Entry: PS00326

General information about the entry

Entry name [info] TROPOMYOSIN
Accession [info] PS00326
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00290

Name and characterization of the entry

Description [info] Tropomyosins signature.
Pattern [info]
L-K-[EAD]-A-E-x-R-A-[ET].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 71 in 71 different sequences
Number of true positive hits 71 in 71 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 86.59 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
71 sequences

TPM1_BIOGL  (P42636), TPM1_BOMMO  (Q1HPU0), TPM1_BOVIN  (Q5KR49), 
TPM1_CAEEL  (Q22866), TPM1_CHICK  (P04268), TPM1_COTJA  (P58773), 
TPM1_DANRE  (P13104), TPM1_DROME  (P06754), TPM1_HUMAN  (P09493), 
TPM1_LIZAU  (P84335), TPM1_MOUSE  (P58771), TPM1_PIG    (P42639), 
TPM1_RABIT  (P58772), TPM1_RANTE  (P13105), TPM1_RAT    (P04692), 
TPM1_SCHMA  (P42637), TPM1_XENLA  (Q01173), TPM2_BIOGL  (P43689), 
TPM2_BOMMO  (Q1HPQ0), TPM2_BOVIN  (Q5KR48), TPM2_CHICK  (P19352), 
TPM2_DROME  (P09491), TPM2_HUMAN  (P07951), TPM2_MOUSE  (P58774), 
TPM2_RABIT  (P58776), TPM2_RAT    (P58775), TPM3_BOVIN  (Q5KR47), 
TPM3_CAEEL  (Q27249), TPM3_HUMAN  (P06753), TPM3_MOUSE  (P21107), 
TPM3_PIG    (A1XQV4), TPM3_RAT    (Q63610), TPM4_DROME  (P49455), 
TPM4_HORSE  (P02561), TPM4_HUMAN  (P67936), TPM4_MOUSE  (Q6IRU2), 
TPM4_PIG    (P67937), TPM4_RAT    (P09495), TPMM_TRICO  (P15846), 
TPM_ACAVI   (O01673), TPM_ANISI   (Q9NAS5), TPM_BLAGE   (Q9NG56), 
TPM_BRABE   (Q9NDS0), TPM_CAEBR   (Q60UW4), TPM_CHAFE   (Q9N2R3), 
TPM_CHIKI   (O96764), TPM_CHIOP   (A2V735), TPM_CHLNI   (O02389), 
TPM_DERFA   (Q23939), TPM_DERPT   (O18416), TPM_HALDV   (Q9GZ71), 
TPM_HALRU   (Q25145), TPM_HOMAM   (O44119), TPM_LEPDS   (Q9NFZ4), 
TPM_LEPSA   (Q8T380), TPM_LOCMI   (P31816), TPM_METEN   (Q25456), 
TPM_MIMNO   (Q9GZ69), TPM_MYTED   (Q25457), TPM_MYTGA   (P91958), 
TPM_ONCVO   (Q25632), TPM_PANBO   (P86704), TPM_PANST   (O61379), 
TPM_PENMO   (A1KYZ2), TPM_PERAM   (Q9UB83), TPM_PERFU   (Q8T6L5), 
TPM_PERVI   (Q9GZ70), TPM_SCHHA   (Q26503), TPM_SCHJA   (Q26519), 
TPM_TRIPS   (Q8WR63), TPM_TRISP   (Q95VA8)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

TPM1_CIOIN  (Q07068), TPM1_HYDVU  (P39921), TPM1_PODCA  (P41114), 
TPM2_PODCA  (Q9U5M4), TPM2_SCHMA  (P42638), TPM_CLOSI   (Q23758), 
TPM_ECHGR   (O16127), TPM_ECHMU   (Q95PU1), TPM_HAELO   (Q8IT89), 
TPM_HELAS   (O97192), TPM_RHIMP   (O97162)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

TPM_TURCO   (Q7M3Y8)

		
PDB
[Detailed view]
7 PDB

1C1G; 2D3E; 2EFR; 2EFS; 2TMA; 2W49; 2W4U

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