Entry: PS00375

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General information about the entry

Entry name [info] UDPGT
Accession [info] PS00375
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00359

Name and characterization of the entry

Description [info] UDP-glycosyltransferases signature.
Pattern [info]
[FW]-x(2)-[QL]-x(2)-[LIVMYA]-[LIMV]-x(4,6)-[LVGAC]-[LVFYAHM]-[LIVMF]-
[STAGCM]-[HNQ]-[STAGC]-G-x(2)-[STAG]-x(3)-[STAGL]-[LIVMFA]-x(4,5)-[PQR]-
[LIVMTA]-x(3)-[PA]-x(2,3)-[DES]-[QEHNR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 204 in 204 different sequences
Number of true positive hits 204 in 204 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 44
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.26 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
204 sequences

4CGT_ANTMA  (Q33DV3), 5GT1_PERFR  (Q9ZR27), 5GT2_PERFR  (Q9ZR26), 
5GT_GENTR   (B2NID7), 5GT_VERHY   (Q9ZR25), ANGLT_ROSHC (Q4R1I9), 
AOG_PHAAN   (Q8W3P8), AXYLT_ARATH (Q9LVW3), BX8_MAIZE   (Q8W2B7), 
CGT_FRAAN   (Q66PF4), CGT_HUMAN   (Q16880), CGT_MOUSE   (Q64676), 
CGT_RAT     (Q09426), CRTX_ESCVU  (Q01330), CRTX_PANAN  (P21686), 
CZOG1_MAIZE (Q93XP7), CZOG2_MAIZE (Q8RXA5), CZOG_SORBI  (Q6JAH0), 
FLRT_CITMA  (Q8GVE3), GLT2_CROSA  (Q6X1C0), HQGT_RAUSE  (Q9AR73), 
I7GT1_SOYBN (A6BM07), IABG_MAIZE  (Q41819), IH5GT_IRIHO (Q767C8), 
LGT_CITUN   (Q9MB73), MGT_STRLI   (Q54387), OLED_STRAT  (Q53685), 
SCGT_TOBAC  (Q9AT54), SGT2_SOYBN  (D4Q9Z4), U71B1_ARATH (Q9LSY9), 
U71B2_ARATH (Q9LSY8), U71B5_ARATH (O23382), U71B6_ARATH (Q9LSY6), 
U71B7_ARATH (Q9LSY5), U71B8_ARATH (Q9LSY4), U71C1_ARATH (O82381), 
U71C2_ARATH (O82382), U71C3_ARATH (Q9LML7), U71C4_ARATH (Q9LML6), 
U71C5_ARATH (Q9FE68), U71D1_ARATH (O82383), U71D2_ARATH (O82385), 
U72B1_ARATH (Q9M156), U72B2_ARATH (Q8W4C2), U72B3_ARATH (Q9LNI1), 
U72C1_ARATH (O23205), U72D1_ARATH (Q9ZU72), U72E1_ARATH (Q94A84), 
U72E2_ARATH (Q9LVR1), U72E3_ARATH (O81498), U73B1_ARATH (Q8VZE9), 
U73B2_ARATH (Q94C57), U73B3_ARATH (Q8W491), U73B4_ARATH (Q7Y232), 
U73B5_ARATH (Q9ZQG4), U73C1_ARATH (Q9ZQ99), U73C2_ARATH (Q9ZQ98), 
U73C3_ARATH (Q9ZQ96), U73C4_ARATH (Q9ZQ97), U73C5_ARATH (Q9ZQ94), 
U73C6_ARATH (Q9ZQ95), U73C7_ARATH (Q9SCP5), U73D1_ARATH (Q9SCP6), 
U74B1_ARATH (O48676), U74C1_ARATH (Q9SKC1), U74E1_ARATH (P0C7P7), 
U74E2_ARATH (Q9SYK9), U74F1_ARATH (O22820), U74F2_ARATH (O22822), 
U75B1_ARATH (Q9LR44), U75B2_ARATH (Q9ZVY5), U75C1_ARATH (Q0WW21), 
U75D1_ARATH (O23406), U78D2_ARATH (Q9LFJ8), U78D3_ARATH (Q9LFK0), 
U78D4_ARATH (Q9LFJ9), U79B2_ARATH (Q9T080), U79B3_ARATH (Q9T081), 
U79B6_ARATH (Q9FN26), U79B9_ARATH (Q9FN28), U7B10_ARATH (Q9XIQ5), 
U82A1_ARATH (Q9LHJ2), U84A1_ARATH (Q5XF20), U84A2_ARATH (Q9LVF0), 
U84A3_ARATH (O23401), U84A4_ARATH (O23402), U84B1_ARATH (O22182), 
U84B2_ARATH (O22183), U85A1_ARATH (Q9SK82), U85A2_ARATH (Q9ZWJ3), 
U85A3_ARATH (Q9LMF1), U85A4_ARATH (Q9M9E7), U85A5_ARATH (Q9LMF0), 
U85A7_ARATH (Q9LME8), U86A1_ARATH (Q9SJL0), U86A2_ARATH (Q9ZUV0), 
U88A1_ARATH (Q9LK73), U90A1_ARATH (Q9ZVX4), U90A2_ARATH (Q9SY84), 
U91B1_ARATH (Q9LSM0), U92A1_ARATH (Q9LXV0), UD110_HUMAN (Q9HAW8), 
UD11_HUMAN  (P22309), UD11_MOUSE  (Q63886), UD11_RAT    (Q64550), 
UD12_MOUSE  (P70691), UD12_RAT    (P20720), UD13_HUMAN  (P35503), 
UD13_RAT    (Q64637), UD14_HUMAN  (P22310), UD14_RABIT  (Q28612), 
UD15_HUMAN  (P35504), UD15_RAT    (Q64638), UD16_HUMAN  (P19224), 
UD16_MOUSE  (Q64435), UD16_RABIT  (Q28611), UD16_RAT    (P08430), 
UD17C_MOUSE (Q6ZQM8), UD17_HUMAN  (Q9HAW7), UD17_RAT    (Q64633), 
UD18_HUMAN  (Q9HAW9), UD18_RAT    (Q64634), UD19_HUMAN  (O60656), 
UD19_MOUSE  (Q62452), UD2A1_HUMAN (Q9Y4X1), UD2A1_MOUSE (Q80X89), 
UD2A1_RAT   (P36510), UD2A2_MOUSE (Q6PDD0), UD2A3_CAVPO (Q9R110), 
UD2A3_HUMAN (Q6UWM9), UD2A3_MOUSE (Q8BWQ1), UD2A3_PONAB (Q5RFJ3), 
UD2B1_RAT   (P09875), UD2B2_RAT   (P08541), UD2B4_HUMAN (P06133), 
UD2B7_HUMAN (P16662), UD2B7_RAT   (Q62789), UD2B9_MACFA (O02663), 
UD2C1_RABIT (P36514), UD3A1_BOVIN (Q1LZI1), UD3A1_HUMAN (Q6NUS8), 
UD3A1_MOUSE (Q3UP75), UD3A1_XENLA (Q63ZR6), UD3A2_HUMAN (Q3SY77), 
UD3A2_MOUSE (Q8JZZ0), UDB10_HUMAN (P36537), UDB11_HUMAN (O75310), 
UDB13_RABIT (P36512), UDB14_RABIT (P36513), UDB15_HUMAN (P54855), 
UDB15_RAT   (P36511), UDB16_RABIT (O19103), UDB17_HUMAN (O75795), 
UDB17_MOUSE (P17717), UDB17_RAT   (P08542), UDB18_MACFA (O97951), 
UDB19_MACFA (Q9XT55), UDB20_MACFA (O77649), UDB23_MACFA (Q9TSL6), 
UDB28_HUMAN (Q9BY64), UDB30_MACFA (Q8WN97), UDB31_CANFA (Q6K1J1), 
UDB33_MACMU (Q9GLD9), UDB37_RAT   (P19488), UDPE_GVLO   (Q98166), 
UDPE_NPVAC  (P18569), UDPE_NPVCD  (Q90158), UDPE_NPVCF  (Q90157), 
UDPE_NPVLD  (P41713), UDPE_NPVMB  (Q83140), UDPE_NPVOP  (Q65363), 
UDPE_NPVSL  (Q88168), UFOG1_FRAAN (Q66PF5), UFOG1_MAIZE (P16166), 
UFOG1_MANES (Q40284), UFOG2_FRAAN (Q5UL10), UFOG2_MAIZE (P16165), 
UFOG2_MANES (Q40285), UFOG3_FRAAN (Q66PF3), UFOG3_MAIZE (P16167), 
UFOG4_MANES (Q40286), UFOG5_MANES (Q40287), UFOG6_FRAAN (Q2V6K0), 
UFOG6_MANES (Q40288), UFOG7_FRAAN (Q2V6J9), UFOG7_MANES (Q40289), 
UFOG_GENTR  (Q96493), UFOG_HORVU  (P14726), UFOG_PETHY  (Q43716), 
UFOG_SOLME  (Q43641), UFOG_VITVI  (P51094), UGAT_BELPE  (Q5NTH0), 
UGT3_PLEPL  (Q91280), UGT46_CAEEL (Q10941), UGT48_CAEEL (Q18081), 
UGT50_CAEEL (Q22295), UGT55_CAEEL (Q22180), UGT56_CAEEL (Q22181), 
UGT58_CAEEL (Q20086), UGT60_CAEEL (P34317), UGT_FRAAN   (Q2V6K1), 
URT1_FRAAN  (Q66PF2), ZOG_PHALU   (Q9ZSK5), ZOX_PHAVU   (P56725)
» More

UniProtKB/Swiss-Prot
False negative sequences
44 sequences

ANGT_GENTR  (Q8H0F2), BX9_MAIZE   (B4G072), DUSKY_IPONI (Q53UH4), 
DUSKY_IPOPU (Q53UH5), GLT3_CROSA  (Q6WFW1), HMNGT_SORBI (Q9SBL1), 
KGLT_PETHY  (Q9SBQ8), SGT3_SOYBN  (D4Q9Z5), U74D1_ARATH (Q9SKC5), 
U76C1_ARATH (Q9FI99), U76C2_ARATH (Q9FIA0), U76C3_ARATH (Q9FI96), 
U76C4_ARATH (Q9FI98), U76C5_ARATH (Q9FI97), U76D1_ARATH (O48715), 
U76E1_ARATH (Q9LTH3), U76E2_ARATH (Q9LTH2), U76E3_ARATH (Q494Q1), 
U76E4_ARATH (Q9STE3), U76E5_ARATH (Q9STE6), U76E6_ARATH (Q9SNB0), 
U76E7_ARATH (Q9LS16), U76E9_ARATH (Q9LS21), U76F1_ARATH (Q9M052), 
U76F2_ARATH (Q9M051), U78D1_ARATH (Q9S9P6), U79B4_ARATH (Q9LJA6), 
U79B5_ARATH (Q9LPS8), U79B7_ARATH (Q9M0P3), U79B8_ARATH (O81010), 
U7B11_ARATH (Q9XIQ4), U7E11_ARATH (Q9SNB1), U7E12_ARATH (Q94AB5), 
U83A1_ARATH (Q9SGA8), U87A1_ARATH (O64732), U87A2_ARATH (O64733), 
U89A2_ARATH (Q9LZD8), U89B1_ARATH (Q9C9B0), U89C1_ARATH (Q9LNE6), 
U91A1_ARATH (Q940V3), U91C1_ARATH (Q9LTA3), YDHE_BACSU  (O05496), 
YJIC_BACSU  (O34539), YOJK_BACSU  (O31853)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

UFOG1_TAXBA (P85358)

		
PDB
[Detailed view]
8 PDB

2C1X; 2C1Z; 2C9Z; 2IYF; 2VCE; 2VCH; 2VG8; 4M83

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