Entry: PS00570

General information about the entry

Entry name [info] RING_HYDROXYL_ALPHA
Accession [info] PS00570
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-DEC-2004 DATA UPDATE; 18-JAN-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00493

Name and characterization of the entry

Description [info] Bacterial ring hydroxylating dioxygenases alpha-subunit signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_01 which contains 553'474 sequence entries.

Total number of hits 40 in 40 different sequences
Number of true positive hits 36 in 36 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.00 %
Recall (true positives / (true positives + false negatives)) 97.30 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron_sulfur at position 1
Site [info] iron_sulfur at position 3
Site [info] iron_sulfur at position 10
Site [info] iron_sulfur at position 13
Version [info] 1

Cross-references [info]

True positive sequences
36 sequences

ABSAA_ALCSP (Q9RBG5    ), ANDAC_BURCE (Q84BZ3    ), ANTDA_ACIAD (O85673    ), 
BEDC1_PSEPU (Q07944    ), BENA_ACIAD  (P07769    ), BNZA_PSEP1  (A5W4F2    ), 
BNZA_PSEPU  (P0C618    ), BPHA1_PSES1 (Q52438    ), BPHA1_RHOJR (Q53122    ), 
BPHA_BURXL  (P37333    ), BPHA_COMTE  (Q46372    ), BPHA_PSEPS  (Q52028    ), 
CBAA_COMTE  (Q44256    ), CBDA_BURCE  (Q51601    ), HCAE_ECO57  (P0ABR6    ), 
HCAE_ECOHS  (A8A344    ), HCAE_ECOLI  (P0ABR5    ), HCAE_SHIBS  (Q31XV2    ), 
HCAE_SHIF8  (Q0T1Y1    ), HCAE_SHIFL  (Q83K39    ), HCAE_SHISS  (Q3YZ15    ), 
NAGG_RALSP  (O52379    ), NDOB_PSEAI  (Q51494    ), NDOB_PSEFL  (O07824    ), 
NDOB_PSEPU  (P0A110    ), NDOB_PSEU8  (P0A111    ), NDOB_RALSP  (O52382    ), 
PHT3_PSEPU  (Q05183    ), POBA_PSEPS  (Q52185    ), TPDA1_COMSP (Q3C1E3    ), 
TPDA2_COMSP (Q3C1D5    ), VANA_PSES9  (P12609    ), VANA_PSEUH  (O05616    ), 
XYLX_PSEPU  (P23099    ), YEAW_ECO57  (P0ABR8    ), YEAW_ECOLI  (P0ABR7    )
» more

False negative sequences
1 sequence

HCAE_PHOLL  (Q7N4W0    )

False positive sequences
4 sequences

CAO_ARATH   (Q9MBA1    ), CAO_CHLRE   (Q9ZWM5    ), CAO_DUNSA   (Q9XJ38    ), 
CAO_ORYSJ   (Q8S7E1    )
» more

[Detailed view]
42 PDB

1EG9; 1NDO; 1O7G; 1O7H; 1O7M; 1O7N; 1O7P; 1O7W; 1ULI; 1ULJ; 1UUV; 1UUW; 2HMJ; 2HMK; 2HML; 2HMM; 2HMN; 2HMO; 2XR8; 2XRX; 2XSH; 2XSO; 2YFI; 2YFJ; 2YFL; 3EN1; 3EQQ; 3GZX; 3GZY; 4HJL; 4HKV; 4HM0; 4HM1; 4HM2; 4HM3; 4HM4; 4HM5; 4HM6; 4HM7; 4HM8; 5AEU; 5AEW
» more

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