Entry: PS00623

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General information about the entry

Entry name [info] GMC_OXRED_1
Accession [info] PS00623
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00543

Name and characterization of the entry

Description [info] GMC oxidoreductases signature 1.
Pattern [info]
[GA]-[RKNC]-x-[LIVW]-G(2)-[GST](2)-x-[LIVM]-[NH]-x(3)-[FYWA]-x(2)-[PAG]-
x(5)-[DNESHQA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 151 in 151 different sequences
Number of true positive hits 151 in 151 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 32
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.51 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
151 sequences

ALKJ_PSEOL  (Q00593), ALKJ_PSEPU  (Q9WWW2), ALOX1_PICP7 (F2QY27), 
ALOX1_PICPG (P04842), ALOX2_PICP7 (F2R038), ALOX2_PICPG (C4R702), 
ALOX_CANBO  (Q00922), ALOX_PICAN  (P04841), BETA1_CHRSD (Q1QXE1), 
BETA2_CHRSD (Q9L4K0), BETA_ACIAD  (Q6FDF9), BETA_ACIB3  (B7GYG5), 
BETA_ACIB5  (B7I895), BETA_ACIBC  (B2HV79), BETA_ACIBS  (B0VST3), 
BETA_ACIBY  (B0V945), BETA_AGRRK  (B9JBA2), BETA_AGRT5  (Q8UH55), 
BETA_BRUC2  (A9M9H8), BETA_BRUME  (Q8YFY2), BETA_BRUO2  (A5VPA6), 
BETA_BRUSI  (B0CKN4), BETA_BRUSU  (Q8G1Z8), BETA_BURA4  (B1Z034), 
BETA_BURCA  (Q1BQE2), BETA_BURCC  (B1K707), BETA_BURCH  (A0B2F7), 
BETA_BURCJ  (B4EHJ2), BETA_BURCM  (Q0B711), BETA_BURM1  (A9AMZ9), 
BETA_BURMA  (Q62CH8), BETA_BURP1  (Q3JLL7), BETA_BURP8  (B2JS89), 
BETA_BURPP  (B2TCJ8), BETA_BURPS  (Q63KK7), BETA_BURS3  (Q39A44), 
BETA_BURTA  (Q2T6D0), BETA_BURVG  (A4JJG6), BETA_BURXL  (Q13NG7), 
BETA_CITK8  (A8AJN0), BETA_CROS8  (A7MFA8), BETA_ECO24  (A7ZI50), 
BETA_ECO27  (B7UJG4), BETA_ECO45  (B7MCD0), BETA_ECO55  (B7L439), 
BETA_ECO57  (Q8X6C6), BETA_ECO5E  (B5Z1R0), BETA_ECO8A  (B7M2V5), 
BETA_ECODH  (B1XE52), BETA_ECOHS  (A7ZWV4), BETA_ECOL5  (Q0TKW1), 
BETA_ECOL6  (Q8FKI9), BETA_ECOLC  (B1J0W6), BETA_ECOLI  (P17444), 
BETA_ECOLU  (B7N8L3), BETA_ECOSE  (B6I074), BETA_ECOSM  (B1LIJ7), 
BETA_ECOUT  (Q1RFM3), BETA_KLEP3  (B5Y008), BETA_KLEP7  (A6T613), 
BETA_OCHA4  (A6X2G7), BETA_PECAS  (Q6D6D9), BETA_PECCP  (C6DKY4), 
BETA_PHOPR  (Q6LGH5), BETA_PROMH  (B4EX94), BETA_PSE14  (Q48CM7), 
BETA_PSEA7  (A6VEI3), BETA_PSEA8  (B7V5R3), BETA_PSEAB  (Q02DZ0), 
BETA_PSEAE  (Q9HTJ2), BETA_PSEE4  (Q1IG70), BETA_PSEF5  (Q4K4K7), 
BETA_PSEFS  (C3K3D3), BETA_PSEMY  (A4XPI5), BETA_PSEP1  (A5WA97), 
BETA_PSEPF  (Q3K5H3), BETA_PSEPG  (B0KN19), BETA_PSEPK  (Q88CW6), 
BETA_PSESM  (Q88AE7), BETA_PSEU2  (Q4ZM63), BETA_RHIE6  (B3PTE0), 
BETA_RHIEC  (Q2KB43), BETA_RHIL3  (Q1MJU4), BETA_RHILO  (Q985M5), 
BETA_RHILW  (B5ZUG2), BETA_RHIME  (P54223), BETA_RHISN  (C3MIE4), 
BETA_SERP5  (A8GBX9), BETA_SHIF8  (Q0T7N0), BETA_SINMW  (A6U6Y8), 
BETA_STAA1  (A7X6Z3), BETA_STAA2  (A6U4Z2), BETA_STAA3  (Q2FDP9), 
BETA_STAA8  (Q2FV11), BETA_STAA9  (A5IW37), BETA_STAAB  (Q2YWJ5), 
BETA_STAAC  (Q5HCU1), BETA_STAAE  (A6QK99), BETA_STAAM  (P60336), 
BETA_STAAN  (P60337), BETA_STAAR  (Q6GDJ1), BETA_STAAS  (Q6G664), 
BETA_STAAT  (A8Z5A4), BETA_STAAW  (Q8NUM0), BETA_STAEQ  (Q5HL11), 
BETA_STAES  (Q8CMY2), BETA_STAHJ  (Q4L9D7), BETA_STAS1  (Q4A0Q1), 
BETA_STAXY  (Q9X2M2), BETA_STRM5  (B4SHV9), BETA_STRMK  (B2FQ89), 
BETA_VIBCB  (A7N2P9), BETA_VIBVU  (Q8D3K2), BETA_VIBVY  (Q7MF12), 
BETA_XANAC  (Q8PPG8), BETA_XANC5  (Q3BXK8), BETA_XANC8  (Q4UYN5), 
BETA_XANCB  (B0RNU9), BETA_XANCP  (Q8P5D7), BETA_YERP3  (A7FKL6), 
BETA_YERPA  (Q1C932), BETA_YERPB  (B2K8U4), BETA_YERPE  (Q8ZGW0), 
BETA_YERPN  (Q1CFR7), BETA_YERPP  (A4TNP2), BETA_YERPS  (Q66D54), 
BETA_YERPY  (B1JSR0), CDH_PHACH   (Q01738), CHDH_HUMAN  (Q8NE62), 
CHDH_MOUSE  (Q8BJ64), CHDH_RAT    (Q6UPE0), CHOD_BREST  (P22637), 
CHOD_STRS0  (P12676), DHGL_DROME  (P18173), DHGL_DROPS  (P18172), 
GOX_ASPNG   (P13006), GOX_PENAG   (P81156), GOX_TALFL   (Q92452), 
MDL1_PRUDU  (O24243), MDL1_PRUSE  (P52706), MDL2_PRUDU  (Q945K2), 
MDL2_PRUSE  (O50048), MDL3_PRUSE  (P52707), MDLL_ARATH  (Q9SSM2), 
PNO_MICLT   (Q9AJD6), SDH_GLUOY   (Q47944), Y1279_MYCTO (P9WMV4), 
Y1279_MYCTU (P9WMV5), Y1310_MYCBO (P64264), Y4NJ_RHISN  (P55582), 
YTH2_RHOER  (P46371)
» More

UniProtKB/Swiss-Prot
False negative sequences
32 sequences

AFLK_ASPPA  (Q12062), CHOD_MYCTO  (P9WMV8), CHOD_MYCTU  (P9WMV9), 
CHOX_ARTGO  (Q7X2H8), FAO1_ARATH  (Q9ZWB9), FAO1_LOTJA  (B5WWZ8), 
FAO2_LOTJA  (B5WWZ9), FAO3_ARATH  (Q9LW56), FAO4A_ARATH (O65709), 
FAO4B_ARATH (Q94BP3), FDHL_GLUJA  (M1VMF7), GADH1_PANCY (O34214), 
HTH_ARATH   (Q9S746), LIVQ_STRLV  (Q2MF66), MDL4_PRUSE  (O82784), 
NEOG_STRFR  (Q53U15), NINAG_DROME (Q9VGP2), P2OX_EMENI  (Q5B2E9), 
P2OX_LYOSH  (Q75ZP8), P2OX_PENSG  (Q8J136), P2OX_PHACH  (Q6QWR1), 
P2OX_PHLGI  (Q6UG02), P2OX_TRAHI  (P59097), P2OX_TRAPU  (Q5G234), 
P2OX_TRAVE  (P79076), P2OX_TRIMT  (Q8J2V8), Y492_MYCTO  (P9WMV6), 
Y492_MYCTU  (P9WMV7), YL128_MIMIV (Q5UPK7), YL894_MIMIV (Q5UQZ1), 
YR135_MIMIV (Q5UPL2), YR832_MIMIV (Q5UQH9)
» More

PDB
[Detailed view]
28 PDB

1B4V; 1B8S; 1CBO; 1CC2; 1CF3; 1COY; 1GAL; 1GPE; 1IJH; 1JU2; 1KDG; 1MXT; 1N1P; 1N4U; 1N4V; 1N4W; 1NAA; 2GEW; 3B3R; 3B6D; 3CNJ; 3COX; 3GDN; 3GDP; 3GYI; 3GYJ; 3QVP; 3QVR
» More

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