Entry: PS00521

General information about the entry
Entry name P5CR
Accession number PS00521
Entry type PATTERN
Date DEC-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00451
Name and characterization of the entry
DescriptionDelta 1-pyrroline-5-carboxylate reductase signature.
Pattern [PALF]-x(2,3)-[LIV]-x(3)-[LIVM]-[STAC]-[STV]-x-[GANK]-G-x-T-x(2)-[AG]- [LIV]-x(2)-[LMF]-[DENQK].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 46 hits in 46 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 46 hits in 46 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 6
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 88.46 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
COMER_BACSU (P39696), P5CR1_ARATH (P54904), P5CR1_BACPZ (E0TY11), 
P5CR1_BACSU (P0CI77), P5CR1_BOVIN (Q58DT4), P5CR1_HUMAN (P32322), 
P5CR1_MOUSE (Q922W5), P5CR1_PONAB (Q5R9X6), P5CR2_BACSU (P54552), 
P5CR2_BOVIN (Q17QJ7), P5CR2_HUMAN (Q96C36), P5CR2_MACFA (Q4R6W7), 
P5CR2_MOUSE (Q922Q4), P5CR2_PONAB (Q5RAQ3), P5CR2_RAT   (Q6AY23), 
P5CR3_BOVIN (Q58D08), P5CR3_DANRE (Q5SPD7), P5CR3_HUMAN (Q53H96), 
P5CR3_MACFA (Q4R531), P5CR3_XENLA (A1L2Q8), P5CR_ACTCH  (O04016), 
P5CR_AQUAE  (O66553), P5CR_CAEEL  (Q20848), P5CR_CORGL  (P0C1E4), 
P5CR_CORML  (P0C1E5), P5CR_ECOLI  (P0A9L8), P5CR_HAEIN  (P43869), 
P5CR_HELPJ  (Q9ZK56), P5CR_HELPY  (O25773), P5CR_METAC  (Q9HH99), 
P5CR_METSM  (P22350), P5CR_MYCLE  (P46725), P5CR_MYCTU  (Q11141), 
P5CR_NEUCR  (Q12641), P5CR_PASMU  (Q9CPE8), P5CR_PEA    (Q04708), 
P5CR_PSEAE  (P22008), P5CR_SCHPO  (Q9P7Y7), P5CR_SHIFL  (P0A9L9), 
P5CR_SOYBN  (P17817), P5CR_SYNY3  (P74572), P5CR_THET2  (P54893), 
P5CR_TREPA  (P27771), P5CR_VIBAL  (P52053), P5CR_YEAST  (P32263), 
P5CR_ZALAR  (Q12740)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
NXRD1_HUMAN (Q6NXP6), NXRD1_MOUSE (Q9D3S5), NXRD1_XENTR (A0JM24), 
P5CR3_BACSU (Q00777), P5CR3_MOUSE (Q9DCC4), P5CR3_RAT   (Q5PQJ6)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 2GER; 2GR9; 2GRA; 2IZZ;

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