Entry: PS00528

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General information about the entry

Entry name [info] RIBOSOMAL_S4E
Accession [info] PS00528
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); JUL-1999 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00457

Name and characterization of the entry

Description [info] Ribosomal protein S4e signature.
Pattern [info]
H-x-K-R-[LIVMF]-[SANK]-x-P-x(2)-[WY]-x-[LIVM]-x-[KRP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 72 in 72 different sequences
Number of true positive hits 72 in 72 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 30
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.59 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
72 sequences

RS41_ARATH  (Q93VH9), RS42_ARATH  (P49204), RS43_ARATH  (Q8VYK6), 
RS4A_SCHPO  (P87158), RS4A_YEAST  (P0CX35), RS4B_SCHPO  (Q9USW5), 
RS4B_YEAST  (P0CX36), RS4C_SCHPO  (Q9P4W9), RS4E_ARCFU  (O28366), 
RS4E_HALLT  (B9LSR5), RS4E_HALMA  (P22510), RS4E_HALS3  (B0R668), 
RS4E_HALSA  (Q9HPC2), RS4E_IGNH4  (A8ACD4), RS4E_METAC  (Q8TRT5), 
RS4E_METJA  (P54039), RS4E_METKA  (Q8TW18), RS4E_METM5  (A4FWA9), 
RS4E_METM6  (A9A9Q2), RS4E_METM7  (A6VGZ7), RS4E_METMA  (Q8PV38), 
RS4E_METMP  (P62428), RS4E_METST  (Q2NFW9), RS4E_METTH  (O26123), 
RS4E_METVA  (P14023), RS4E_METVS  (A6UQ56), RS4E_NATPD  (Q3IMX6), 
RS4E_PYRAB  (Q9V1U8), RS4E_PYRFU  (Q8U011), RS4E_PYRHO  (O59430), 
RS4E_THEKO  (Q5JJG0), RS4E_UNCMA  (Q0W1X6), RS4X_CHLAE  (Q76N24), 
RS4X_DANRE  (Q642H9), RS4X_FELCA  (P62705), RS4X_HUMAN  (P62701), 
RS4X_MACFU  (Q76MY1), RS4X_MESAU  (P62704), RS4X_MONDO  (O62738), 
RS4X_MOUSE  (P62702), RS4X_RAT    (P62703), RS4Y1_GORGO (Q861U8), 
RS4Y1_HUMAN (P22090), RS4Y1_MACFU (P79183), RS4Y1_MONDO (O62739), 
RS4Y1_PANPA (Q861V0), RS4Y1_PANTR (Q861U9), RS4Y1_PONPY (Q861U7), 
RS4Y2_HUMAN (Q8TD47), RS4Y2_PANTR (Q6GVM7), RS4_BOMMO   (Q5UAP0), 
RS4_BOVIN   (P79103), RS4_CAEEL   (Q9N3X2), RS4_CANAX   (P47837), 
RS4_CARGR   (Q4GXU6), RS4_CHICK   (P47836), RS4_CRIGR   (P47961), 
RS4_DICDI   (P51405), RS4_DROME   (P41042), RS4_GOSHI   (P46299), 
RS4_ICTPU   (Q90YS0), RS4_IXOSC   (Q4PMB3), RS4_LYSTE   (Q56FH2), 
RS4_MAIZE   (O22424), RS4_ORYSJ   (P49398), RS4_PRUAR   (O81363), 
RS4_SOLTU   (P46300), RS4_SPOFR   (Q95V34), RS4_TETTH   (P0C233), 
RS4_XENLA   (P49401), RS4_XENTR   (Q6PBC4), RS4_YARLI   (O59950)
» More

UniProtKB/Swiss-Prot
False negative sequences
30 sequences

RS4E_AERPE  (Q9YF85), RS4E_CALMQ  (A8MB20), RS4E_DESK1  (B8D5V8), 
RS4E_HYPBU  (A2BMD1), RS4E_KORCO  (B1L778), RS4E_META3  (A6UWV0), 
RS4E_METBF  (Q46GA7), RS4E_METHJ  (Q2FT37), RS4E_METS3  (A5UL76), 
RS4E_METS5  (A4YCX8), RS4E_NANEQ  (P62429), RS4E_PICTO  (Q6L1B5), 
RS4E_PYRAE  (Q8ZTD3), RS4E_PYRAR  (A4WLL4), RS4E_PYRCJ  (A3MWZ7), 
RS4E_PYRIL  (A1RS06), RS4E_PYRNV  (B1Y9S4), RS4E_STAMF  (A3DNB9), 
RS4E_SULAC  (O05634), RS4E_SULIA  (C3N5T9), RS4E_SULIK  (C4KHG8), 
RS4E_SULIL  (C3MQ71), RS4E_SULIM  (C3MVJ0), RS4E_SULIN  (C3NH97), 
RS4E_SULIY  (C3NEF5), RS4E_SULSO  (Q9UX94), RS4E_SULTO  (Q975J2), 
RS4E_THEAC  (Q56230), RS4E_THEVO  (Q97BW4), RS4_BIGNA   (Q40941)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

RS4_HORSE   (P55832)

		
PDB
[Detailed view]
10 PDB

2XZM; 2XZN; 3J20; 3J38; 3J3A; 3U5C; 3U5G; 4BPE; 4BYL; 4BYT

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