Entry: PS00188

General information about the entry

Entry name [info] BIOTIN
Accession [info] PS00188
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2001 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00167

Name and characterization of the entry

Description [info] Biotin-requiring enzymes attachment site.
Pattern [info]
[GDN]-[DEQTR]-x-[LIVMFY]-x(2)-[LIVM]-x-[AIV]-M-K-[LVMAT]-x(3)-[LIVM]-x-
[SAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 74 in 74 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 13
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.06 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] biotin at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
74 sequences

2OCL_HYDTT  (D3DJ41), ACACA_BOVIN (Q9TTS3), ACACA_HUMAN (Q13085), 
ACACA_MOUSE (Q5SWU9), ACACA_RAT   (P11497), ACACA_SHEEP (Q28559), 
ACAC_CHICK  (P11029), ACAC_DICDI  (Q54J08), ACAC_SCHPO  (P78820), 
ACAC_YEAST  (Q00955), ACC1_ARATH  (Q38970), ACC2_ARATH  (F4I1L3), 
BCCA_MYCBO  (P0A509), BCCA_MYCLE  (P46392), BCCA_MYCTO  (P9WPQ2), 
BCCA_MYCTU  (P9WPQ3), BCCP1_ARATH (Q42533), BCCP2_ARATH (Q9LLC1), 
BCCP_BACSU  (P49786), BCCP_CHLMU  (Q9PKR5), BCCP_CHLPN  (Q9Z901), 
BCCP_CHLTR  (O84125), BCCP_CYACA  (O19918), BCCP_ECO57  (P0ABE0), 
BCCP_ECOL6  (P0ABD9), BCCP_ECOLI  (P0ABD8), BCCP_HAEIN  (P43874), 
BCCP_NOSS1  (Q06881), BCCP_PORPU  (P51283), BCCP_PROFR  (P02904), 
BCCP_PSEAE  (P37799), BCCP_PYRYE  (Q1XDK5), BCCP_SHIFL  (P0ABE1), 
BCCP_SOLLC  (P05115), BCCP_SOYBN  (Q42783), BCCP_STRMU  (P29337), 
BCCP_STRP6  (Q5XAE6), DCOA_KLEPN  (P13187), DCOA_SALTI  (Q8XGX8), 
DCOA_SALTY  (Q03030), DUR1_LACKL  (A5H0J2), DUR1_YEAST  (P32528), 
GCDC_ACIFV  (Q9ZAA7), HFA1_YEAS1  (B3LM95), HFA1_YEAS2  (C7GRE4), 
HFA1_YEAS7  (A6ZMR9), HFA1_YEAS8  (C8ZF72), HFA1_YEAST  (P32874), 
LAMA_EMENI  (P38095), MCCA_ARATH  (Q42523), MCCA_DICDI  (Q54KE6), 
MCCA_HUMAN  (Q96RQ3), MCCA_MOUSE  (Q99MR8), MCCA_ORYSJ  (Q2QMG2), 
MCCA_RAT    (Q5I0C3), MCCA_SOYBN  (Q42777), PCCA_CAEBR  (Q612F5), 
PCCA_CAEEL  (Q19842), PCCA_HUMAN  (P05165), PCCA_MOUSE  (Q91ZA3), 
PCCA_RAT    (P14882), PYC1_YEAST  (P11154), PYC2_YEAST  (P32327), 
PYCB_METJA  (Q58628), PYC_ASPNG   (Q9HES8), PYC_ASPTE   (O93918), 
PYC_ASPTN   (Q0CLK1), PYC_BOVIN   (Q29RK2), PYC_HUMAN   (P11498), 
PYC_MOUSE   (Q05920), PYC_PICAN   (Q8X1T3), PYC_PICPA   (P78992), 
PYC_RAT     (P52873), PYC_SCHPO   (Q9UUE1)
» More

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

ACACB_HUMAN (O00763), ACC1_ORYSJ  (Q8S6N5), ACC2_ORYSJ  (B9FK36), 
BLAP_BACSU  (C0H419), BTB7_MYCBO  (P0A511), BTB7_MYCLE  (Q9CCH9), 
BTB7_MYCS2  (Q9XCD6), BTB7_MYCTO  (P9WPQ0), BTB7_MYCTU  (P9WPQ1), 
MADF_MALRU  (O06930), PYC1_CAEEL  (O17732), PYCB_METTH  (O27179), 
PYC_BACSU   (Q9KWU4)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PCCA_MYXXA  (P81185)

		
PDB
[Detailed view]
10 PDB

1A6X; 1BDO; 1DCZ; 1DD2; 1O78; 2BDO; 2EJM; 3BDO; 3BG3; 4HR7

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission