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Entry: PS00624

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General information about the entry

Entry name [info] GMC_OXRED_2
Accession [info] PS00624
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2001 (DATA UPDATE); DEC-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00543

Name and characterization of the entry

Description [info] GMC oxidoreductases signature 2.
Pattern [info]
[GS]-[PSTA]-x(2)-[ST]-[PS]-x-[LIVM](2)-x(2)-S-G-[LIVM]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_01 which contains 547'357 sequence entries.


Total number of hits 150 in 150 different sequences
Number of true positive hits 150 in 150 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 34
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 81.52 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
150 sequences

ALKJ_PSEOL  (Q00593), ALKJ_PSEPU  (Q9WWW2), ALOX_CANBO  (Q00922), 
ALOX_PICAN  (P04841), BETA1_CHRSD (Q1QXE1), BETA2_CHRSD (Q9L4K0), 
BETA_ACIAD  (Q6FDF9), BETA_ACIB3  (B7GYG5), BETA_ACIB5  (B7I895), 
BETA_ACIBC  (B2HV79), BETA_ACIBS  (B0VST3), BETA_ACIBY  (B0V945), 
BETA_AGRRK  (B9JBA2), BETA_AGRT5  (Q8UH55), BETA_BRUC2  (A9M9H8), 
BETA_BRUME  (Q8YFY2), BETA_BRUO2  (A5VPA6), BETA_BRUSI  (B0CKN4), 
BETA_BRUSU  (Q8G1Z8), BETA_BURA4  (B1Z034), BETA_BURCA  (Q1BQE2), 
BETA_BURCC  (B1K707), BETA_BURCH  (A0B2F7), BETA_BURCJ  (B4EHJ2), 
BETA_BURCM  (Q0B711), BETA_BURL3  (Q39A44), BETA_BURM1  (A9AMZ9), 
BETA_BURMA  (Q62CH8), BETA_BURP1  (Q3JLL7), BETA_BURP8  (B2JS89), 
BETA_BURPP  (B2TCJ8), BETA_BURPS  (Q63KK7), BETA_BURTA  (Q2T6D0), 
BETA_BURVG  (A4JJG6), BETA_BURXL  (Q13NG7), BETA_CITK8  (A8AJN0), 
BETA_CROS8  (A7MFA8), BETA_ECO24  (A7ZI50), BETA_ECO27  (B7UJG4), 
BETA_ECO45  (B7MCD0), BETA_ECO55  (B7L439), BETA_ECO57  (Q8X6C6), 
BETA_ECO5E  (B5Z1R0), BETA_ECO8A  (B7M2V5), BETA_ECODH  (B1XE52), 
BETA_ECOHS  (A7ZWV4), BETA_ECOL5  (Q0TKW1), BETA_ECOL6  (Q8FKI9), 
BETA_ECOLC  (B1J0W6), BETA_ECOLI  (P17444), BETA_ECOLU  (B7N8L3), 
BETA_ECOSE  (B6I074), BETA_ECOSM  (B1LIJ7), BETA_ECOUT  (Q1RFM3), 
BETA_KLEP3  (B5Y008), BETA_KLEP7  (A6T613), BETA_OCHA4  (A6X2G7), 
BETA_PECAS  (Q6D6D9), BETA_PECCP  (C6DKY4), BETA_PHOPR  (Q6LGH5), 
BETA_PROMH  (B4EX94), BETA_PSE14  (Q48CM7), BETA_PSEA7  (A6VEI3), 
BETA_PSEA8  (B7V5R3), BETA_PSEAB  (Q02DZ0), BETA_PSEAE  (Q9HTJ2), 
BETA_PSEE4  (Q1IG70), BETA_PSEF5  (Q4K4K7), BETA_PSEFS  (C3K3D3), 
BETA_PSEMY  (A4XPI5), BETA_PSEP1  (A5WA97), BETA_PSEPF  (Q3K5H3), 
BETA_PSEPG  (B0KN19), BETA_PSEPK  (Q88CW6), BETA_PSESM  (Q88AE7), 
BETA_PSEU2  (Q4ZM63), BETA_RHIE6  (B3PTE0), BETA_RHIEC  (Q2KB43), 
BETA_RHIL3  (Q1MJU4), BETA_RHILO  (Q985M5), BETA_RHILW  (B5ZUG2), 
BETA_RHIME  (P54223), BETA_RHISN  (C3MIE4), BETA_SERP5  (A8GBX9), 
BETA_SHIF8  (Q0T7N0), BETA_SINMW  (A6U6Y8), BETA_STAA1  (A7X6Z3), 
BETA_STAA2  (A6U4Z2), BETA_STAA3  (Q2FDP9), BETA_STAA8  (Q2FV11), 
BETA_STAA9  (A5IW37), BETA_STAAB  (Q2YWJ5), BETA_STAAC  (Q5HCU1), 
BETA_STAAE  (A6QK99), BETA_STAAM  (P60336), BETA_STAAN  (P60337), 
BETA_STAAR  (Q6GDJ1), BETA_STAAS  (Q6G664), BETA_STAAT  (A8Z5A4), 
BETA_STAAW  (Q8NUM0), BETA_STAEQ  (Q5HL11), BETA_STAES  (Q8CMY2), 
BETA_STAHJ  (Q4L9D7), BETA_STAS1  (Q4A0Q1), BETA_STAXY  (Q9X2M2), 
BETA_STRM5  (B4SHV9), BETA_STRMK  (B2FQ89), BETA_XANAC  (Q8PPG8), 
BETA_XANC5  (Q3BXK8), BETA_XANC8  (Q4UYN5), BETA_XANCB  (B0RNU9), 
BETA_XANCP  (Q8P5D7), BETA_YERP3  (A7FKL6), BETA_YERPA  (Q1C932), 
BETA_YERPB  (B2K8U4), BETA_YERPE  (Q8ZGW0), BETA_YERPN  (Q1CFR7), 
BETA_YERPP  (A4TNP2), BETA_YERPS  (Q66D54), BETA_YERPY  (B1JSR0), 
CDH_PHACH   (Q01738), CHDH_HUMAN  (Q8NE62), CHDH_MOUSE  (Q8BJ64), 
CHDH_RAT    (Q6UPE0), CHOX_ARTGO  (Q7X2H8), DHGL_DROME  (P18173), 
DHGL_DROPS  (P18172), GOX_ASPNG   (P13006), GOX_PENAG   (P81156), 
GOX_TALFL   (Q92452), HTH_ARATH   (Q9S746), MDL1_PRUDU  (O24243), 
MDL1_PRUSE  (P52706), MDL2_PRUDU  (Q945K2), MDL2_PRUSE  (O50048), 
MDL3_PRUSE  (P52707), MDL4_PRUSE  (O82784), MDLL_ARATH  (Q9SSM2), 
PNO_MICLT   (Q9AJD6), SDH_GLUOY   (Q47944), Y1279_MYCTO (P9WMV4), 
Y1279_MYCTU (P9WMV5), Y1310_MYCBO (P64264), Y492_MYCTO  (P9WMV6), 
Y492_MYCTU  (P9WMV7), YL128_MIMIV (Q5UPK7), YL894_MIMIV (Q5UQZ1), 
YR135_MIMIV (Q5UPL2), YR832_MIMIV (Q5UQH9), YTH2_RHOER  (P46371)
» More

UniProtKB/Swiss-Prot
False negative sequences
34 sequences

AFLK_ASPPA  (Q12062), BETA_VIBCB  (A7N2P9), BETA_VIBVU  (Q8D3K2), 
BETA_VIBVY  (Q7MF12), CHOD_BREST  (P22637), CHOD_MYCTO  (P9WMV8), 
CHOD_MYCTU  (P9WMV9), CHOD_STRS0  (P12676), FAO1_ARATH  (Q9ZWB9), 
FAO1_LOTJA  (B5WWZ8), FAO2_LOTJA  (B5WWZ9), FAO3_ARATH  (Q9LW56), 
FAO4A_ARATH (O65709), FAO4B_ARATH (Q94BP3), FDHL_GLUJA  (M1VMF7), 
GADH1_PANCY (O34214), LIVQ_STRLV  (Q2MF66), NEOG_STRFR  (Q53U15), 
NINAG_DROME (Q9VGP2), P2OX_EMENI  (Q5B2E9), P2OX_LYOSH  (Q75ZP8), 
P2OX_PENSG  (Q8J136), P2OX_PHACH  (Q6QWR1), P2OX_PHLGI  (Q6UG02), 
P2OX_TRAHI  (P59097), P2OX_TRAPU  (Q5G234), P2OX_TRAVE  (P79076), 
P2OX_TRIMT  (Q8J2V8), PDH1_AGABI  (Q3L1D1), PDH1_AGACM  (V5NDL4), 
PDH1_AGAXA  (V5NC32), PDH1_LEUMG  (Q3L245), PDH2_LEUMG  (Q3L243), 
PDH3_LEUMG  (Q0R4L2)
» More

PDB
[Detailed view]
14 PDB

1CF3; 1GAL; 1GPE; 1JU2; 1KDG; 1NAA; 2JBV; 3GDN; 3GDP; 3LJP; 3NNE; 3QVP; 3QVR; 4MJW
» More

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