Entry: PS00526

General information about the entry
Entry name RIBOSOMAL_L19E
Accession number PS00526
Entry type PATTERN
Date DEC-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00455
Name and characterization of the entry
DescriptionRibosomal protein L19e signature.
Pattern Q-[KR]-R-[LIVM]-x-[SA]-x(4)-[CV]-G-x(3)-[IV]-[WK]-[LIVF]-[DNSV]-[PE].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 31 hits in 31 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 31 hits in 31 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 86.11 %
Comments
  • Taxonomic range: Archaea, Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RL191_ARATH (Q9SRX2), RL192_ARATH (Q9LUQ6), RL193_ARATH (P49693), 
RL19A_YEAST (P0CX82), RL19B_YEAST (P0CX83), RL19E_AERPE (Q9YF93), 
RL19E_ARCFU (O28372), RL19E_HALMA (P14119), RL19E_HALSA (Q9HPB6), 
RL19E_METJA (P54043), RL19E_METTH (O26129), RL19E_METVA (P14024), 
RL19E_PYRAB (Q9V1V3), RL19E_PYRFU (Q8U016), RL19E_PYRHO (O59437), 
RL19E_SULAC (O05639), RL19E_SULSO (Q9UX89), RL19_BOVIN  (Q3T0W9), 
RL19_CAEEL  (O02639), RL19_CANFA  (D0VWQ5), RL19_DANRE  (Q6P5L3), 
RL19_DICDI  (P14329), RL19_DROME  (P36241), RL19_HUMAN  (P84098), 
RL19_ICTPU  (Q90YU8), RL19_MACFA  (Q8HXN9), RL19_MAIZE  (Q08066), 
RL19_MOUSE  (P84099), RL19_PONAB  (Q5RB99), RL19_RAT    (P84100), 
RL19_XENLA  (Q7ZYS1)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
RL19A_SCHPO (P05734), RL19B_SCHPO (O42699), RL19E_KORCO (B1L784), 
RL19E_NATPD (Q3IMX0), RL19_TETTS  (P0DJ60)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1FFK; 1JJ2; 1K5Y; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S1I; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 2WW9; 2WWA; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3IZS; 3J21; 3O58; 3O5H; 3OW2; 3U5E; 3U5I; 4B6A;

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