 |
|
| Entry: PS00528 |
| General information about the entry | |
|---|---|
| Entry name | RIBOSOMAL_S4E |
| Accession number | PS00528 |
| Entry type | PATTERN |
| Date | DEC-1991 (CREATED); JUL-1999 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00457 |
| Name and characterization of the entry | |
| Description | Ribosomal protein S4e signature. |
| Pattern | H-x-K-R-[LIVMF]-[SANK]-x-P-x(2)-[WY]-x-[LIVM]-x-[KRP]. |
| Numerical results | |
|
|
| Comments | |
|
|
| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:RS41_ARATH (Q93VH9), RS42_ARATH (P49204), RS43_ARATH (Q8VYK6), RS4A_SCHPO (P87158), RS4A_YEAST (P0CX35), RS4B_SCHPO (Q9USW5), RS4B_YEAST (P0CX36), RS4C_SCHPO (Q9P4W9), RS4E_ARCFU (O28366), RS4E_HALLT (B9LSR5), RS4E_HALMA (P22510), RS4E_HALS3 (B0R668), RS4E_HALSA (Q9HPC2), RS4E_IGNH4 (A8ACD4), RS4E_METAC (Q8TRT5), RS4E_METJA (P54039), RS4E_METKA (Q8TW18), RS4E_METM5 (A4FWA9), RS4E_METM6 (A9A9Q2), RS4E_METM7 (A6VGZ7), RS4E_METMA (Q8PV38), RS4E_METMP (P62428), RS4E_METST (Q2NFW9), RS4E_METTH (O26123), RS4E_METVA (P14023), RS4E_METVS (A6UQ56), RS4E_NATPD (Q3IMX6), RS4E_PYRAB (Q9V1U8), RS4E_PYRFU (Q8U011), RS4E_PYRHO (O59430), RS4E_PYRKO (Q5JJG0), RS4E_UNCMA (Q0W1X6), RS4X_CHLAE (Q76N24), RS4X_DANRE (Q642H9), RS4X_FELCA (P62705), RS4X_HUMAN (P62701), RS4X_MACFU (Q76MY1), RS4X_MESAU (P62704), RS4X_MONDO (O62738), RS4X_MOUSE (P62702), RS4X_RAT (P62703), RS4Y1_GORGO (Q861U8), RS4Y1_HUMAN (P22090), RS4Y1_MACFU (P79183), RS4Y1_MONDO (O62739), RS4Y1_PANPA (Q861V0), RS4Y1_PANTR (Q861U9), RS4Y1_PONPY (Q861U7), RS4Y2_HUMAN (Q8TD47), RS4Y2_PANTR (Q6GVM7), RS4_BOMMO (Q5UAP0), RS4_BOVIN (P79103), RS4_CAEEL (Q9N3X2), RS4_CANAX (P47837), RS4_CARGR (Q4GXU6), RS4_CHICK (P47836), RS4_CRIGR (P47961), RS4_DICDI (P51405), RS4_DROME (P41042), RS4_GOSHI (P46299), RS4_ICTPU (Q90YS0), RS4_IXOSC (Q4PMB3), RS4_LYSTE (Q56FH2), RS4_MAIZE (O22424), RS4_ORYSJ (P49398), RS4_PRUAR (O81363), RS4_SOLTU (P46300), RS4_SPOFR (Q95V34), RS4_TETTH (P0C233), RS4_XENLA (P49401), RS4_XENTR (Q6PBC4), RS4_YARLI (O59950)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): RS4E_AERPE (Q9YF85), RS4E_CALMQ (A8MB20), RS4E_DESK1 (B8D5V8), RS4E_HYPBU (A2BMD1), RS4E_KORCO (B1L778), RS4E_META3 (A6UWV0), RS4E_METBF (Q46GA7), RS4E_METHJ (Q2FT37), RS4E_METS3 (A5UL76), RS4E_METS5 (A4YCX8), RS4E_NANEQ (P62429), RS4E_PICTO (Q6L1B5), RS4E_PYRAE (Q8ZTD3), RS4E_PYRAR (A4WLL4), RS4E_PYRCJ (A3MWZ7), RS4E_PYRIL (A1RS06), RS4E_PYRNV (B1Y9S4), RS4E_STAMF (A3DNB9), RS4E_SULAC (O05634), RS4E_SULIA (C3N5T9), RS4E_SULIK (C4KHG8), RS4E_SULIL (C3MQ71), RS4E_SULIM (C3MVJ0), RS4E_SULIN (C3NH97), RS4E_SULIY (C3NEF5), RS4E_SULSO (Q9UX94), RS4E_SULTO (Q975J2), RS4E_THEAC (Q56230), RS4E_THEVO (Q97BW4), RS4_BIGNA (Q40941)`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): RS4_HORSE (P55832)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
|
| PDB [Detailed view] |
2XZM; 2XZN; 3J20; 3U5C; 3U5G; |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)