Entry: PS00522

General information about the entry

Entry name [info] DNA_POLYMERASE_X
Accession [info] PS00522
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-NOV-1995 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00452

Name and characterization of the entry

Description [info] DNA polymerase family X signature.
Pattern [info] 
G-[SG]-[LFY]-x-R-[GE]-x(3)-[SGCL]-x-D-[LIVM]-D-[LIVMFY](3)-x(2)-[SAP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 31 in 31 different sequences
Number of true positive hits 31 in 31 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.88 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] primer_binding at position 5
Site [info] primer_binding at position 10
Site [info] primer_binding at position 12
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 31 sequences 

DPO4_SCHPO  (Q09693    ), DPO4_YEAST  (P25615    ), DPOLB_BOVIN (Q27958    ), 

DPOLB_DANRE (Q6DRD3    ), DPOLB_HUMAN (P06746    ), DPOLB_MOUSE (Q8K409    ), 
DPOLB_RAT   (P06766    ), DPOLB_XENLA (O57383    ), DPOLL_ARATH (Q9FNY4    ), 
DPOLL_HUMAN (Q9UGP5    ), DPOLL_MACFA (Q4R380    ), DPOLL_MOUSE (Q9QXE2    ), 
DPOLL_ORYSJ (Q67VC8    ), DPOLL_RAT   (Q5RKI3    ), DPOLM_HUMAN (Q9NP87    ), 
DPOLM_MOUSE (Q9JIW4    ), DPOLX_ASFB7 (P42494    ), DPOLX_ASFK5 (P0C986    ), 
DPOLX_ASFM2 (P0C984    ), DPOLX_ASFP4 (P0C983    ), DPOLX_ASFWA (P0C985    ), 
DPOLX_MIMIV (Q7T6Y4    ), TDT_AMBME   (O57486    ), TDT_BOVIN   (P06526    ), 
TDT_CHICK   (P36195    ), TDT_EULMA   (A4PCD4    ), TDT_HUMAN   (P04053    ), 
TDT_MONDO   (O02789    ), TDT_MOUSE   (P09838    ), TDT_ONCMY   (Q92089    ), 
TDT_XENLA   (P42118    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

POLX_BACSU  (P94544    )


				
	

	

		PDB
[Detailed view]		
		
			392 PDB
			


			1BPB; 1BPD; 1BPE; 1BPX; 1BPY; 1BPZ; 1HUO; 1HUZ; 1JAJ; 1JMS; 1JN3; 1JQR; 
			
				1KDH; 1KEJ; 1MQ2; 1MQ3; 1NOM; 1RPL; 1RZT; 1TV9; 1TVA; 1XSL; 1XSN; 1XSP; 
				1ZJM; 1ZJN; 1ZQA; 1ZQB; 1ZQC; 1ZQD; 1ZQE; 1ZQF; 1ZQG; 1ZQH; 1ZQI; 1ZQJ; 
				1ZQK; 1ZQL; 1ZQM; 1ZQN; 1ZQO; 1ZQP; 1ZQQ; 1ZQR; 1ZQS; 1ZQT; 1ZQU; 1ZQV; 
				1ZQW; 1ZQX; 1ZQY; 1ZQZ; 2BCQ; 2BCR; 2BCS; 2BCU; 2BCV; 2BPC; 2BPF; 2BPG; 
				2FMP; 2FMQ; 2FMS; 2GWS; 2I9G; 2IHM; 2ISO; 2ISP; 2M2T; 2M2U; 2M2V; 2M2W; 
				2P66; 2PFN; 2PFO; 2PFP; 2PFQ; 2PXI; 2VAN; 3C2K; 3C2L; 3C2M; 3C5F; 3C5G; 
				3GDX; 3HW8; 3HWT; 3HX0; 3ISB; 3ISC; 3ISD; 3JPN; 3JPO; 3JPP; 3JPQ; 3JPR; 
				3JPS; 3JPT; 3K75; 3LK9; 3LQC; 3MBY; 3MDA; 3MDC; 3MGH; 3MGI; 3OGU; 3PML; 
				3PMN; 3PNC; 3RH4; 3RH5; 3RH6; 3RJE; 3RJF; 3RJG; 3RJH; 3RJI; 3RJJ; 3RJK; 
				3TFR; 3TFS; 3UPQ; 3UQ0; 3UQ2; 3UXN; 3UXO; 3UXP; 3V72; 3V7J; 3V7K; 3V7L; 
				4DO9; 4DOA; 4DOB; 4DOC; 4F5N; 4F5O; 4F5P; 4F5Q; 4F5R; 4FO6; 4GXI; 4GXJ; 
				4GXK; 4I27; 4I28; 4I29; 4I2A; 4I2B; 4I2C; 4I2D; 4I2E; 4I2F; 4I2G; 4I2H; 
				4I2I; 4I2J; 4IQT; 4IQU; 4IQV; 4IQW; 4JWM; 4JWN; 4K4G; 4K4H; 4K4I; 4KLD; 
				4KLE; 4KLF; 4KLG; 4KLH; 4KLI; 4KLJ; 4KLL; 4KLM; 4KLO; 4KLQ; 4KLS; 4KLT; 
				4KLU; 4LVS; 4LZD; 4LZG; 4M04; 4M0A; 4M2Y; 4M47; 4M9G; 4M9H; 4M9J; 4M9L; 
				4M9N; 4MF2; 4MF8; 4MFA; 4MFC; 4MFF; 4NLK; 4NLN; 4NLZ; 4NM1; 4NM2; 4NXZ; 
				4NY8; 4O5C; 4O5E; 4O5K; 4O9M; 4P2H; 4PGQ; 4PGX; 4PGY; 4PH5; 4PHA; 4PHD; 
				4PHE; 4PHP; 4PPX; 4QZ8; 4QZ9; 4QZA; 4QZB; 4QZC; 4QZD; 4QZE; 4QZF; 4QZG; 
				4QZH; 4QZI; 4R63; 4R64; 4R65; 4R66; 4RPX; 4RPY; 4RPZ; 4RQ0; 4RQ1; 4RQ2; 
				4RQ3; 4RQ4; 4RQ5; 4RQ6; 4RQ7; 4RQ8; 4RT2; 4RT3; 4TUP; 4TUQ; 4TUR; 4TUS; 
				4UAW; 4UAY; 4UAZ; 4UB1; 4UB2; 4UB3; 4UB4; 4UB5; 4UBB; 4UBC; 4X5V; 4XA5; 
				4XQ8; 4XRH; 4XUS; 4YCX; 4YD1; 4YD2; 4YMM; 4YMN; 4YMO; 4YN4; 4Z6C; 4Z6D; 
				4Z6E; 4Z6F; 5BOL; 5BOM; 5BPC; 5CA7; 5CB1; 5D46; 5D49; 5D4B; 5DB6; 5DB7; 
				5DB8; 5DB9; 5DBA; 5DBB; 5DBC; 5DDM; 5DDY; 5DKW; 5III; 5IIJ; 5IIK; 5IIL; 
				5IIM; 5IIN; 5IIO; 5J0O; 5J0P; 5J0Q; 5J0R; 5J0S; 5J0T; 5J0U; 5J0W; 5J0X; 
				5J0Y; 5J29; 5J2A; 5J2B; 5J2C; 5J2D; 5J2E; 5J2F; 5J2G; 5J2H; 5J2I; 5J2J; 
				5J2K; 7ICE; 7ICF; 7ICG; 7ICH; 7ICI; 7ICJ; 7ICK; 7ICL; 7ICM; 7ICN; 7ICO; 
				7ICP; 7ICQ; 7ICR; 7ICS; 7ICT; 7ICU; 7ICV; 8ICA; 8ICB; 8ICC; 8ICE; 8ICF; 
				8ICG; 8ICH; 8ICI; 8ICJ; 8ICK; 8ICL; 8ICM; 8ICN; 8ICO; 8ICP; 8ICQ; 8ICR; 
				8ICS; 8ICT; 8ICU; 8ICV; 8ICW; 8ICX; 8ICY; 8ICZ; 9ICA; 9ICB; 9ICC; 9ICE; 
				9ICF; 9ICG; 9ICH; 9ICI; 9ICJ; 9ICK; 9ICL; 9ICM; 9ICN; 9ICO; 9ICP; 9ICQ; 
				9ICR; 9ICS; 9ICT; 9ICU; 9ICV; 9ICW; 9ICX; 9ICY
			
			

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