Entry: PS00326

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General information about the entry

Entry name [info] TROPOMYOSIN
Accession [info] PS00326
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00290

Name and characterization of the entry

Description [info] Tropomyosins signature.
Pattern [info]
L-K-[EAD]-A-E-x-R-A-[ET].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 71 in 71 different sequences
Number of true positive hits 71 in 71 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 11
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 86.59 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
71 sequences

TPM1_BIOGL  (P42636), TPM1_BOMMO  (Q1HPU0), TPM1_BOVIN  (Q5KR49), 
TPM1_CAEEL  (Q22866), TPM1_CHICK  (P04268), TPM1_COTJA  (P58773), 
TPM1_DANRE  (P13104), TPM1_DROME  (P06754), TPM1_HUMAN  (P09493), 
TPM1_LIZAU  (P84335), TPM1_MOUSE  (P58771), TPM1_PIG    (P42639), 
TPM1_RABIT  (P58772), TPM1_RANTE  (P13105), TPM1_RAT    (P04692), 
TPM1_SCHMA  (P42637), TPM1_XENLA  (Q01173), TPM2_BIOGL  (P43689), 
TPM2_BOMMO  (Q1HPQ0), TPM2_BOVIN  (Q5KR48), TPM2_CHICK  (P19352), 
TPM2_DROME  (P09491), TPM2_HUMAN  (P07951), TPM2_MOUSE  (P58774), 
TPM2_RABIT  (P58776), TPM2_RAT    (P58775), TPM3_BOVIN  (Q5KR47), 
TPM3_CAEEL  (Q27249), TPM3_HUMAN  (P06753), TPM3_MOUSE  (P21107), 
TPM3_PIG    (A1XQV4), TPM3_RAT    (Q63610), TPM4_DROME  (P49455), 
TPM4_HORSE  (P02561), TPM4_HUMAN  (P67936), TPM4_MOUSE  (Q6IRU2), 
TPM4_PIG    (P67937), TPM4_RAT    (P09495), TPMM_TRICO  (P15846), 
TPM_ACAVI   (O01673), TPM_ANISI   (Q9NAS5), TPM_BLAGE   (Q9NG56), 
TPM_BRABE   (Q9NDS0), TPM_CAEBR   (Q60UW4), TPM_CHAFE   (Q9N2R3), 
TPM_CHIKI   (O96764), TPM_CHIOP   (A2V735), TPM_CHLNI   (O02389), 
TPM_DERFA   (Q23939), TPM_DERPT   (O18416), TPM_HALDV   (Q9GZ71), 
TPM_HALRU   (Q25145), TPM_HOMAM   (O44119), TPM_LEPDS   (Q9NFZ4), 
TPM_LEPSA   (Q8T380), TPM_LOCMI   (P31816), TPM_METEN   (Q25456), 
TPM_MIMNO   (Q9GZ69), TPM_MYTED   (Q25457), TPM_MYTGA   (P91958), 
TPM_ONCVO   (Q25632), TPM_PANBO   (P86704), TPM_PANST   (O61379), 
TPM_PENMO   (A1KYZ2), TPM_PERAM   (Q9UB83), TPM_PERFU   (Q8T6L5), 
TPM_PERVI   (Q9GZ70), TPM_SCHHA   (Q26503), TPM_SCHJA   (Q26519), 
TPM_TRIPS   (Q8WR63), TPM_TRISP   (Q95VA8)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

TPM1_CIOIN  (Q07068), TPM1_HYDVU  (P39921), TPM1_PODCA  (P41114), 
TPM2_PODCA  (Q9U5M4), TPM2_SCHMA  (P42638), TPM_CLOSI   (Q23758), 
TPM_ECHGR   (O16127), TPM_ECHMU   (Q95PU1), TPM_HAELO   (Q8IT89), 
TPM_HELAS   (O97192), TPM_RHIMP   (O97162)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

TPM_TURCO   (Q7M3Y8)

		
PDB
[Detailed view]
7 PDB

1C1G; 2D3E; 2EFR; 2EFS; 2TMA; 2W49; 2W4U

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