Entry: PS00602

General information about the entry
Entry name ALDOLASE_CLASS_II_1
Accession number PS00602
Entry type PATTERN
Date DEC-1991 (CREATED); DEC-2001 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00523
Name and characterization of the entry
DescriptionFructose-bisphosphate aldolase class-II signature 1.
Pattern [FYVMT]-x(1,3)-[LIVMH]-[APNT]-[LIVM]-x(1,2)-[LIVM]-H-x-D-H-[GACH].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 113 hits in 112 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 111 hits in 110 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 2 hits in 2 different sequences
  • Number of known missed hits: 23
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 98.23 %
  • Recall (true hits / (true hits + false negatives)): 82.84 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ALF1_CUPNH  (Q59100), ALF1_PARBA  (Q96UH7), ALF1_RHOSH  (P27995), 
ALF2_CUPNH  (Q59101), ALF2_PARBA  (Q8J0N6), ALF2_RHOSH  (P29271), 
ALF2_SYNY3  (Q55664), ALF_ASPOR   (Q9HGY9), ALF_BACSU   (P13243), 
ALF_BORBU   (O51401), ALF_BUCAI   (P57526), ALF_BUCAP   (Q8K9B2), 
ALF_BUCBP   (Q89AB6), ALF_CAMJE   (Q0PAS0), ALF_CAMJJ   (A1VYV7), 
ALF_CANAL   (Q9URB4), ALF_CORGL   (P19537), ALF_ECO57   (P0AB72), 
ALF_ECOLI   (P0AB71), ALF_EDWI9   (O52402), ALF_GEOSE   (P94453), 
ALF_HAEIN   (P44429), ALF_HELPJ   (Q9ZMQ6), ALF_HELPY   (P56109), 
ALF_KLULA   (Q9C2U0), ALF_MYCBO   (P67476), ALF_MYCGE   (P47269), 
ALF_MYCLE   (O69600), ALF_MYCTU   (P67475), ALF_NEUCR   (P53444), 
ALF_NOSCO   (Q9XDP3), ALF_NOSS1   (Q8YNK2), ALF_PSEAE   (Q9I5Y1), 
ALF_PSEST   (O87796), ALF_RHIME   (P58336), ALF_SCHPO   (P36580), 
ALF_SHIFL   (P0AB73), ALF_SINMW   (P56888), ALF_STRCO   (Q9X8R6), 
ALF_STRGB   (Q9ZEM7), ALF_STRP1   (P68905), ALF_STRP3   (P0CZ58), 
ALF_STRP6   (Q5XA12), ALF_STRP8   (P68906), ALF_STRPN   (P0A4S1), 
ALF_STRPQ   (P0CZ59), ALF_STRR6   (P0A4S2), ALF_TREPA   (O83668), 
ALF_XANFL   (Q56815), ALF_YEAST   (P14540), GATY_ECO24  (A7ZNR5), 
GATY_ECO27  (B7UFB3), GATY_ECO45  (B7MEF1), GATY_ECO55  (B7L9W7), 
GATY_ECO57  (Q8X4R2), GATY_ECO5E  (B5YV43), GATY_ECO7I  (B7NPN7), 
GATY_ECO8A  (B7M477), GATY_ECOBW  (C4ZSI0), GATY_ECODH  (B1X7I7), 
GATY_ECOHS  (A8A1W1), GATY_ECOK1  (A1ACW2), GATY_ECOL5  (Q0TFZ6), 
GATY_ECOL6  (Q8FFY7), GATY_ECOLC  (B1IYY4), GATY_ECOLI  (P0C8J6), 
GATY_ECOLU  (B7NCC6), GATY_ECOLX  (P0C8J7), GATY_ECOSM  (B1LN92), 
GATY_ECOUT  (Q1R9X7), GATY_SALPA  (Q5PL86), GATY_SALPB  (A9N6Z8), 
GATY_SALPK  (B5BGG5), GATY_SALTI  (Q8XGZ9), GATY_SALTY  (Q7CPQ7), 
GATY_SHIB3  (B2TY92), GATY_SHIBS  (Q323C6), GATY_SHIF8  (Q0T342), 
GATY_SHIFL  (Q83QY5), GATY_SHISS  (Q3Z0B4), IOLJ_BACA2  (A7ZAH2), 
IOLJ_BACHD  (Q9KAH3), IOLJ_BACLD  (Q65D09), IOLJ_BACSU  (P42420), 
KBAY_CITK8  (A8AQ28), KBAY_ECO24  (A7ZS33), KBAY_ECO27  (B7UJ37), 
KBAY_ECO45  (B7MB62), KBAY_ECO55  (B7LH72), KBAY_ECO57  (P0AB76), 
KBAY_ECO5E  (B5YS30), KBAY_ECO7I  (B7NKL0), KBAY_ECO81  (B7N0S6), 
KBAY_ECO8A  (B7M045), KBAY_ECOBW  (C4ZR47), KBAY_ECODH  (B1XGU9), 
KBAY_ECOHS  (A8A4V3), KBAY_ECOK1  (A1AG46), KBAY_ECOL5  (Q0TCW8), 
KBAY_ECOL6  (P0AB75), KBAY_ECOLC  (B1IRH9), KBAY_ECOLI  (P0AB74), 
KBAY_ECOLU  (B7NDC5), KBAY_ECOLX  (Q9KIP8), KBAY_ECOSE  (B6I1L2), 
KBAY_ECOSM  (B1LFP2), KBAY_ECOUT  (Q1R6K0), KBAY_ENT38  (A4WEV6), 
KBAY_ESCF3  (B7LMU4), KBAY_SALAR  (A9MPP7)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ALF2_STAAC  (Q5HE75), ALF2_STAAM  (P67477), ALF2_STAAN  (P99075), 
ALF2_STAAR  (Q6GEV0), ALF2_STAAS  (Q6G7I5), ALF2_STAAW  (P67478), 
ALF2_STAEQ  (Q5HM97), ALF2_STAES  (Q8CNI3), ALF_COCIM   (P0CJ44), 
ALF_MYCPN   (P75089), ALF_THECA   (Q703I2), ALF_UREPA   (Q9PPP3), 
GATY_KLEOX  (Q8VS16), GATY_KLEP7  (A6TEF4), GATY_SALCH  (Q57JK9), 
GATY_SALEP  (B5QZS8), GATY_SALG2  (B5REK6), GATY_SALHS  (B4TIX9), 
GATY_SALNS  (B4T6B9), GATY_SALPC  (C0PZ24), GATY_SALSV  (B4TWB0), 
GATY_SHIDS  (Q32EA9), IOLJ_BACSK  (Q5WKY5)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
ALF2_RHOCA  (P50923), ALF_ANASL   (P83155)
False positive hits (sequences which do not belong to the set under consideration):
BANP_XENLA  (Q5FWL0), CISY_DEIRA  (Q9RWB2)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1B57; 1DOS; 1GVF; 1GYN; 1ZEN; 3C4U; 3C52; 3C56; 3EKL; 3EKZ; 3ELF; 3QM3; 4A21; 4A22; 4DEF; 4DEL;

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