Entry: PS00624

General information about the entry

Entry name [info] GMC_OXRED_2
Accession [info] PS00624
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2001 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00543

Name and characterization of the entry

Description [info] GMC oxidoreductases signature 2.
Pattern [info]
[GS]-[PSTA]-x(2)-[ST]-[PS]-x-[LIVM](2)-x(2)-S-G-[LIVM]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 150 in 150 different sequences
Number of true positive hits 150 in 150 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 34
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 81.52 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
150 sequences

ALKJ_PSEOL  (Q00593), ALKJ_PSEPU  (Q9WWW2), ALOX_CANBO  (Q00922), 
ALOX_PICAN  (P04841), BETA1_CHRSD (Q1QXE1), BETA2_CHRSD (Q9L4K0), 
BETA_ACIAD  (Q6FDF9), BETA_ACIB3  (B7GYG5), BETA_ACIB5  (B7I895), 
BETA_ACIBC  (B2HV79), BETA_ACIBS  (B0VST3), BETA_ACIBY  (B0V945), 
BETA_AGRFC  (Q8UH55), BETA_AGRRK  (B9JBA2), BETA_BRUC2  (A9M9H8), 
BETA_BRUME  (Q8YFY2), BETA_BRUO2  (A5VPA6), BETA_BRUSI  (B0CKN4), 
BETA_BRUSU  (Q8G1Z8), BETA_BURA4  (B1Z034), BETA_BURCA  (Q1BQE2), 
BETA_BURCC  (B1K707), BETA_BURCH  (A0B2F7), BETA_BURCJ  (B4EHJ2), 
BETA_BURCM  (Q0B711), BETA_BURL3  (Q39A44), BETA_BURM1  (A9AMZ9), 
BETA_BURMA  (Q62CH8), BETA_BURP1  (Q3JLL7), BETA_BURP8  (B2JS89), 
BETA_BURPP  (B2TCJ8), BETA_BURPS  (Q63KK7), BETA_BURTA  (Q2T6D0), 
BETA_BURVG  (A4JJG6), BETA_BURXL  (Q13NG7), BETA_CITK8  (A8AJN0), 
BETA_CROS8  (A7MFA8), BETA_ECO24  (A7ZI50), BETA_ECO27  (B7UJG4), 
BETA_ECO45  (B7MCD0), BETA_ECO55  (B7L439), BETA_ECO57  (Q8X6C6), 
BETA_ECO5E  (B5Z1R0), BETA_ECO8A  (B7M2V5), BETA_ECODH  (B1XE52), 
BETA_ECOHS  (A7ZWV4), BETA_ECOL5  (Q0TKW1), BETA_ECOL6  (Q8FKI9), 
BETA_ECOLC  (B1J0W6), BETA_ECOLI  (P17444), BETA_ECOLU  (B7N8L3), 
BETA_ECOSE  (B6I074), BETA_ECOSM  (B1LIJ7), BETA_ECOUT  (Q1RFM3), 
BETA_KLEP3  (B5Y008), BETA_KLEP7  (A6T613), BETA_OCHA4  (A6X2G7), 
BETA_PECAS  (Q6D6D9), BETA_PECCP  (C6DKY4), BETA_PHOPR  (Q6LGH5), 
BETA_PROMH  (B4EX94), BETA_PSE14  (Q48CM7), BETA_PSEA7  (A6VEI3), 
BETA_PSEA8  (B7V5R3), BETA_PSEAB  (Q02DZ0), BETA_PSEAE  (Q9HTJ2), 
BETA_PSEE4  (Q1IG70), BETA_PSEF5  (Q4K4K7), BETA_PSEFS  (C3K3D3), 
BETA_PSEMY  (A4XPI5), BETA_PSEP1  (A5WA97), BETA_PSEPF  (Q3K5H3), 
BETA_PSEPG  (B0KN19), BETA_PSEPK  (Q88CW6), BETA_PSESM  (Q88AE7), 
BETA_PSEU2  (Q4ZM63), BETA_RHIE6  (B3PTE0), BETA_RHIEC  (Q2KB43), 
BETA_RHIL3  (Q1MJU4), BETA_RHILO  (Q985M5), BETA_RHILW  (B5ZUG2), 
BETA_RHIME  (P54223), BETA_RHISN  (C3MIE4), BETA_SERP5  (A8GBX9), 
BETA_SHIF8  (Q0T7N0), BETA_SINMW  (A6U6Y8), BETA_STAA1  (A7X6Z3), 
BETA_STAA2  (A6U4Z2), BETA_STAA3  (Q2FDP9), BETA_STAA8  (Q2FV11), 
BETA_STAA9  (A5IW37), BETA_STAAB  (Q2YWJ5), BETA_STAAC  (Q5HCU1), 
BETA_STAAE  (A6QK99), BETA_STAAM  (P60336), BETA_STAAN  (P60337), 
BETA_STAAR  (Q6GDJ1), BETA_STAAS  (Q6G664), BETA_STAAT  (A8Z5A4), 
BETA_STAAW  (Q8NUM0), BETA_STAEQ  (Q5HL11), BETA_STAES  (Q8CMY2), 
BETA_STAHJ  (Q4L9D7), BETA_STAS1  (Q4A0Q1), BETA_STAXY  (Q9X2M2), 
BETA_STRM5  (B4SHV9), BETA_STRMK  (B2FQ89), BETA_XANAC  (Q8PPG8), 
BETA_XANC5  (Q3BXK8), BETA_XANC8  (Q4UYN5), BETA_XANCB  (B0RNU9), 
BETA_XANCP  (Q8P5D7), BETA_YERP3  (A7FKL6), BETA_YERPA  (Q1C932), 
BETA_YERPB  (B2K8U4), BETA_YERPE  (Q8ZGW0), BETA_YERPN  (Q1CFR7), 
BETA_YERPP  (A4TNP2), BETA_YERPS  (Q66D54), BETA_YERPY  (B1JSR0), 
CDH_PHACH   (Q01738), CHDH_HUMAN  (Q8NE62), CHDH_MOUSE  (Q8BJ64), 
CHDH_RAT    (Q6UPE0), CHOX_ARTGO  (Q7X2H8), DHGL_DROME  (P18173), 
DHGL_DROPS  (P18172), GOX_ASPNG   (P13006), GOX_PENAG   (P81156), 
GOX_TALFL   (Q92452), HTH_ARATH   (Q9S746), MDL1_PRUDU  (O24243), 
MDL1_PRUSE  (P52706), MDL2_PRUDU  (Q945K2), MDL2_PRUSE  (O50048), 
MDL3_PRUSE  (P52707), MDL4_PRUSE  (O82784), MDLL_ARATH  (Q9SSM2), 
PNO_MICLT   (Q9AJD6), SDH_GLUOY   (Q47944), Y1279_MYCTO (P9WMV4), 
Y1279_MYCTU (P9WMV5), Y1310_MYCBO (P64264), Y492_MYCTO  (P9WMV6), 
Y492_MYCTU  (P9WMV7), YL128_MIMIV (Q5UPK7), YL894_MIMIV (Q5UQZ1), 
YR135_MIMIV (Q5UPL2), YR832_MIMIV (Q5UQH9), YTH2_RHOER  (P46371)
» More

UniProtKB/Swiss-Prot
False negative sequences
34 sequences

AFLK_ASPPA  (Q12062), BETA_VIBCB  (A7N2P9), BETA_VIBVU  (Q8D3K2), 
BETA_VIBVY  (Q7MF12), CHOD_BREST  (P22637), CHOD_MYCTO  (P9WMV8), 
CHOD_MYCTU  (P9WMV9), CHOD_STRS0  (P12676), FAO1_ARATH  (Q9ZWB9), 
FAO1_LOTJA  (B5WWZ8), FAO2_LOTJA  (B5WWZ9), FAO3_ARATH  (Q9LW56), 
FAO4A_ARATH (O65709), FAO4B_ARATH (Q94BP3), FDHL_GLUJA  (M1VMF7), 
GADH1_PANCY (O34214), LIVQ_STRLV  (Q2MF66), NEOG_STRFR  (Q53U15), 
NINAG_DROME (Q9VGP2), P2OX_EMENI  (Q5B2E9), P2OX_LYOSH  (Q75ZP8), 
P2OX_PENSG  (Q8J136), P2OX_PHACH  (Q6QWR1), P2OX_PHLGI  (Q6UG02), 
P2OX_TRAHI  (P59097), P2OX_TRAPU  (Q5G234), P2OX_TRAVE  (P79076), 
P2OX_TRIMT  (Q8J2V8), PDH1_AGABI  (Q3L1D1), PDH1_AGACM  (V5NDL4), 
PDH1_AGAXA  (V5NC32), PDH1_LEUMG  (Q3L245), PDH2_LEUMG  (Q3L243), 
PDH3_LEUMG  (Q0R4L2)
» More

PDB
[Detailed view]
16 PDB

1CF3; 1GAL; 1GPE; 1JU2; 1KDG; 1NAA; 2JBV; 3GDN; 3GDP; 3LJP; 3NNE; 3QVP; 3QVR; 4MJW; 4Z24; 4Z26
» More

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