Entry: PS00326

General information about the entry

Entry name [info] TROPOMYOSIN
Accession [info] PS00326
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00290

Name and characterization of the entry

Description [info] Tropomyosins signature.
Pattern [info]
L-K-[EAD]-A-E-x-R-A-[ET].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 71 in 71 different sequences
Number of true positive hits 71 in 71 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 86.59 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
71 sequences

TPM1_BIOGL  (P42636    ), TPM1_BOMMO  (Q1HPU0    ), TPM1_BOVIN  (Q5KR49    ), 
TPM1_CAEEL  (Q22866    ), TPM1_CHICK  (P04268    ), TPM1_COTJA  (P58773    ), 
TPM1_DANRE  (P13104    ), TPM1_DROME  (P06754    ), TPM1_HUMAN  (P09493    ), 
TPM1_LIZAU  (P84335    ), TPM1_MOUSE  (P58771    ), TPM1_PIG    (P42639    ), 
TPM1_RABIT  (P58772    ), TPM1_RANTE  (P13105    ), TPM1_RAT    (P04692    ), 
TPM1_SCHMA  (P42637    ), TPM1_XENLA  (Q01173    ), TPM2_BIOGL  (P43689    ), 
TPM2_BOMMO  (Q1HPQ0    ), TPM2_BOVIN  (Q5KR48    ), TPM2_CHICK  (P19352    ), 
TPM2_DROME  (P09491    ), TPM2_HUMAN  (P07951    ), TPM2_MOUSE  (P58774    ), 
TPM2_RABIT  (P58776    ), TPM2_RAT    (P58775    ), TPM3_BOVIN  (Q5KR47    ), 
TPM3_CAEEL  (Q27249    ), TPM3_HUMAN  (P06753    ), TPM3_MOUSE  (P21107    ), 
TPM3_PIG    (A1XQV4    ), TPM3_RAT    (Q63610    ), TPM4_DROME  (P49455    ), 
TPM4_HORSE  (P02561    ), TPM4_HUMAN  (P67936    ), TPM4_MOUSE  (Q6IRU2    ), 
TPM4_PIG    (P67937    ), TPM4_RAT    (P09495    ), TPMM_TRICO  (P15846    ), 
TPM_ACAVI   (O01673    ), TPM_ANISI   (Q9NAS5    ), TPM_BLAGE   (Q9NG56    ), 
TPM_BRABE   (Q9NDS0    ), TPM_CAEBR   (Q60UW4    ), TPM_CHAFE   (Q9N2R3    ), 
TPM_CHIKI   (O96764    ), TPM_CHIOP   (A2V735    ), TPM_CHLNI   (O02389    ), 
TPM_DERFA   (Q23939    ), TPM_DERPT   (O18416    ), TPM_HALDV   (Q9GZ71    ), 
TPM_HALRU   (Q25145    ), TPM_HOMAM   (O44119    ), TPM_LEPDS   (Q9NFZ4    ), 
TPM_LEPSA   (Q8T380    ), TPM_LOCMI   (P31816    ), TPM_METEN   (Q25456    ), 
TPM_MIMNO   (Q9GZ69    ), TPM_MYTED   (Q25457    ), TPM_MYTGA   (P91958    ), 
TPM_ONCVO   (Q25632    ), TPM_PANBO   (P86704    ), TPM_PANST   (O61379    ), 
TPM_PENMO   (A1KYZ2    ), TPM_PERAM   (Q9UB83    ), TPM_PERFU   (Q8T6L5    ), 
TPM_PERVI   (Q9GZ70    ), TPM_SCHHA   (Q26503    ), TPM_SCHJA   (Q26519    ), 
TPM_TRIPS   (Q8WR63    ), TPM_TRISP   (Q95VA8    )
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

TPM1_CIOIN  (Q07068    ), TPM1_HYDVU  (P39921    ), TPM1_PODCA  (P41114    ), 
TPM2_PODCA  (Q9U5M4    ), TPM2_SCHMA  (P42638    ), TPM_CLOSI   (Q23758    ), 
TPM_ECHGR   (O16127    ), TPM_ECHMU   (Q95PU1    ), TPM_HAELO   (Q8IT89    ), 
TPM_HELAS   (O97192    ), TPM_RHIMP   (O97162    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

TPM_TURCO   (Q7M3Y8    )

		
PDB
[Detailed view]
7 PDB

1C1G; 2D3E; 2EFR; 2EFS; 2TMA; 2W49; 2W4U

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission