Entry: PS00570

General information about the entry

Entry name [info] RING_HYDROXYL_ALPHA
Accession [info] PS00570
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00493

Name and characterization of the entry

Description [info] Bacterial ring hydroxylating dioxygenases alpha-subunit signature.
Pattern [info]
C-x-H-R-[GAR]-x(7,8)-[GEKVI]-[NERAQ]-x(4,5)-C-x-[FY]-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 40 in 40 different sequences
Number of true positive hits 36 in 36 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.00 %
Recall (true positives / (true positives + false negatives)) 97.30 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron_sulfur at position 1
Site [info] iron_sulfur at position 3
Site [info] iron_sulfur at position 10
Site [info] iron_sulfur at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
36 sequences

ABSAA_ALCSP (Q9RBG5), ANDAC_BURCE (Q84BZ3), ANTDA_ACIAD (O85673), 
BEDC1_PSEPU (Q07944), BENA_ACIAD  (P07769), BNZA_PSEP1  (A5W4F2), 
BNZA_PSEPU  (P0C618), BPHA1_PSES1 (Q52438), BPHA1_RHOJR (Q53122), 
BPHA_BURXL  (P37333), BPHA_COMTE  (Q46372), BPHA_PSEPS  (Q52028), 
CBAA_COMTE  (Q44256), CBDA_BURCE  (Q51601), HCAE_ECO57  (P0ABR6), 
HCAE_ECOHS  (A8A344), HCAE_ECOLI  (P0ABR5), HCAE_SHIBS  (Q31XV2), 
HCAE_SHIF8  (Q0T1Y1), HCAE_SHIFL  (Q83K39), HCAE_SHISS  (Q3YZ15), 
NAGG_RALSP  (O52379), NDOB_PSEAI  (Q51494), NDOB_PSEFL  (O07824), 
NDOB_PSEPU  (P0A110), NDOB_PSEU8  (P0A111), NDOB_RALSP  (O52382), 
PHT3_PSEPU  (Q05183), POBA_PSEPS  (Q52185), TPDA1_COMSP (Q3C1E3), 
TPDA2_COMSP (Q3C1D5), VANA_PSES9  (P12609), VANA_PSEUH  (O05616), 
XYLX_PSEPU  (P23099), YEAW_ECO57  (P0ABR8), YEAW_ECOLI  (P0ABR7)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

HCAE_PHOLL  (Q7N4W0)

		
UniProtKB/Swiss-Prot
False positive sequences
4 sequences

CAO_ARATH   (Q9MBA1), CAO_CHLRE   (Q9ZWM5), CAO_DUNSA   (Q9XJ38), 
CAO_ORYSJ   (Q8S7E1)
» More

PDB
[Detailed view]
40 PDB

1EG9; 1NDO; 1O7G; 1O7H; 1O7M; 1O7N; 1O7P; 1O7W; 1ULI; 1ULJ; 1UUV; 1UUW; 2HMJ; 2HMK; 2HML; 2HMM; 2HMN; 2HMO; 2XR8; 2XRX; 2XSH; 2XSO; 2YFI; 2YFJ; 2YFL; 3EN1; 3EQQ; 3GZX; 3GZY; 4HJL; 4HKV; 4HM0; 4HM1; 4HM2; 4HM3; 4HM4; 4HM5; 4HM6; 4HM7; 4HM8
» More

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