Entry: PS00528

General information about the entry

Entry name [info] RIBOSOMAL_S4E
Accession [info] PS00528
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); JUL-1999 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00457

Name and characterization of the entry

Description [info] Ribosomal protein S4e signature.
Pattern [info]
H-x-K-R-[LIVMF]-[SANK]-x-P-x(2)-[WY]-x-[LIVM]-x-[KRP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 72 in 72 different sequences
Number of true positive hits 72 in 72 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 30
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.59 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
72 sequences

RS41_ARATH  (Q93VH9    ), RS42_ARATH  (P49204    ), RS43_ARATH  (Q8VYK6    ), 
RS4A_SCHPO  (P87158    ), RS4A_YEAST  (P0CX35    ), RS4B_SCHPO  (Q9USW5    ), 
RS4B_YEAST  (P0CX36    ), RS4C_SCHPO  (Q9P4W9    ), RS4E_ARCFU  (O28366    ), 
RS4E_HALLT  (B9LSR5    ), RS4E_HALMA  (P22510    ), RS4E_HALS3  (B0R668    ), 
RS4E_HALSA  (Q9HPC2    ), RS4E_IGNH4  (A8ACD4    ), RS4E_METAC  (Q8TRT5    ), 
RS4E_METAR  (Q0W1X6    ), RS4E_METJA  (P54039    ), RS4E_METKA  (Q8TW18    ), 
RS4E_METM5  (A4FWA9    ), RS4E_METM6  (A9A9Q2    ), RS4E_METM7  (A6VGZ7    ), 
RS4E_METMA  (Q8PV38    ), RS4E_METMP  (P62428    ), RS4E_METST  (Q2NFW9    ), 
RS4E_METTH  (O26123    ), RS4E_METVA  (P14023    ), RS4E_METVS  (A6UQ56    ), 
RS4E_NATPD  (Q3IMX6    ), RS4E_PYRAB  (Q9V1U8    ), RS4E_PYRFU  (Q8U011    ), 
RS4E_PYRHO  (O59430    ), RS4E_THEKO  (Q5JJG0    ), RS4X_CHLAE  (Q76N24    ), 
RS4X_DANRE  (Q642H9    ), RS4X_FELCA  (P62705    ), RS4X_HUMAN  (P62701    ), 
RS4X_MACFU  (Q76MY1    ), RS4X_MESAU  (P62704    ), RS4X_MONDO  (O62738    ), 
RS4X_MOUSE  (P62702    ), RS4X_RAT    (P62703    ), RS4Y1_GORGO (Q861U8    ), 
RS4Y1_HUMAN (P22090    ), RS4Y1_MACFU (P79183    ), RS4Y1_MONDO (O62739    ), 
RS4Y1_PANPA (Q861V0    ), RS4Y1_PANTR (Q861U9    ), RS4Y1_PONPY (Q861U7    ), 
RS4Y2_HUMAN (Q8TD47    ), RS4Y2_PANTR (Q6GVM7    ), RS4_BOMMO   (Q5UAP0    ), 
RS4_BOVIN   (P79103    ), RS4_CAEEL   (Q9N3X2    ), RS4_CANAX   (P47837    ), 
RS4_CARGR   (Q4GXU6    ), RS4_CHICK   (P47836    ), RS4_CRIGR   (P47961    ), 
RS4_DICDI   (P51405    ), RS4_DROME   (P41042    ), RS4_GOSHI   (P46299    ), 
RS4_ICTPU   (Q90YS0    ), RS4_IXOSC   (Q4PMB3    ), RS4_LYSTE   (Q56FH2    ), 
RS4_MAIZE   (O22424    ), RS4_ORYSJ   (P49398    ), RS4_PRUAR   (O81363    ), 
RS4_SOLTU   (P46300    ), RS4_SPOFR   (Q95V34    ), RS4_TETTH   (P0C233    ), 
RS4_XENLA   (P49401    ), RS4_XENTR   (Q6PBC4    ), RS4_YARLI   (O59950    )
» more

UniProtKB/Swiss-Prot
False negative sequences
30 sequences

RS4E_AERPE  (Q9YF85    ), RS4E_CALMQ  (A8MB20    ), RS4E_DESK1  (B8D5V8    ), 
RS4E_HYPBU  (A2BMD1    ), RS4E_KORCO  (B1L778    ), RS4E_META3  (A6UWV0    ), 
RS4E_METBF  (Q46GA7    ), RS4E_METHJ  (Q2FT37    ), RS4E_METS3  (A5UL76    ), 
RS4E_METS5  (A4YCX8    ), RS4E_NANEQ  (P62429    ), RS4E_PICTO  (Q6L1B5    ), 
RS4E_PYRAE  (Q8ZTD3    ), RS4E_PYRAR  (A4WLL4    ), RS4E_PYRCJ  (A3MWZ7    ), 
RS4E_PYRIL  (A1RS06    ), RS4E_PYRNV  (B1Y9S4    ), RS4E_STAMF  (A3DNB9    ), 
RS4E_SULAC  (O05634    ), RS4E_SULIA  (C3N5T9    ), RS4E_SULIK  (C4KHG8    ), 
RS4E_SULIL  (C3MQ71    ), RS4E_SULIM  (C3MVJ0    ), RS4E_SULIN  (C3NH97    ), 
RS4E_SULIY  (C3NEF5    ), RS4E_SULSO  (Q9UX94    ), RS4E_SULTO  (Q975J2    ), 
RS4E_THEAC  (Q56230    ), RS4E_THEVO  (Q97BW4    ), RS4_BIGNA   (Q40941    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

RS4_HORSE   (P55832    )

		
PDB
[Detailed view]
2 PDB

5A2Q; 5FLX

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