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Entry: PS00375
General information about the entry
Entry nameUDPGT
Accession numberPS00375
Entry typePATTERN
DateNOV-1990 (CREATED); DEC-2004 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00359
Name and characterization of the entry
DescriptionUDP-glycosyltransferases signature.
Pattern[FW]-x(2)-[QL]-x(2)-[LIVMYA]-[LIMV]-x(4,6)-[LVGAC]-[LVFYAHM]-[LIVMF]- [STAGCM]-[HNQ]-[STAGC]-G-x(2)-[STAG]-x(3)-[STAGL]-[LIVMFA]-x(4,5)-[PQR]- [LIVMTA]-x(3)-[PA]-x(2,3)-[DES]-[QEHNR].
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 194 hits in 194 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 194 hits in 194 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 40
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 82.91 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
ANGLT_ROSHC (Q4R1I9), AOG_PHAAN   (Q8W3P8), BX8_MAIZE   (Q8W2B7), 
CGT_FRAAN   (Q66PF4), CGT_HUMAN   (Q16880), CGT_MOUSE   (Q64676), 
CGT_RAT     (Q09426), CRTX_ESCVU  (Q01330), CRTX_PANAN  (P21686), 
CZOG1_MAIZE (Q93XP7), CZOG2_MAIZE (Q8RXA5), CZOG_SORBI  (Q6JAH0), 
FLRT_CITMA  (Q8GVE3), HQGT_RAUSE  (Q9AR73), IABG_MAIZE  (Q41819), 
LGT_CITUN   (Q9MB73), MGT_STRLI   (Q54387), OLED_STRAT  (Q53685), 
U71B1_ARATH (Q9LSY9), U71B2_ARATH (Q9LSY8), U71B5_ARATH (O23382), 
U71B6_ARATH (Q9LSY6), U71B7_ARATH (Q9LSY5), U71B8_ARATH (Q9LSY4), 
U71C1_ARATH (O82381), U71C2_ARATH (O82382), U71C3_ARATH (Q9LML7), 
U71C4_ARATH (Q9LML6), U71C5_ARATH (Q9FE68), U71D1_ARATH (O82383), 
U71D2_ARATH (O82385), U72B1_ARATH (Q9M156), U72B2_ARATH (Q8W4C2), 
U72B3_ARATH (Q9LNI1), U72C1_ARATH (O23205), U72D1_ARATH (Q9ZU72), 
U72E1_ARATH (Q94A84), U72E2_ARATH (Q9LVR1), U72E3_ARATH (O81498), 
U73B1_ARATH (Q8VZE9), U73B2_ARATH (Q94C57), U73B3_ARATH (Q8W491), 
U73B4_ARATH (Q7Y232), U73B5_ARATH (Q9ZQG4), U73C1_ARATH (Q9ZQ99), 
U73C2_ARATH (Q9ZQ98), U73C3_ARATH (Q9ZQ96), U73C4_ARATH (Q9ZQ97), 
U73C5_ARATH (Q9ZQ94), U73C6_ARATH (Q9ZQ95), U73C7_ARATH (Q9SCP5), 
U73D1_ARATH (Q9SCP6), U74B1_ARATH (O48676), U74C1_ARATH (Q9SKC1), 
U74E1_ARATH (P0C7P7), U74E2_ARATH (Q9SYK9), U74F1_ARATH (O22820), 
U74F2_ARATH (O22822), U75B1_ARATH (Q9LR44), U75B2_ARATH (Q9ZVY5), 
U75C1_ARATH (Q0WW21), U75D1_ARATH (O23406), U78D2_ARATH (Q9LFJ8), 
U78D3_ARATH (Q9LFK0), U78D4_ARATH (Q9LFJ9), U79B1_ARATH (Q9LVW3), 
U79B2_ARATH (Q9T080), U79B3_ARATH (Q9T081), U79B6_ARATH (Q9FN26), 
U79B9_ARATH (Q9FN28), U7B10_ARATH (Q9XIQ5), U82A1_ARATH (Q9LHJ2), 
U84A1_ARATH (Q5XF20), U84A2_ARATH (Q9LVF0), U84A3_ARATH (O23401), 
U84A4_ARATH (O23402), U84B1_ARATH (O22182), U84B2_ARATH (O22183), 
U85A1_ARATH (Q9SK82), U85A2_ARATH (Q9ZWJ3), U85A3_ARATH (Q9LMF1), 
U85A4_ARATH (Q9M9E7), U85A5_ARATH (Q9LMF0), U85A7_ARATH (Q9LME8), 
U86A1_ARATH (Q9SJL0), U86A2_ARATH (Q9ZUV0), U88A1_ARATH (Q9LK73), 
U90A1_ARATH (Q9ZVX4), U90A2_ARATH (Q9SY84), U91B1_ARATH (Q9LSM0), 
U92A1_ARATH (Q9LXV0), UD110_HUMAN (Q9HAW8), UD11_HUMAN  (P22309), 
UD11_MOUSE  (Q63886), UD11_RAT    (Q64550), UD12_MOUSE  (P70691), 
UD12_RAT    (P20720), UD13_HUMAN  (P35503), UD13_RAT    (Q64637), 
UD14_HUMAN  (P22310), UD14_RABIT  (Q28612), UD15_HUMAN  (P35504), 
UD15_RAT    (Q64638), UD16_HUMAN  (P19224), UD16_MOUSE  (Q64435), 
UD16_RABIT  (Q28611), UD16_RAT    (P08430), UD17C_MOUSE (Q6ZQM8), 
UD17_HUMAN  (Q9HAW7), UD17_RAT    (Q64633), UD18_HUMAN  (Q9HAW9), 
UD18_RAT    (Q64634), UD19_HUMAN  (O60656), UD19_MOUSE  (Q62452), 
UD2A1_HUMAN (Q9Y4X1), UD2A1_MOUSE (Q80X89), UD2A1_RAT   (P36510), 
UD2A2_MOUSE (Q6PDD0), UD2A3_CAVPO (Q9R110), UD2A3_HUMAN (Q6UWM9), 
UD2A3_MOUSE (Q8BWQ1), UD2A3_PONAB (Q5RFJ3), UD2B1_RAT   (P09875), 
UD2B2_RAT   (P08541), UD2B4_HUMAN (P06133), UD2B7_HUMAN (P16662), 
UD2B7_RAT   (Q62789), UD2B9_MACFA (O02663), UD2C1_RABIT (P36514), 
UD3A1_BOVIN (Q1LZI1), UD3A1_HUMAN (Q6NUS8), UD3A1_MOUSE (Q3UP75), 
UD3A1_XENLA (Q63ZR6), UD3A2_HUMAN (Q3SY77), UD3A2_MOUSE (Q8JZZ0), 
UDB10_HUMAN (P36537), UDB11_HUMAN (O75310), UDB13_RABIT (P36512), 
UDB14_RABIT (P36513), UDB15_HUMAN (P54855), UDB15_RAT   (P36511), 
UDB16_RABIT (O19103), UDB17_HUMAN (O75795), UDB17_MOUSE (P17717), 
UDB17_RAT   (P08542), UDB18_MACFA (O97951), UDB19_MACFA (Q9XT55), 
UDB20_MACFA (O77649), UDB23_MACFA (Q9TSL6), UDB28_HUMAN (Q9BY64), 
UDB30_MACFA (Q8WN97), UDB31_CANFA (Q6K1J1), UDB33_MACMU (Q9GLD9), 
UDB37_RAT   (P19488), UDPE_GVLO   (Q98166), UDPE_NPVAC  (P18569), 
UDPE_NPVCD  (Q90158), UDPE_NPVCF  (Q90157), UDPE_NPVLD  (P41713), 
UDPE_NPVMB  (Q83140), UDPE_NPVOP  (Q65363), UDPE_NPVSL  (Q88168), 
UFOG1_FRAAN (Q66PF5), UFOG1_MAIZE (P16166), UFOG1_MANES (Q40284), 
UFOG2_FRAAN (Q5UL10), UFOG2_MAIZE (P16165), UFOG2_MANES (Q40285), 
UFOG3_FRAAN (Q66PF3), UFOG3_MAIZE (P16167), UFOG4_MANES (Q40286), 
UFOG5_MANES (Q40287), UFOG6_FRAAN (Q2V6K0), UFOG6_MANES (Q40288), 
UFOG7_FRAAN (Q2V6J9), UFOG7_MANES (Q40289), UFOG_GENTR  (Q96493), 
UFOG_HORVU  (P14726), UFOG_PETHY  (Q43716), UFOG_SOLME  (Q43641), 
UFOG_VITVI  (P51094), UGAT_BELPE  (Q5NTH0), UGT3_PLEPL  (Q91280), 
UGT46_CAEEL (Q10941), UGT48_CAEEL (Q18081), UGT50_CAEEL (Q22295), 
UGT55_CAEEL (Q22180), UGT56_CAEEL (Q22181), UGT58_CAEEL (Q20086), 
UGT60_CAEEL (P34317), UGT_FRAAN   (Q2V6K1), URT1_FRAAN  (Q66PF2), 
ZOG_PHALU   (Q9ZSK5), ZOX_PHAVU   (P56725)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ANGT_GENTR  (Q8H0F2), BX9_MAIZE   (B4G072), HMNGT_SORBI (Q9SBL1), 
KGLT_PETHY  (Q9SBQ8), U74D1_ARATH (Q9SKC5), U76C1_ARATH (Q9FI99), 
U76C2_ARATH (Q9FIA0), U76C3_ARATH (Q9FI96), U76C4_ARATH (Q9FI98), 
U76C5_ARATH (Q9FI97), U76D1_ARATH (O48715), U76E1_ARATH (Q9LTH3), 
U76E2_ARATH (Q9LTH2), U76E3_ARATH (Q494Q1), U76E4_ARATH (Q9STE3), 
U76E5_ARATH (Q9STE6), U76E6_ARATH (Q9SNB0), U76E7_ARATH (Q9LS16), 
U76E9_ARATH (Q9LS21), U76F1_ARATH (Q9M052), U76F2_ARATH (Q9M051), 
U78D1_ARATH (Q9S9P6), U79B4_ARATH (Q9LJA6), U79B5_ARATH (Q9LPS8), 
U79B7_ARATH (Q9M0P3), U79B8_ARATH (O81010), U7B11_ARATH (Q9XIQ4), 
U7E11_ARATH (Q9SNB1), U7E12_ARATH (Q94AB5), U83A1_ARATH (Q9SGA8), 
U87A1_ARATH (O64732), U87A2_ARATH (O64733), U89A2_ARATH (Q9LZD8), 
U89B1_ARATH (Q9C9B0), U89C1_ARATH (Q9LNE6), U91A1_ARATH (Q940V3), 
U91C1_ARATH (Q9LTA3), YDHE_BACSU  (O05496), YJIC_BACSU  (O34539), 
YOJK_BACSU  (O31853)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
UFOG1_TAXBA (P85358)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		2C1X; 2C1Z; 2C9Z; 2IYF; 2VCE; 2VCH; 2VG8;

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