Entry: PS00489

General information about the entry
Entry name RNA_POL_PHAGE_2
Accession number PS00489
Entry type PATTERN
Date MAY-1991 (CREATED); OCT-1993 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00410
Associated ProRule PRU10032
Name and characterization of the entry
DescriptionBacteriophage-type RNA polymerase family active site signature 2.
Pattern [LIVMF]-x-R-x(3)-K-x(2)-[LIVMF]-M-[PT]-x(2)-Y.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 27 hits in 27 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 27 hits in 27 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Bacteriophages, Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 5,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RPO1B_TOBAC (Q8L6J5), RPO2A_TOBAC (Q8L6J2), RPO2B_TOBAC (Q8L6J3), 
RPO3A_TOBAC (P69243), RPO3B_TOBAC (Q8L6J1), RPOL_BPK11  (P18147), 
RPOL_BPSP6  (P06221), RPOL_BPT3   (P07659), RPOL_BPT7   (P00573), 
RPOM_HUMAN  (O00411), RPOM_MOUSE  (Q8BKF1), RPOM_NEUCR  (P38671), 
RPOM_SCHPO  (O13993), RPOM_YEAST  (P13433), RPOP_AGABT  (P33539), 
RPOP_CLAPU  (P22372), RPOP_GELSP  (O03685), RPOP_MAIZE  (P10581), 
RPOP_NEUCS  (P33540), RPOP_NEUIN  (P33541), RPOP_PODAS  (Q01521), 
RPOT1_ARATH (P92969), RPOT1_NICSY (Q93Y94), RPOT2_ARATH (Q9LFV6), 
RPOT2_NICSY (Q8VWF8), RPOT3_ARATH (O24600), RPOT3_NICSY (P69242)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1ARO; 1CEZ; 1H38; 1MSW; 1QLN; 1S0V; 1S76; 1S77; 2PI4; 2PI5; 3E2E; 3E3J; 3SPA;

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