Entry: PS00439

General information about the entry
Entry name ACYLTRANSF_C_1
Accession number PS00439
Entry type PATTERN
Date MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00402
Name and characterization of the entry
DescriptionAcyltransferases ChoActase / COT / CPT family signature 1.
Pattern [LI]-[PK]-x-[LVPQ]-P-[IVTAL]-P-x-[LIVMA]-x-[DENQAS]-[ST]-[LIVMA]-x(2)- [LY].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 38 hits in 38 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 38 hits in 38 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 3
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 92.68 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CACM_YEAST  (P80235), CACP_CANTR  (Q00614), CACP_COLLI  (P52826), 
CACP_HUMAN  (P43155), CACP_MOUSE  (P47934), CACP_RAT    (Q704S8), 
CACP_YEAST  (P32796), CLAT_CAEEL  (P32756), CLAT_DANRE  (B2ZGJ1), 
CLAT_DROME  (P07668), CLAT_HUMAN  (P28329), CLAT_MOUSE  (Q03059), 
CLAT_PIG    (P13222), CLAT_RAT    (P32738), CPT1A_HORSE (Q68Y62), 
CPT1A_HUMAN (P50416), CPT1A_MOUSE (P97742), CPT1A_RAT   (P32198), 
CPT1B_BOVIN (Q58DK1), CPT1B_HUMAN (Q92523), CPT1B_MOUSE (Q924X2), 
CPT1B_PIG   (Q8HY46), CPT1B_RAT   (Q63704), CPT1C_HUMAN (Q8TCG5), 
CPT1C_MOUSE (Q8BGD5), CPT1C_RAT   (F1LN46), CPT2_BOVIN  (Q2KJB7), 
CPT2_DANRE  (Q5U3U3), CPT2_HUMAN  (P23786), CPT2_MACFA  (Q60HG9), 
CPT2_MOUSE  (P52825), CPT2_RAT    (P18886), CPT2_XENTR  (Q6P4X5), 
OCTC_BOVIN  (O19094), OCTC_HUMAN  (Q9UKG9), OCTC_MOUSE  (Q9DC50), 
OCTC_RAT    (P11466), YAT2_YEAST  (P40017)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CLAT_CHICK  (Q90YJ9), CPT2_XENLA  (Q7ZXE1), Y114_MYCPN  (P75448)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1NDB; 1NDF; 1NDI; 1NM8; 1Q6X; 1S5O; 1T1U; 1T7N; 1T7O; 1T7Q; 1XL7; 1XL8; 1XMC; 1XMD; 2FW3; 2FY2; 2FY3; 2FY4; 2FY5; 2H3P; 2H3U; 2H3W; 2H4T; 2RCU;

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