Entry: PS00570

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General information about the entry

Entry name [info] RING_HYDROXYL_ALPHA
Accession [info] PS00570
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00493

Name and characterization of the entry

Description [info] Bacterial ring hydroxylating dioxygenases alpha-subunit signature.
Pattern [info]
C-x-H-R-[GAR]-x(7,8)-[GEKVI]-[NERAQ]-x(4,5)-C-x-[FY]-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 38 in 38 different sequences
Number of true positive hits 34 in 34 different sequences
Number of 'unknown' hits
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 89.47 %
Recall (true positives / (true positives + false negatives)) 97.14 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron_sulfur at position 1
Site [info] iron_sulfur at position 3
Site [info] iron_sulfur at position 10
Site [info] iron_sulfur at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
34 sequences

ANDAC_BURCE (Q84BZ3), ANTDA_ACIAD (O85673), BEDC1_PSEPU (Q07944), 
BENA_ACIAD  (P07769), BNZA_PSEP1  (A5W4F2), BNZA_PSEPU  (P0C618), 
BPHA1_PSES1 (Q52438), BPHA_BURXL  (P37333), BPHA_COMTE  (Q46372), 
BPHA_PSEPS  (Q52028), CBAA_COMTE  (Q44256), CBDA_BURCE  (Q51601), 
HCAE_ECO57  (P0ABR6), HCAE_ECOHS  (A8A344), HCAE_ECOLI  (P0ABR5), 
HCAE_SHIBS  (Q31XV2), HCAE_SHIF8  (Q0T1Y1), HCAE_SHIFL  (Q83K39), 
HCAE_SHISS  (Q3YZ15), NAGG_RALSP  (O52379), NDOB_PSEAI  (Q51494), 
NDOB_PSEFL  (O07824), NDOB_PSEPU  (P0A110), NDOB_PSEU8  (P0A111), 
NDOB_RALSP  (O52382), PHT3_PSEPU  (Q05183), POBA_PSEPS  (Q52185), 
TPDA1_COMSP (Q3C1E3), TPDA2_COMSP (Q3C1D5), VANA_PSES9  (P12609), 
VANA_PSEUH  (O05616), XYLX_PSEPU  (P23099), YEAW_ECO57  (P0ABR8), 
YEAW_ECOLI  (P0ABR7)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

HCAE_PHOLL  (Q7N4W0)

		
UniProtKB/Swiss-Prot
False positive sequences
4 sequences

CAO_ARATH   (Q9MBA1), CAO_CHLRE   (Q9ZWM5), CAO_DUNSA   (Q9XJ38), 
CAO_ORYSJ   (Q8S7E1)
» More

PDB
[Detailed view]
38 PDB

1EG9; 1NDO; 1O7G; 1O7H; 1O7M; 1O7N; 1O7P; 1O7W; 1UUV; 1UUW; 2HMJ; 2HMK; 2HML; 2HMM; 2HMN; 2HMO; 2XR8; 2XRX; 2XSH; 2XSO; 2YFI; 2YFJ; 2YFL; 3EN1; 3EQQ; 3GZX; 3GZY; 4HJL; 4HKV; 4HM0; 4HM1; 4HM2; 4HM3; 4HM4; 4HM5; 4HM6; 4HM7; 4HM8
» More

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