Entry: PS00522

General information about the entry

Entry name [info] DNA_POLYMERASE_X
Accession [info] PS00522
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); NOV-1995 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00452

Name and characterization of the entry

Description [info] DNA polymerase family X signature.
Pattern [info]
G-[SG]-[LFY]-x-R-[GE]-x(3)-[SGCL]-x-D-[LIVM]-D-[LIVMFY](3)-x(2)-[SAP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] primer_binding at position 5
Site [info] primer_binding at position 10
Site [info] primer_binding at position 12
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

DPO4_SCHPO  (Q09693), DPO4_YEAST  (P25615), DPOLB_BOVIN (Q27958), 
DPOLB_DANRE (Q6DRD3), DPOLB_HUMAN (P06746), DPOLB_MOUSE (Q8K409), 
DPOLB_RAT   (P06766), DPOLB_XENLA (O57383), DPOLL_HUMAN (Q9UGP5), 
DPOLL_MACFA (Q4R380), DPOLL_MOUSE (Q9QXE2), DPOLL_RAT   (Q5RKI3), 
DPOLM_HUMAN (Q9NP87), DPOLM_MOUSE (Q9JIW4), DPOLX_ASFB7 (P42494), 
DPOLX_ASFK5 (P0C986), DPOLX_ASFM2 (P0C984), DPOLX_ASFP4 (P0C983), 
DPOLX_ASFWA (P0C985), DPOLX_MIMIV (Q7T6Y4), TDT_AMBME   (O57486), 
TDT_BOVIN   (P06526), TDT_CHICK   (P36195), TDT_EULMA   (A4PCD4), 
TDT_HUMAN   (P04053), TDT_MONDO   (O02789), TDT_MOUSE   (P09838), 
TDT_ONCMY   (Q92089), TDT_XENLA   (P42118)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

POLX_BACSU  (P94544)

		
PDB
[Detailed view]
316 PDB

1BPB; 1BPD; 1BPE; 1BPX; 1BPY; 1BPZ; 1HUO; 1HUZ; 1JAJ; 1JMS; 1JN3; 1JQR; 1KDH; 1KEJ; 1MQ2; 1MQ3; 1NOM; 1RPL; 1RZT; 1TV9; 1TVA; 1XSL; 1XSN; 1XSP; 1ZJM; 1ZJN; 1ZQA; 1ZQB; 1ZQC; 1ZQD; 1ZQE; 1ZQF; 1ZQG; 1ZQH; 1ZQI; 1ZQJ; 1ZQK; 1ZQL; 1ZQM; 1ZQN; 1ZQO; 1ZQP; 1ZQQ; 1ZQR; 1ZQS; 1ZQT; 1ZQU; 1ZQV; 1ZQW; 1ZQX; 1ZQY; 1ZQZ; 2BCQ; 2BCR; 2BCS; 2BCU; 2BCV; 2BPC; 2BPF; 2BPG; 2FMP; 2FMQ; 2FMS; 2GWS; 2I9G; 2IHM; 2ISO; 2ISP; 2M2T; 2M2U; 2M2V; 2M2W; 2P66; 2PFN; 2PFO; 2PFP; 2PFQ; 2PXI; 2VAN; 3C2K; 3C2L; 3C2M; 3C5F; 3C5G; 3GDX; 3HW8; 3HWT; 3HX0; 3ISB; 3ISC; 3ISD; 3JPN; 3JPO; 3JPP; 3JPQ; 3JPR; 3JPS; 3JPT; 3K75; 3LK9; 3LQC; 3MBY; 3MDA; 3MDC; 3MGH; 3MGI; 3OGU; 3PML; 3PMN; 3PNC; 3RH4; 3RH5; 3RH6; 3RJE; 3RJF; 3RJG; 3RJH; 3RJI; 3RJJ; 3RJK; 3TFR; 3TFS; 3UPQ; 3UQ0; 3UQ2; 3UXN; 3UXO; 3UXP; 3V72; 3V7J; 3V7K; 3V7L; 4DO9; 4DOA; 4DOB; 4DOC; 4F5N; 4F5O; 4F5P; 4F5Q; 4F5R; 4FO6; 4GXI; 4GXJ; 4GXK; 4I27; 4I28; 4I29; 4I2A; 4I2B; 4I2C; 4I2D; 4I2E; 4I2F; 4I2G; 4I2H; 4I2I; 4I2J; 4IQT; 4IQU; 4IQV; 4IQW; 4JWM; 4JWN; 4K4G; 4K4H; 4K4I; 4KLD; 4KLE; 4KLF; 4KLG; 4KLH; 4KLI; 4KLJ; 4KLL; 4KLM; 4KLO; 4KLQ; 4KLS; 4KLT; 4KLU; 4LVS; 4LZD; 4LZG; 4M04; 4M0A; 4M2Y; 4M47; 4M9G; 4M9H; 4M9J; 4M9L; 4M9N; 4MF2; 4MF8; 4MFA; 4MFC; 4MFF; 4NLK; 4NLN; 4NLZ; 4NM1; 4NM2; 4NXZ; 4NY8; 4O5C; 4O5E; 4O5K; 4O9M; 4P2H; 4PGQ; 4PGX; 4PGY; 4PH5; 4PHA; 4PHD; 4PHE; 4PHP; 4PPX; 4R63; 4R64; 4R65; 4R66; 4RPX; 4RPY; 4RPZ; 4RQ0; 4RQ1; 4RQ2; 4RQ3; 4RQ4; 4RQ5; 4RQ6; 4RQ7; 4RQ8; 4TUP; 4TUQ; 4TUR; 4TUS; 4UAW; 4UAY; 4UAZ; 4UB1; 4UB2; 4UB3; 4UB4; 4UB5; 4UBB; 4UBC; 7ICE; 7ICF; 7ICG; 7ICH; 7ICI; 7ICJ; 7ICK; 7ICL; 7ICM; 7ICN; 7ICO; 7ICP; 7ICQ; 7ICR; 7ICS; 7ICT; 7ICU; 7ICV; 8ICA; 8ICB; 8ICC; 8ICE; 8ICF; 8ICG; 8ICH; 8ICI; 8ICJ; 8ICK; 8ICL; 8ICM; 8ICN; 8ICO; 8ICP; 8ICQ; 8ICR; 8ICS; 8ICT; 8ICU; 8ICV; 8ICW; 8ICX; 8ICY; 8ICZ; 9ICA; 9ICB; 9ICC; 9ICE; 9ICF; 9ICG; 9ICH; 9ICI; 9ICJ; 9ICK; 9ICL; 9ICM; 9ICN; 9ICO; 9ICP; 9ICQ; 9ICR; 9ICS; 9ICT; 9ICU; 9ICV; 9ICW; 9ICX; 9ICY
» More

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