_CHICK  (P11029    ), ACAC_DICDI  (Q54J08    ), ACAC_SCHPO  (P78820    ), 
ACAC_YEAST  (Q00955    ), ACC1_ARATH  (Q38970    ), ACC2_ARATH  (F4I1L3    ), 
BCCA_MYCBO  (P0A509    ), BCCA_MYCLE  (P46392    ), BCCA_MYCTO  (P9WPQ2    ), 
BCCA_MYCTU  (P9WPQ3    ), BCCP1_ARATH (Q42533    ), BCCP2_ARATH (Q9LLC1    ), 
BCCP_BACSU  (P49786    ), BCCP_CHLMU  (Q9PKR5    ), BCCP_CHLPN  (Q9Z901    ), 
BCCP_CHLTR  (O84125    ), BCCP_CYACA  (O19918    ), BCCP_ECO57  (P0ABE0    ), 
BCCP_ECOL6  (P0ABD9    ), BCCP_ECOLI  (P0ABD8    ), BCCP_HAEIN  (P43874    ), 
BCCP_NOSS1  (Q06881    ), BCCP_PORPU  (P51283    ), BCCP_PROFR  (P02904    ), 
BCCP_PSEAE  (P37799    ), BCCP_PYRYE  (Q1XDK5    ), BCCP_SHIFL  (P0ABE1    ), 
BCCP_SOLLC  (P05115    ), BCCP_SOYBN  (Q42783    ), BCCP_STRMU  (P29337    ), 
BCCP_STRP6  (Q5XAE6    ), DCOA_KLEPN  (P13187    ), DCOA_SALTI  (Q8XGX8    ), 
DCOA_SALTY  (Q03030    ), DUR1_LACKL  (A5H0J2    ), DUR1_YEAST  (P32528    ), 
GCDC_ACIFV  (Q9ZAA7    ), HFA1_YEAS1  (B3LM95    ), HFA1_YEAS2  (C7GRE4    ), 
HFA1_YEAS7  (A6ZMR9    ), HFA1_YEAS8  (C8ZF72    ), HFA1_YEAST  (P32874    ), 
LAMA_EMENI  (P38095    ), MCCA_ARATH  (Q42523    ), MCCA_DICDI  (Q54KE6    ), 
MCCA_HUMAN  (Q96RQ3    ), MCCA_MOUSE  (Q99MR8    ), MCCA_ORYSJ  (Q2QMG2    ), 
MCCA_RAT    (Q5I0C3    ), MCCA_SOYBN  (Q42777    ), PCCA_CAEBR  (Q612F5    ), 
PCCA_CAEEL  (Q19842    ), PCCA_HUMAN  (P05165    ), PCCA_MOUSE  (Q91ZA3    ), 
PCCA_RAT    (P14882    ), PYC1_YEAST  (P11154    ), PYC2_YEAST  (P32327    ), 
PYCB_METJA  (Q58628    ), PYC_ASPNG   (Q9HES8    ), PYC_ASPTE   (O93918    ), 
PYC_ASPTN   (Q0CLK1    ), PYC_BOVIN   (Q29RK2    ), PYC_HUMAN   (P11498    ), 
PYC_MOUSE   (Q05920    ), PYC_PICAN   (Q8X1T3    ), PYC_PICPA   (P78992    ), 
PYC_RAT     (P52873    ), PYC_SCHPO   (Q9UUE1    )
» more

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

ACACB_HUMAN (O00763    ), ACC1_ORYSJ  (Q8S6N5    ), ACC2_ORYSJ  (B9FK36    ), 
BLAP_BACSU  (C0H419    ), BTB7_MYCBO  (P0A511    ), BTB7_MYCLE  (Q9CCH9    ), 
BTB7_MYCS2  (Q9XCD6    ), BTB7_MYCTO  (P9WPQ0    ), BTB7_MYCTU  (P9WPQ1    ), 
MADF_MALRU  (O06930    ), PYC1_CAEEL  (O17732    ), PYCB_METTH  (O27179    ), 
PYC_BACSU   (Q9KWU4    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PCCA_MYXXA  (P81185    )

		
PDB
[Detailed view]
12 PDB

1A6X; 1BDO; 1DCZ; 1DD2; 1O78; 2BDO; 2EJM; 3BDO; 3BG3; 4HR7; 5CSA; 5CSL

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