Entry: PS00188

Forthcoming changes to the profile format
General information about the entry

Entry name [info] BIOTIN
Accession [info] PS00188
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2001 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00167

Name and characterization of the entry

Description [info] Biotin-requiring enzymes attachment site.
Pattern [info]
[GDN]-[DEQTR]-x-[LIVMFY]-x(2)-[LIVM]-x-[AIV]-M-K-[LVMAT]-x(3)-[LIVM]-x-
[SAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 74 in 74 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 13
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.06 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] biotin at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
74 sequences

2OCL_HYDTT  (D3DJ41), ACACA_BOVIN (Q9TTS3), ACACA_HUMAN (Q13085), 
ACACA_MOUSE (Q5SWU9), ACACA_RAT   (P11497), ACACA_SHEEP (Q28559), 
ACAC_CHICK  (P11029), ACAC_DICDI  (Q54J08), ACAC_SCHPO  (P78820), 
ACAC_YEAST  (Q00955), ACC1_ARATH  (Q38970), ACC2_ARATH  (F4I1L3), 
BCCA_MYCBO  (P0A509), BCCA_MYCLE  (P46392), BCCA_MYCTO  (P9WPQ2), 
BCCA_MYCTU  (P9WPQ3), BCCP1_ARATH (Q42533), BCCP2_ARATH (Q9LLC1), 
BCCP_BACSU  (P49786), BCCP_CHLMU  (Q9PKR5), BCCP_CHLPN  (Q9Z901), 
BCCP_CHLTR  (O84125), BCCP_CYACA  (O19918), BCCP_ECO57  (P0ABE0), 
BCCP_ECOL6  (P0ABD9), BCCP_ECOLI  (P0ABD8), BCCP_HAEIN  (P43874), 
BCCP_NOSS1  (Q06881), BCCP_PORPU  (P51283), BCCP_PROFR  (P02904), 
BCCP_PSEAE  (P37799), BCCP_PYRYE  (Q1XDK5), BCCP_SHIFL  (P0ABE1), 
BCCP_SOLLC  (P05115), BCCP_SOYBN  (Q42783), BCCP_STRMU  (P29337), 
BCCP_STRP6  (Q5XAE6), DCOA_KLEPN  (P13187), DCOA_SALTI  (Q8XGX8), 
DCOA_SALTY  (Q03030), DUR1_LACKL  (A5H0J2), DUR1_YEAST  (P32528), 
GCDC_ACIFV  (Q9ZAA7), HFA1_YEAS1  (B3LM95), HFA1_YEAS2  (C7GRE4), 
HFA1_YEAS7  (A6ZMR9), HFA1_YEAS8  (C8ZF72), HFA1_YEAST  (P32874), 
LAMA_EMENI  (P38095), MCCA_ARATH  (Q42523), MCCA_DICDI  (Q54KE6), 
MCCA_HUMAN  (Q96RQ3), MCCA_MOUSE  (Q99MR8), MCCA_ORYSJ  (Q2QMG2), 
MCCA_RAT    (Q5I0C3), MCCA_SOYBN  (Q42777), PCCA_CAEBR  (Q612F5), 
PCCA_CAEEL  (Q19842), PCCA_HUMAN  (P05165), PCCA_MOUSE  (Q91ZA3), 
PCCA_RAT    (P14882), PYC1_YEAST  (P11154), PYC2_YEAST  (P32327), 
PYCB_METJA  (Q58628), PYC_ASPNG   (Q9HES8), PYC_ASPTE   (O93918), 
PYC_ASPTN   (Q0CLK1), PYC_BOVIN   (Q29RK2), PYC_HUMAN   (P11498), 
PYC_MOUSE   (Q05920), PYC_PICAN   (Q8X1T3), PYC_PICPA   (P78992), 
PYC_RAT     (P52873), PYC_SCHPO   (Q9UUE1)
» More

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

ACACB_HUMAN (O00763), ACC1_ORYSJ  (Q8S6N5), ACC2_ORYSJ  (B9FK36), 
BLAP_BACSU  (C0H419), BTB7_MYCBO  (P0A511), BTB7_MYCLE  (Q9CCH9), 
BTB7_MYCS2  (Q9XCD6), BTB7_MYCTO  (P9WPQ0), BTB7_MYCTU  (P9WPQ1), 
MADF_MALRU  (O06930), PYC1_CAEEL  (O17732), PYCB_METTH  (O27179), 
PYC_BACSU   (Q9KWU4)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PCCA_MYXXA  (P81185)

		
PDB
[Detailed view]
10 PDB

1A6X; 1BDO; 1DCZ; 1DD2; 1O78; 2BDO; 2EJM; 3BDO; 3BG3; 4HR7

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission